Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G1181 Cannabis sativa HOM05D004893 ORTHO05D006320 3.2e-113 411.8 206 100.0
CANSAT11G1129 Cannabis sativa HOM05D004893 ORTHO05D006320 3.4e-107 391.7 210 95.2
Ciclev10007405m.g Citrus clementina HOM05D004893 ORTHO05D006320 5.0e-58 228.4 204 59.8
FAN17G0276 Fragaria x ananassa HOM05D004893 ORTHO05D006320 1.9e-57 226.5 203 57.1
FvH4_4g07920 Fragaria vesca HOM05D004893 ORTHO05D006320 3.2e-57 225.7 203 56.7
Prupe.1G084200 Prunus persica HOM05D004893 ORTHO05D006320 3.2e-57 225.7 208 57.7
FAN12G2097 Fragaria x ananassa HOM05D004893 ORTHO05D006320 7.2e-57 224.6 203 56.2
QL02p098221 Quercus lobata HOM05D004893 ORTHO05D006320 2.1e-56 223.0 204 57.4
Atru.chr7.881 Acer truncatum HOM05D004893 ORTHO05D006320 4.7e-56 221.9 214 57.5
TWI34G0813 Tripterygium wilfordii HOM05D004893 ORTHO05D006320 4.7e-56 221.9 203 55.7
FAN22G1078 Fragaria x ananassa HOM05D004893 ORTHO05D006320 1.4e-55 220.3 207 56.5
MBI02_g12652_MAGBIO Magnolia biondii HOM05D004893 ORTHO05D006320 1.5e-54 216.9 204 57.4
Lalb_Chr07g0180551 Lupinus albus HOM05D004893 ORTHO05D006320 2.6e-54 216.1 208 57.7
FAN07G0898 Fragaria x ananassa HOM05D004893 ORTHO05D006320 3.3e-54 215.7 209 54.1
Potri.018G091100 Populus trichocarpa HOM05D004893 ORTHO05D006320 5.7e-54 214.9 213 54.5
Potri.006G166500 Populus trichocarpa HOM05D004893 ORTHO05D006320 7.4e-54 214.5 201 56.7
Duzib150G0781 Durio zibethinus HOM05D004893 ORTHO05D006320 9.7e-54 214.2 203 56.7
TAR627G1078 Trochodendron aralioides HOM05D004893 ORTHO05D006320 9.7e-54 214.2 205 55.6
Cfa013310 Carpinus fangiana HOM05D004893 ORTHO05D006320 1.3e-53 213.8 214 54.2
Gohir.A05G004264 Gossypium hirsutum HOM05D004893 ORTHO05D006320 1.3e-53 213.8 206 54.4
RcHm_v2.0_Chr4g0401591 Rosa chinensis HOM05D004893 ORTHO05D006320 1.3e-53 213.8 205 55.1
MD13G1251600 Malus domestica HOM05D004893 ORTHO05D006320 1.7e-53 213.4 200 56.5
Cfa010313 Carpinus fangiana HOM05D004893 ORTHO05D006320 2.2e-53 213.0 214 53.3
ClCG06G013450 Citrullus lanatus HOM05D004893 ORTHO05D006320 2.2e-53 213.0 204 54.9
VMungo1215G1808 Vigna mungo HOM05D004893 ORTHO05D006320 2.2e-53 213.0 200 58.0
Gohir.D05G004900 Gossypium hirsutum HOM05D004893 ORTHO05D006320 2.8e-53 212.6 206 54.9
Lj4g0004814 Lotus japonicus HOM05D004893 ORTHO05D006320 2.8e-53 212.6 200 57.0
Thecc.09G175700 Theobroma cacao HOM05D004893 ORTHO05D006320 8.2e-53 211.1 203 55.7
MELO3C017452.2 Cucumis melo HOM05D004893 ORTHO05D006320 1.1e-52 210.7 204 54.9
CsaV3_1G031710 Cucumis sativus L. HOM05D004893 ORTHO05D006320 2.4e-52 209.5 204 54.4
Gorai.009G004800 Gossypium raimondii HOM05D004893 ORTHO05D006320 2.4e-52 209.5 206 53.9
Hma1.2p1_0321F.1_g124570 Hydrangea macrophylla HOM05D004893 ORTHO05D006320 1.6e-51 206.8 206 53.4
Glyma.17G062200 Glycine max HOM05D004893 ORTHO05D006320 2.2e-50 203.0 200 57.0
Sed0012855 Sechium edule HOM05D004893 ORTHO05D006320 2.2e-50 203.0 205 53.7
Sed0012025 Sechium edule HOM05D004893 ORTHO05D006320 2.9e-50 202.6 205 53.7
Ca_21236_v3 Cicer arietinum L. HOM05D004893 ORTHO05D006320 8.5e-50 201.1 197 51.8
Haze_03433 Corylus avellana HOM05D004893 ORTHO05D006320 8.5e-50 201.1 214 52.3
Glyma.13G097400 Glycine max HOM05D004893 ORTHO05D006320 1.2e-48 197.2 200 54.5
Nn7g38118 Nelumbo nucifera HOM05D004893 ORTHO05D006320 1.2e-48 197.2 203 51.7
GSVIVG01030738001 Vitis vinifera HOM05D004893 ORTHO05D006320 1.6e-48 196.8 206 52.4
CSS0008978 Camellia sinensis var. sinensis HOM05D004893 ORTHO05D006320 2.1e-48 196.4 207 52.2
CSS0040034 Camellia sinensis var. sinensis HOM05D004893 ORTHO05D006320 2.1e-48 196.4 207 52.2
Lj8C187G7 Lonicera japonica HOM05D004893 ORTHO05D006320 2.1e-48 196.4 204 53.4
arahy.Tifrunner.gnm1.ann1.48BVGN Arachis hypogaea HOM05D004893 ORTHO05D006320 3.6e-48 195.7 198 54.0
MSTRG.16114 Avicennia marina HOM05D004893 ORTHO05D006320 4.7e-48 195.3 212 50.5
Manes.06G023100 Manihot esculenta HOM05D004893 ORTHO05D006320 4.7e-48 195.3 207 50.7
Medtr4g127820 Medicago truncatula HOM05D004893 ORTHO05D006320 4.7e-48 195.3 198 52.0
arahy.Tifrunner.gnm1.ann1.B5GTII Arachis hypogaea HOM05D004893 ORTHO05D006320 8.0e-48 194.5 197 53.3
Psat4g012800 Pisum sativum HOM05D004893 ORTHO05D006320 8.0e-48 194.5 197 51.3
PGR044G2140 Punica granatum HOM05D004893 ORTHO05D006320 8.0e-48 194.5 200 54.0
Phvul.003G144100 Phaseolus vulgaris HOM05D004893 ORTHO05D006320 4.0e-47 192.2 200 53.5
Sopen07g034580 Solanum pennellii HOM05D004893 ORTHO05D006320 1.2e-46 190.7 205 52.2
TPR.G5437 Trifolium pratense HOM05D004893 ORTHO05D006320 2.0e-46 189.9 198 50.5
Nitab4.5_0001749g0080 Nicotiana tabacum HOM05D004893 ORTHO05D006320 2.6e-46 189.5 205 50.7
Rhsim13G0225800 Rhododendron simsii HOM05D004893 ORTHO05D006320 2.6e-46 189.5 204 51.5
Solyc07g066410.4 Solanum lycopersicum HOM05D004893 ORTHO05D006320 4.4e-46 188.7 202 52.5
Sabra06G0128100 Salix brachista HOM05D004893 ORTHO05D006320 5.7e-46 188.3 187 53.5
Aqoxy3G03036 Aquilegia oxysepala HOM05D004893 ORTHO05D006320 7.5e-46 188.0 201 50.7
HanXRQChr09g0273501 Helianthus annuus HOM05D004893 ORTHO05D006320 1.3e-45 187.2 200 51.5
EL10Ac6g14738 Beta vulgaris HOM05D004893 ORTHO05D006320 1.7e-45 186.8 206 51.5
BraA07t27976Z Brassica rapa HOM05D004893 ORTHO05D006320 1.7e-45 186.8 197 48.7
COL.COLO4_37741 Corchorus olitorius HOM05D004893 ORTHO05D006320 1.7e-45 186.8 228 46.9
Aa31LG8G15990 Aethionema arabicum HOM05D004893 ORTHO05D006320 2.2e-45 186.4 202 47.5
BcaB03g16682 Brassica carinata HOM05D004893 ORTHO05D006320 3.7e-45 185.7 197 46.7
Sp3g32370 Schrenkiella parvula HOM05D004893 ORTHO05D006320 3.7e-45 185.7 203 48.3
Nitab4.5_0008437g0020 Nicotiana tabacum HOM05D004893 ORTHO05D006320 4.8e-45 185.3 200 51.0
Thhalv10022562m.g Eutrema salsugineum HOM05D004893 ORTHO05D006320 6.3e-45 184.9 209 47.4
Peaxi162Scf00452g00844 Petunia axillaris HOM05D004893 ORTHO05D006320 6.3e-45 184.9 204 50.0
AT2G18900 Arabidopsis thaliana HOM05D004893 ORTHO05D006320 1.1e-44 184.1 209 47.4
A07p01760 Brassica napus HOM05D004893 ORTHO05D006320 1.1e-44 184.1 197 48.2
vmacro21776 Vaccinium macrocarpon HOM05D004893 ORTHO05D006320 1.1e-44 184.1 207 48.8
Eucgr.C02353 Eucalyptus grandis HOM05D004893 ORTHO05D006320 4.1e-44 182.2 210 50.5
PSO782G3725 Papaver somniferum HOM05D004893 ORTHO05D006320 5.3e-44 181.8 199 50.3
AUR62033061 Chenopodium quinoa HOM05D004893 ORTHO05D006320 9.1e-44 181.0 203 50.2
CARHR109460 Cardamine hirsuta HOM05D004893 ORTHO05D006320 1.2e-43 180.6 211 46.4
PSO063G4841 Papaver somniferum HOM05D004893 ORTHO05D006320 1.6e-43 180.3 199 49.7
AL3G53020 Arabidopsis lyrata HOM05D004893 ORTHO05D006320 2.0e-43 179.9 209 46.9
ECA240G4652 Erigeron canadensis HOM05D004893 ORTHO05D006320 2.0e-43 179.9 202 47.0
Carub.0003s3314 Capsella rubella HOM05D004893 ORTHO05D006320 2.7e-43 179.5 209 45.5
AUR62042215 Chenopodium quinoa HOM05D004893 ORTHO05D006320 2.7e-43 179.5 206 48.5
THA.LOC104803489 Tarenaya hassleriana HOM05D004893 ORTHO05D006320 2.7e-43 179.5 203 45.8
BcaC06g36488 Brassica carinata HOM05D004893 ORTHO05D006320 3.5e-43 179.1 197 45.7
C07p03690 Brassica napus HOM05D004893 ORTHO05D006320 3.5e-43 179.1 197 45.7
BolC7t40765H Brassica oleracea HOM05D004893 ORTHO05D006320 3.5e-43 179.1 197 45.7
DCAR_013745 Daucus carota HOM05D004893 ORTHO05D006320 3.5e-43 179.1 201 48.8
Lsat_1_v5_gn_7_72221 Lactuca sativa HOM05D004893 ORTHO05D006320 1.7e-42 176.8 197 50.3
SalBow8G3700 Salvia bowleyana HOM05D004893 ORTHO05D006320 2.2e-42 176.4 199 46.7
Ah.09g231700 Amaranthus hybridus HOM05D004893 ORTHO05D006320 2.9e-42 176.0 206 49.0
Atru.chr13.1778 Acer truncatum HOM05D004893 ORTHO05D006320 1.9e-41 173.3 179 52.5
HPP92_012201 Vanilla planifolia HOM05D004893 ORTHO05D006320 1.9e-41 173.3 200 46.0
Migut.M01562 Erythranthe guttata HOM05D004893 ORTHO05D006320 3.2e-41 172.6 204 47.5
Os12g0609800 Oryza sativa ssp. japonica HOM05D004893 ORTHO05D006320 1.2e-38 164.1 196 46.9
Cc05_g16000 Coffea canephora HOM05D004893 ORTHO05D006320 4.4e-38 162.2 206 47.1
Zm00001eb031520 Zea mays HOM05D004893 ORTHO05D006320 2.2e-37 159.8 199 44.2
unitig_748.g7834 Utricularia gibba HOM05D004893 ORTHO05D006320 3.1e-36 156.0 209 41.1
CDE08G1653 Ceratophyllum demersum HOM05D004893 ORTHO05D006320 1.6e-35 153.7 204 44.6
BcaC04g22880 Brassica carinata HOM05D004893 ORTHO05D006320 4.2e-33 145.6 195 41.5
ATR1098G135 Amborella trichopoda HOM05D004893 ORTHO05D006320 5.5e-33 145.2 211 41.7
C09p14300 Brassica napus HOM05D004893 ORTHO05D006320 3.6e-32 142.5 195 41.0
BolC9t54332H Brassica oleracea HOM05D004893 ORTHO05D006320 3.6e-32 142.5 195 41.0
SGA_v2.0_scaffold186G40224 Striga asiatica HOM05D004893 ORTHO05D006320 2.0e-30 136.7 202 40.1
RcHm_v2.0_Chr4g0401691 Rosa chinensis HOM05D004893 ORTHO05D006320 9.8e-30 134.4 138 51.4
Cpa.g.sc95.47 Carica papaya HOM05D004893 ORTHO05D006320 3.8e-26 122.5 133 51.9
SEGI_38878 Sequoiadendron giganteum HOM05D004893 ORTHO05D006320 1.2e-24 117.5 207 36.2
Dinv42518 Davidia involucrata HOM05D004893 ORTHO05D006320 1.0e-23 114.4 138 47.8
AT3G26480 Arabidopsis thaliana HOM05D004893 ORTHO05D006320 8.3e-21 104.8 193 32.1
Hund06466 Selenicereus undatus HOM05D004893 ORTHO05D006320 1.1e-20 104.4 141 42.6
Carub.0007s0802 Capsella rubella HOM05D004893 ORTHO05D006320 9.2e-20 101.3 195 32.8
Thhalv10024453m.g Eutrema salsugineum HOM05D004893 ORTHO05D006320 1.2e-19 100.9 200 32.5
C01p06460 Brassica napus HOM05D004893 ORTHO05D006320 1.6e-19 100.5 194 33.5
AL7G19230 Arabidopsis lyrata HOM05D004893 ORTHO05D006320 3.9e-18 95.9 194 30.9
BraA09t36855Z Brassica rapa HOM05D004893 ORTHO05D006320 5.6e-17 92.0 112 43.8
CBR_g49376 Chara braunii HOM05D004893 ORTHO05D006320 4.7e-16 89.0 209 27.3
BolC1t00640H Brassica oleracea HOM05D004893 ORTHO05D006320 6.2e-16 88.6 192 31.8
A09p12110 Brassica napus HOM05D004893 ORTHO05D006320 1.1e-15 87.8 112 42.9
EL10Ac6g14737 Beta vulgaris HOM05D004893 ORTHO05D006320 8.9e-15 84.7 67 64.2
Pp3c7_4120 Physcomitrium patens HOM05D004893 ORTHO05D006320 3.7e-13 79.3 218 29.8
BcaB07g31639 Brassica carinata HOM05D004893 ORTHO05D006320 5.4e-12 75.5 182 30.8
BcaC09g52044 Brassica carinata HOM05D004893 ORTHO05D006320 5.4e-12 75.5 194 28.4
Mapoly0156s0021 Marchantia polymorpha HOM05D004893 ORTHO05D006320 7.0e-12 75.1 213 27.7
MBI12_g20565_MAGBIO Magnolia biondii HOM05D004893 ORTHO05D006320 3.5e-11 72.8 65 58.5
AagrBONN_evm.TU.Sc2ySwM_228.3065 Anthoceros agrestis HOM05D004893 ORTHO05D006320 1.2e-08 64.3 202 27.7


User provided reference genes

Program Settings