Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G1121 Cannabis sativa HOM05D004327 ORTHO05D005032 1.2e-209 733.0 389 100.0
Prupe.1G085300 Prunus persica HOM05D004327 ORTHO05D005032 3.6e-182 641.7 389 87.4
MD13G1253000 Malus domestica HOM05D004327 ORTHO05D005032 2.2e-179 632.5 390 86.9
Dinv42719 Davidia involucrata HOM05D004327 ORTHO05D005032 3.2e-175 618.6 386 83.4
CSS0007595 Camellia sinensis var. sinensis HOM05D004327 ORTHO05D005032 2.7e-174 615.5 386 84.5
CiPaw.07G192500 Carya illinoinensis HOM05D004327 ORTHO05D005032 3.9e-173 611.7 390 84.1
ClCG11G012140 Citrullus lanatus HOM05D004327 ORTHO05D005032 3.9e-173 611.7 384 83.6
Hma1.2p1_1025F.1_g249340 Hydrangea macrophylla HOM05D004327 ORTHO05D005032 1.3e-171 606.7 384 83.3
Sed0007507 Sechium edule HOM05D004327 ORTHO05D005032 1.7e-171 606.3 388 81.7
MD16G1257500 Malus domestica HOM05D004327 ORTHO05D005032 3.7e-171 605.1 389 84.3
Thecc.09G176900 Theobroma cacao HOM05D004327 ORTHO05D005032 3.1e-170 602.1 386 83.2
VMungo1215G1888 Vigna mungo HOM05D004327 ORTHO05D005032 3.1e-170 602.1 389 82.5
Manes.14G154300 Manihot esculenta HOM05D004327 ORTHO05D005032 2.6e-169 599.0 386 82.6
GSVIVG01029211001 Vitis vinifera HOM05D004327 ORTHO05D005032 7.7e-169 597.4 384 83.9
Cpa.g.sc233.7 Carica papaya HOM05D004327 ORTHO05D005032 1.7e-168 596.3 368 86.4
Glyma.17G062900 Glycine max HOM05D004327 ORTHO05D005032 1.7e-168 596.3 389 81.5
TAR343G0001 Trochodendron aralioides HOM05D004327 ORTHO05D005032 1.7e-168 596.3 386 81.3
Atru.chr7.613 Acer truncatum HOM05D004327 ORTHO05D005032 8.5e-168 594.0 388 82.5
Potri.018G092000 Populus trichocarpa HOM05D004327 ORTHO05D005032 1.5e-167 593.2 386 83.4
CsaV3_2G008420 Cucumis sativus L. HOM05D004327 ORTHO05D005032 1.9e-167 592.8 388 80.9
Phvul.003G145300 Phaseolus vulgaris HOM05D004327 ORTHO05D005032 2.5e-167 592.4 389 81.5
Dinv43382 Davidia involucrata HOM05D004327 ORTHO05D005032 5.5e-167 591.3 365 84.7
Medtr4g127970 Medicago truncatula HOM05D004327 ORTHO05D005032 1.6e-166 589.7 367 84.7
Nn8g40460 Nelumbo nucifera HOM05D004327 ORTHO05D005032 2.1e-166 589.3 386 80.3
Lalb_Chr07g0180501 Lupinus albus HOM05D004327 ORTHO05D005032 6.1e-166 587.8 382 82.2
QL02p097831 Quercus lobata HOM05D004327 ORTHO05D005032 3.0e-165 585.5 384 82.3
MSTRG.26218 Avicennia marina HOM05D004327 ORTHO05D005032 6.8e-165 584.3 381 81.1
arahy.Tifrunner.gnm1.ann1.UF0NDT Arachis hypogaea HOM05D004327 ORTHO05D005032 8.8e-165 583.9 367 85.0
RcHm_v2.0_Chr4g0402371 Rosa chinensis HOM05D004327 ORTHO05D005032 1.5e-164 583.2 390 81.8
Lj4g0017259 Lotus japonicus HOM05D004327 ORTHO05D005032 2.0e-164 582.8 364 84.9
Glyma.13G096600 Glycine max HOM05D004327 ORTHO05D005032 3.4e-164 582.0 365 84.1
Duzib150G0132 Durio zibethinus HOM05D004327 ORTHO05D005032 4.4e-164 581.6 386 80.8
arahy.Tifrunner.gnm1.ann1.IHC8NS Arachis hypogaea HOM05D004327 ORTHO05D005032 5.7e-164 581.3 367 84.7
Gohir.A08G084200 Gossypium hirsutum HOM05D004327 ORTHO05D005032 2.8e-163 578.9 386 81.1
FAN22G1646 Fragaria x ananassa HOM05D004327 ORTHO05D005032 8.3e-163 577.4 390 80.0
Gohir.D08G093800 Gossypium hirsutum HOM05D004327 ORTHO05D005032 1.4e-162 576.6 386 80.8
COL.COLO4_37716 Corchorus olitorius HOM05D004327 ORTHO05D005032 2.4e-162 575.9 383 81.5
FvH4_4g08170 Fragaria vesca HOM05D004327 ORTHO05D005032 7.0e-162 574.3 389 79.7
TPR.G5449 Trifolium pratense HOM05D004327 ORTHO05D005032 1.6e-161 573.2 389 80.2
Eucgr.C00153 Eucalyptus grandis HOM05D004327 ORTHO05D005032 2.0e-161 572.8 367 83.7
Duzib168G0099 Durio zibethinus HOM05D004327 ORTHO05D005032 1.7e-160 569.7 388 79.9
PSO063G6085 Papaver somniferum HOM05D004327 ORTHO05D005032 2.2e-160 569.3 389 77.6
Cc06_g13210 Coffea canephora HOM05D004327 ORTHO05D005032 5.0e-160 568.2 384 79.7
Gorai.004G099500 Gossypium raimondii HOM05D004327 ORTHO05D005032 4.2e-159 565.1 395 78.2
Migut.K00240 Erythranthe guttata HOM05D004327 ORTHO05D005032 7.2e-159 564.3 389 76.9
DCAR_017971 Daucus carota HOM05D004327 ORTHO05D005032 1.2e-158 563.5 365 80.8
Ciclev10008675m.g Citrus clementina HOM05D004327 ORTHO05D005032 2.1e-158 562.8 384 79.2
vmacro06012 Vaccinium macrocarpon HOM05D004327 ORTHO05D005032 6.1e-158 561.2 493 63.9
Ca_21229_v3 Cicer arietinum L. HOM05D004327 ORTHO05D005032 8.0e-158 560.8 374 81.0
PSO170G3199 Papaver somniferum HOM05D004327 ORTHO05D005032 2.3e-157 559.3 389 76.6
Psat4g169000 Pisum sativum HOM05D004327 ORTHO05D005032 9.8e-156 553.9 350 83.7
ATR0580G352 Amborella trichopoda HOM05D004327 ORTHO05D005032 8.3e-155 550.8 384 76.0
Sabra18G0079100 Salix brachista HOM05D004327 ORTHO05D005032 1.1e-154 550.4 384 79.9
HanXRQChr11g0322421 Helianthus annuus HOM05D004327 ORTHO05D005032 4.1e-154 548.5 387 76.2
ECA240G0157 Erigeron canadensis HOM05D004327 ORTHO05D005032 4.5e-153 545.0 370 79.2
Rhsim03G0264600 Rhododendron simsii HOM05D004327 ORTHO05D005032 1.0e-152 543.9 366 79.5
MSTRG.6222 Avicennia marina HOM05D004327 ORTHO05D005032 3.8e-152 542.0 375 77.9
Solyc07g019530.3 Solanum lycopersicum HOM05D004327 ORTHO05D005032 1.5e-151 540.0 388 74.5
Sopen07g008040 Solanum pennellii HOM05D004327 ORTHO05D005032 1.5e-151 540.0 388 74.5
AL8G33390 Arabidopsis lyrata HOM05D004327 ORTHO05D005032 5.5e-151 538.1 386 75.4
SGA_v2.0_scaffold66G22446 Striga asiatica HOM05D004327 ORTHO05D005032 7.2e-151 537.7 386 76.7
Actinidia17317 Actinidia chinensis HOM05D004327 ORTHO05D005032 1.2e-150 537.0 381 77.2
PGR142G4100 Punica granatum HOM05D004327 ORTHO05D005032 1.2e-150 537.0 382 75.9
Migut.J01485 Erythranthe guttata HOM05D004327 ORTHO05D005032 2.8e-150 535.8 357 79.8
Sc14g0001280 Simmondsia chinensis HOM05D004327 ORTHO05D005032 2.8e-150 535.8 351 81.5
CARHR271210 Cardamine hirsuta HOM05D004327 ORTHO05D005032 6.1e-150 534.6 386 74.9
Carub.0008s1793 Capsella rubella HOM05D004327 ORTHO05D005032 1.0e-149 533.9 386 74.9
THA.LOC104811786 Tarenaya hassleriana HOM05D004327 ORTHO05D005032 1.8e-149 533.1 366 78.4
MBI14_g17374_MAGBIO Magnolia biondii HOM05D004327 ORTHO05D005032 2.3e-149 532.7 386 73.6
AT5G57410 Arabidopsis thaliana HOM05D004327 ORTHO05D005032 5.2e-149 531.6 388 74.7
Thhalv10013843m.g Eutrema salsugineum HOM05D004327 ORTHO05D005032 1.3e-147 526.9 365 77.8
Sp6g19130 Schrenkiella parvula HOM05D004327 ORTHO05D005032 3.7e-147 525.4 386 74.9
BolC3t13942H Brassica oleracea HOM05D004327 ORTHO05D005032 4.9e-147 525.0 373 75.6
Peaxi162Scf00231g00726 Petunia axillaris HOM05D004327 ORTHO05D005032 1.4e-146 523.5 389 73.5
BraA03t10592Z Brassica rapa HOM05D004327 ORTHO05D005032 4.1e-146 521.9 373 75.3
THA.LOC104813521 Tarenaya hassleriana HOM05D004327 ORTHO05D005032 7.0e-146 521.2 419 70.6
Hund09030 Selenicereus undatus HOM05D004327 ORTHO05D005032 1.2e-145 520.4 365 77.3
ECA236G3505 Erigeron canadensis HOM05D004327 ORTHO05D005032 3.5e-145 518.8 369 75.9
BcaB01g04457 Brassica carinata HOM05D004327 ORTHO05D005032 7.8e-145 517.7 353 78.2
Aa31LG3G13300 Aethionema arabicum HOM05D004327 ORTHO05D005032 1.0e-144 517.3 425 68.5
CDE04G3746 Ceratophyllum demersum HOM05D004327 ORTHO05D005032 1.0e-144 517.3 368 73.9
Sed0007415 Sechium edule HOM05D004327 ORTHO05D005032 2.3e-144 516.2 386 72.5
Dinv41244 Davidia involucrata HOM05D004327 ORTHO05D005032 3.9e-144 515.4 319 87.5
Aqoxy7G03046 Aquilegia oxysepala HOM05D004327 ORTHO05D005032 1.2e-142 510.4 350 77.7
HPP92_019412 Vanilla planifolia HOM05D004327 ORTHO05D005032 1.6e-142 510.0 366 73.8
C03p15000 Brassica napus HOM05D004327 ORTHO05D005032 2.8e-142 509.2 342 79.5
Lsat_1_v5_gn_7_54620 Lactuca sativa HOM05D004327 ORTHO05D005032 2.8e-142 509.2 352 78.4
A03p12840 Brassica napus HOM05D004327 ORTHO05D005032 4.7e-142 508.4 342 79.5
EL10Ac8g18287 Beta vulgaris HOM05D004327 ORTHO05D005032 8.0e-142 507.7 367 74.7
CAN.G210.1 Capsicum annuum HOM05D004327 ORTHO05D005032 8.0e-142 507.7 354 77.4
AL3G53050 Arabidopsis lyrata HOM05D004327 ORTHO05D005032 5.2e-141 505.0 362 74.9
BcaC01g06496 Brassica carinata HOM05D004327 ORTHO05D005032 5.2e-141 505.0 363 75.2
SalBow6G1961 Salvia bowleyana HOM05D004327 ORTHO05D005032 2.6e-140 502.7 367 74.7
CARHR109440 Cardamine hirsuta HOM05D004327 ORTHO05D005032 1.9e-138 496.5 366 73.0
unitig_0.g2679 Utricularia gibba HOM05D004327 ORTHO05D005032 2.7e-137 492.7 376 72.3
Lalb_Chr13g0300201 Lupinus albus HOM05D004327 ORTHO05D005032 3.5e-137 492.3 355 76.3
CiPaw.08G036000 Carya illinoinensis HOM05D004327 ORTHO05D005032 2.3e-136 489.6 358 74.3
CDE07G0842 Ceratophyllum demersum HOM05D004327 ORTHO05D005032 6.6e-136 488.0 352 73.0
AUR62033220 Chenopodium quinoa HOM05D004327 ORTHO05D005032 1.1e-135 487.3 384 71.1
BolC9t54328H Brassica oleracea HOM05D004327 ORTHO05D005032 1.6e-134 483.4 345 75.4
THA.LOC104803493 Tarenaya hassleriana HOM05D004327 ORTHO05D005032 2.1e-134 483.0 363 74.7
Carub.0003s3311 Capsella rubella HOM05D004327 ORTHO05D005032 2.8e-134 482.6 369 71.5
Sp3g32340 Schrenkiella parvula HOM05D004327 ORTHO05D005032 1.8e-133 479.9 367 72.2
Thhalv10022742m.g Eutrema salsugineum HOM05D004327 ORTHO05D005032 1.5e-132 476.9 367 71.1
Os08g0242900 Oryza sativa ssp. japonica HOM05D004327 ORTHO05D005032 1.5e-132 476.9 395 67.6
Zm00001eb178290 Zea mays HOM05D004327 ORTHO05D005032 9.8e-132 474.2 375 70.9
AagrBONN_evm.TU.Sc2ySwM_117.785 Anthoceros agrestis HOM05D004327 ORTHO05D005032 4.9e-131 471.9 388 64.7
SHI02909 Sapria himalayana HOM05D004327 ORTHO05D005032 4.1e-130 468.8 363 71.1
A09p12090 Brassica napus HOM05D004327 ORTHO05D005032 1.6e-129 466.8 345 73.9
BraA09t36853Z Brassica rapa HOM05D004327 ORTHO05D005032 3.5e-129 465.7 345 73.6
MELO3C004022.2 Cucumis melo HOM05D004327 ORTHO05D005032 4.6e-129 465.3 297 84.8
BcaB07g31641 Brassica carinata HOM05D004327 ORTHO05D005032 3.9e-128 462.2 347 72.9
BcaC04g22882 Brassica carinata HOM05D004327 ORTHO05D005032 1.1e-127 460.7 345 73.0
C09p14270 Brassica napus HOM05D004327 ORTHO05D005032 1.1e-127 460.7 345 73.0
Aa31LG8G15970 Aethionema arabicum HOM05D004327 ORTHO05D005032 9.5e-127 457.6 368 69.6
SMO352G0043 Selaginella moellendorffii HOM05D004327 ORTHO05D005032 7.6e-124 448.0 350 68.6
AUR62021302 Chenopodium quinoa HOM05D004327 ORTHO05D005032 2.9e-123 446.0 362 69.6
Pp3c12_10100 Physcomitrium patens HOM05D004327 ORTHO05D005032 2.1e-121 439.9 345 66.4
FAN17G0468 Fragaria x ananassa HOM05D004327 ORTHO05D005032 3.9e-120 435.6 330 71.8
Nitab4.5_0005945g0010 Nicotiana tabacum HOM05D004327 ORTHO05D005032 8.1e-118 427.9 388 62.9
Nitab4.5_0004572g0010 Nicotiana tabacum HOM05D004327 ORTHO05D005032 8.9e-117 424.5 379 65.4
Pp3c5_23860 Physcomitrium patens HOM05D004327 ORTHO05D005032 1.3e-115 420.6 361 61.5
TAR636G3612 Trochodendron aralioides HOM05D000809 ORTHO05D001196 1.1e-114 417.5 292 79.5
Lj9A24G29 Lonicera japonica HOM05D004327 ORTHO05D005032 3.2e-114 416.0 268 82.1
Pp3c3_22200 Physcomitrium patens HOM05D004327 ORTHO05D005032 1.3e-112 410.6 366 60.9
Actinidia38633 Actinidia chinensis HOM05D004327 ORTHO05D005032 1.9e-111 406.8 290 75.9
SMO137G0257 Selaginella moellendorffii HOM05D004327 ORTHO05D005032 5.3e-109 398.7 326 65.6
Haze_22092 Corylus avellana HOM05D004327 ORTHO05D005032 2.4e-106 389.8 267 78.7
Mapoly0023s0050 Marchantia polymorpha HOM05D004327 ORTHO05D005032 7.1e-106 388.3 339 61.1
Pp3c10_16450 Physcomitrium patens HOM05D004327 ORTHO05D005032 1.2e-105 387.5 314 64.0
Pp3c16_10790 Physcomitrium patens HOM05D004327 ORTHO05D005032 3.9e-104 382.5 367 56.4
CBR_g34541 Chara braunii HOM05D004327 ORTHO05D005032 4.3e-103 379.0 343 59.5
Actinidia27011 Actinidia chinensis HOM05D004327 ORTHO05D005032 1.6e-102 377.1 303 71.0
AT2G18876 Arabidopsis thaliana HOM05D004327 ORTHO05D005032 2.0e-100 370.2 271 74.5
Duzib170G0255 Durio zibethinus HOM05D004327 ORTHO05D005032 3.2e-98 362.8 221 88.2
CBR_g4121 Chara braunii HOM05D004327 ORTHO05D005032 2.0e-92 343.6 345 55.9
BcaB01g04461 Brassica carinata HOM05D004327 ORTHO05D005032 2.5e-90 336.7 287 64.8
Actinidia02748 Actinidia chinensis HOM05D004327 ORTHO05D005032 5.7e-87 325.5 224 81.2
BcaC01g06490 Brassica carinata HOM05D004327 ORTHO05D005032 3.7e-70 269.6 182 78.0
Aqoxy4G01695 Aquilegia oxysepala HOM05D004327 ORTHO05D005032 5.5e-50 202.6 125 88.0
FAN17G0800 Fragaria x ananassa HOM05D004327 ORTHO05D005032 2.7e-49 200.3 142 77.5
Oeu042171.1 Olea europaea HOM05D004327 ORTHO05D005032 2.6e-47 193.7 129 80.6
Haze_22093 Corylus avellana HOM05D004327 ORTHO05D005032 1.3e-46 191.4 150 72.7
BcaC01g06489 Brassica carinata HOM05D004327 ORTHO05D005032 4.1e-45 186.4 142 69.0
SEGI_01506 Sequoiadendron giganteum HOM05D004327 ORTHO05D005032 9.5e-34 148.7 105 73.3
Lj9A25T20 Lonicera japonica HOM05D004327 ORTHO05D005032 3.6e-33 146.7 97 79.4
HanXRQChr08g0229701 Helianthus annuus HOM05D000502 ORTHO05D005032 6.6e-27 125.9 70 81.4
HanXRQChr09g0245491 Helianthus annuus HOM05D000502 ORTHO05D005032 6.6e-27 125.9 70 81.4
Pp3c26_7180 Physcomitrium patens HOM05D004327 ORTHO05D005032 3.3e-26 123.6 98 58.2
HanXRQChr13g0404041 Helianthus annuus HOM05D000502 ORTHO05D005032 9.5e-26 122.1 70 80.0
SEGI_38031 Sequoiadendron giganteum HOM05D004327 ORTHO05D005032 1.0e-24 118.6 81 77.8
Aqoxy7G03035 Aquilegia oxysepala HOM05D004327 ORTHO05D005032 2.7e-20 104.0 130 50.8
BraA02t05921Z Brassica rapa HOM05D004327 ORTHO05D005032 4.3e-18 96.7 81 65.4
CiPaw.01G111100 Carya illinoinensis HOM05D002292 ORTHO05D005032 9.5e-18 95.5 58 91.4
COL.COLO4_28287 Corchorus olitorius HOM05D004327 ORTHO05D005032 4.7e-17 93.2 56 91.1
BcaB05g22345 Brassica carinata HOM05D004327 ORTHO05D005032 4.4e-15 86.7 93 53.8
Glyma.09G140000 Glycine max HOM05D004327 ORTHO05D005032 3.7e-14 83.6 74 55.4
Pp3c25_9090 Physcomitrium patens HOM05D004327 ORTHO05D005032 2.7e-12 77.4 97 51.5
C02p14250 Brassica napus HOM05D004327 ORTHO05D032179 4.6e-12 76.6 128 43.0
BolC9t54329H Brassica oleracea HOM05D004327 ORTHO05D005032 7.8e-12 75.9 58 74.1
Oeu003512.1 Olea europaea HOM05D004327 ORTHO05D005032 1.7e-11 74.7 40 92.5
PRCOL_00002192 Prasinoderma coloniale HOM05D004327 ORTHO05D005032 1.2e-09 68.6 293 25.3
MCO09G810 Micromonas commoda HOM05D004327 ORTHO05D005032 2.1e-09 67.8 167 30.5
CiPaw.16G058000 Carya illinoinensis HOM05D002292 ORTHO05D003256 1.4e-08 65.1 38 94.7
BcaC03g14154 Brassica carinata HOM05D004327 ORTHO05D032179 5.2e-08 63.2 76 46.1


User provided reference genes

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