Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G1103 Cannabis sativa HOM05D007298 ORTHO05D009226 2.1e-116 422.9 239 100.0
COL.COLO4_37432 Corchorus olitorius HOM05D007298 ORTHO05D009226 4.9e-41 172.6 231 51.5
Sabra01G0000900 Salix brachista HOM05D007298 ORTHO05D009226 8.3e-41 171.8 250 49.6
Duzib205G1649 Durio zibethinus HOM05D007298 ORTHO05D009226 2.4e-40 170.2 230 50.9
Thecc.03G118900 Theobroma cacao HOM05D007298 ORTHO05D009226 2.4e-40 170.2 225 51.1
MBI13_g02430_MAGBIO Magnolia biondii HOM05D007298 ORTHO05D009226 4.1e-40 169.5 248 48.4
Hma1.2p1_1436F.1_g283160 Hydrangea macrophylla HOM05D007298 ORTHO05D009226 1.6e-39 167.5 251 47.8
Cfa009528 Carpinus fangiana HOM05D007298 ORTHO05D009226 1.7e-38 164.1 224 52.2
TAR623G1587 Trochodendron aralioides HOM05D007298 ORTHO05D009226 3.9e-38 162.9 232 47.8
CiPaw.13G179900 Carya illinoinensis HOM05D007298 ORTHO05D009226 1.1e-37 161.4 241 49.4
Cc11_g17470 Coffea canephora HOM05D007298 ORTHO05D009226 5.6e-37 159.1 229 46.7
MELO3C026268.2 Cucumis melo HOM05D007298 ORTHO05D009226 9.6e-37 158.3 223 51.6
Actinidia30606 Actinidia chinensis HOM05D007298 ORTHO05D009226 1.2e-36 157.9 225 49.8
ClCG06G017280 Citrullus lanatus HOM05D007298 ORTHO05D009226 1.2e-36 157.9 223 52.0
CsaV3_1G001220 Cucumis sativus L. HOM05D007298 ORTHO05D009226 1.6e-36 157.5 230 50.9
Gohir.A12G186800 Gossypium hirsutum HOM05D007298 ORTHO05D009226 2.1e-36 157.1 251 46.2
Gohir.D12G189800 Gossypium hirsutum HOM05D007298 ORTHO05D009226 2.1e-36 157.1 251 46.2
Sed0017427 Sechium edule HOM05D007298 ORTHO05D009226 3.6e-36 156.4 226 53.1
Aqoxy2G04036 Aquilegia oxysepala HOM05D007298 ORTHO05D009226 4.7e-36 156.0 228 49.1
Glyma.07G199400 Glycine max HOM05D007298 ORTHO05D009226 1.4e-35 154.5 255 43.1
Gorai.008G203600 Gossypium raimondii HOM05D007298 ORTHO05D009226 1.4e-35 154.5 251 45.4
Nn2g15906 Nelumbo nucifera HOM05D007298 ORTHO05D009226 2.4e-35 153.7 239 48.1
Potri.001G001000 Populus trichocarpa HOM05D007298 ORTHO05D009226 4.0e-35 152.9 223 50.7
Lj4g0005920 Lotus japonicus HOM05D007298 ORTHO05D009226 1.5e-34 151.0 233 48.1
CSS0015764 Camellia sinensis var. sinensis HOM05D007298 ORTHO05D009226 3.4e-34 149.8 240 46.2
FvH4_3g45980 Fragaria vesca HOM05D007298 ORTHO05D009226 9.9e-34 148.3 253 44.3
arahy.Tifrunner.gnm1.ann1.IS7ZQD Arachis hypogaea HOM05D002349 ORTHO05D002464 3.8e-33 146.4 217 47.9
arahy.Tifrunner.gnm1.ann1.MB6W4F Arachis hypogaea HOM05D002349 ORTHO05D002464 3.8e-33 146.4 217 47.9
Sc05g0003880 Simmondsia chinensis HOM05D007298 ORTHO05D009226 3.8e-33 146.4 255 42.4
VMungo0251G1522 Vigna mungo HOM05D007298 ORTHO05D009226 1.1e-32 144.8 241 45.6
FAN16G2589 Fragaria x ananassa HOM05D007298 ORTHO05D009226 2.4e-32 143.7 254 43.3
Glyma.13G177000 Glycine max HOM05D007298 ORTHO05D009226 2.4e-32 143.7 250 44.0
TPR.G16338 Trifolium pratense HOM05D007298 ORTHO05D009226 3.2e-32 143.3 241 44.0
vmacro16084 Vaccinium macrocarpon HOM05D007298 ORTHO05D009226 3.2e-32 143.3 251 44.6
MD11G1000700 Malus domestica HOM05D007298 ORTHO05D009226 4.2e-32 142.9 243 46.1
PGR119G1464 Punica granatum HOM05D007298 ORTHO05D009226 5.4e-32 142.5 224 47.3
Manes.15G111000 Manihot esculenta HOM05D007298 ORTHO05D009226 7.1e-32 142.1 236 48.3
Lalb_Chr16g0383911 Lupinus albus HOM05D007298 ORTHO05D009226 1.2e-31 141.4 228 47.8
AUR62008624 Chenopodium quinoa HOM05D007298 ORTHO05D009226 1.6e-31 141.0 219 43.4
Nn7g35796 Nelumbo nucifera HOM05D007298 ORTHO05D009226 2.7e-31 140.2 230 47.8
DCAR_006996 Daucus carota HOM05D007298 ORTHO05D009226 6.0e-31 139.0 264 42.0
Eucgr.J01725 Eucalyptus grandis HOM05D007298 ORTHO05D009226 6.0e-31 139.0 222 46.8
Duzib084G1143 Durio zibethinus HOM05D007298 ORTHO05D009226 7.8e-31 138.7 232 46.6
Peaxi162Scf00128g01770 Petunia axillaris HOM05D007298 ORTHO05D009226 7.8e-31 138.7 228 42.1
Psat7g113280 Pisum sativum HOM05D007298 ORTHO05D009226 1.0e-30 138.3 241 44.0
RcHm_v2.0_Chr5g0084091 Rosa chinensis HOM05D007298 ORTHO05D009226 1.0e-30 138.3 279 40.1
Medtr4g088515 Medicago truncatula HOM05D000062 ORTHO05D000043 2.3e-30 137.1 234 45.3
Nitab4.5_0007554g0010 Nicotiana tabacum HOM05D007298 ORTHO05D009226 2.3e-30 137.1 226 44.2
Nitab4.5_0008442g0010 Nicotiana tabacum HOM05D007298 ORTHO05D009226 2.3e-30 137.1 222 42.8
Migut.K01030 Erythranthe guttata HOM05D007298 ORTHO05D009226 3.9e-30 136.3 245 41.6
Ciclev10017525m.g Citrus clementina HOM05D007298 ORTHO05D009226 1.1e-29 134.8 223 45.7
Haze_22918 Corylus avellana HOM05D007298 ORTHO05D009226 1.1e-29 134.8 214 49.5
Phvul.002G230700 Phaseolus vulgaris HOM05D007298 ORTHO05D009226 1.1e-29 134.8 240 42.1
PGSC0003DMG400025413 Solanum tuberosum HOM05D007298 ORTHO05D009226 1.1e-29 134.8 240 41.7
TWI32G0891 Tripterygium wilfordii HOM05D007298 ORTHO05D009226 1.9e-29 134.0 205 47.8
Dinv31519 Davidia involucrata HOM05D007298 ORTHO05D009226 4.3e-29 132.9 239 45.2
QL01p007822 Quercus lobata HOM05D007298 ORTHO05D009226 4.3e-29 132.9 236 44.1
Lalb_Chr09g0327771 Lupinus albus HOM05D007298 ORTHO05D009226 3.6e-28 129.8 248 44.0
Carub.0007s1454 Capsella rubella HOM05D007298 ORTHO05D009226 6.2e-28 129.0 234 43.6
AT4G26415 Arabidopsis thaliana HOM05D007298 ORTHO05D009226 1.1e-27 128.3 238 43.3
Prupe.6G001000 Prunus persica HOM05D007298 ORTHO05D009226 1.4e-27 127.9 293 38.6
Rhsim12G0097800 Rhododendron simsii HOM05D007298 ORTHO05D009226 4.0e-27 126.3 234 43.2
Ca_18576_v3 Cicer arietinum L. HOM05D007298 ORTHO05D009226 6.9e-27 125.6 216 44.9
Lalb_Chr05g0218531 Lupinus albus HOM05D007298 ORTHO05D009226 9.0e-27 125.2 234 42.7
EL10Ac4g07728 Beta vulgaris HOM05D007298 ORTHO05D009226 1.5e-26 124.4 209 42.6
FAN11G2203 Fragaria x ananassa HOM05D007298 ORTHO05D009226 1.5e-26 124.4 237 42.2
Sed0020092 Sechium edule HOM05D007298 ORTHO05D009226 3.4e-26 123.2 220 43.6
Lsat_1_v5_gn_4_2201 Lactuca sativa HOM05D007298 ORTHO05D009226 4.4e-26 122.9 218 41.7
Sp7g24320 Schrenkiella parvula HOM05D007298 ORTHO05D009226 5.8e-26 122.5 231 42.0
AUR62033147 Chenopodium quinoa HOM05D007298 ORTHO05D009226 9.9e-26 121.7 206 42.2
FAN21G1139 Fragaria x ananassa HOM05D007298 ORTHO05D009226 1.3e-25 121.3 240 42.1
Sopen05g018720 Solanum pennellii HOM05D007298 ORTHO05D009226 2.9e-25 120.2 230 40.0
Ah.08g213460 Amaranthus hybridus HOM05D007298 ORTHO05D009226 3.8e-25 119.8 207 42.0
DCAR_006994 Daucus carota HOM05D007298 ORTHO05D009226 3.8e-25 119.8 249 40.6
AL7G26540 Arabidopsis lyrata HOM05D007298 ORTHO05D009226 4.9e-25 119.4 217 42.9
A03p56680 Brassica napus HOM05D007298 ORTHO05D009226 4.9e-25 119.4 231 41.1
BraA03t14738Z Brassica rapa HOM05D007298 ORTHO05D009226 4.9e-25 119.4 231 41.1
CARHR233970 Cardamine hirsuta HOM05D007298 ORTHO05D009226 6.4e-25 119.0 239 41.8
THA.LOC104813474 Tarenaya hassleriana HOM05D007298 ORTHO05D009226 8.4e-25 118.6 230 38.7
Nitab4.5_0001600g0070 Nicotiana tabacum HOM05D005538 ORTHO05D007055 1.1e-24 118.2 212 42.5
C07p54880 Brassica napus HOM05D007298 ORTHO05D009226 1.4e-24 117.9 232 40.9
BolC7t45976H Brassica oleracea HOM05D007298 ORTHO05D009226 1.4e-24 117.9 232 40.9
Hma1.2p1_0459F.1_g157260 Hydrangea macrophylla HOM05D007298 ORTHO05D009226 1.4e-24 117.9 219 42.9
FAN25G2175 Fragaria x ananassa HOM05D007298 ORTHO05D009226 1.9e-24 117.5 238 41.2
SGA_v2.0_scaffold9G04794 Striga asiatica HOM05D002076 ORTHO05D002087 2.4e-24 117.1 234 37.6
Cpa.g.sc119.13 Carica papaya HOM05D007298 ORTHO05D009226 9.3e-24 115.2 205 43.9
unitig_22.g6385 Utricularia gibba HOM05D007298 ORTHO05D009226 9.3e-24 115.2 217 39.2
ATR0068G085 Amborella trichopoda HOM05D007298 ORTHO05D009226 1.2e-23 114.8 276 38.0
Actinidia09612 Actinidia chinensis HOM05D007298 ORTHO05D009226 1.6e-23 114.4 252 40.9
BcaC06g32750 Brassica carinata HOM05D007298 ORTHO05D009226 4.6e-23 112.8 209 41.1
HanXRQChr12g0385721 Helianthus annuus HOM05D007298 ORTHO05D009226 6.0e-23 112.5 218 39.4
Solyc05g024020.1 Solanum lycopersicum HOM05D007298 ORTHO05D009226 6.0e-23 112.5 223 38.6
Thhalv10026008m.g Eutrema salsugineum HOM05D007298 ORTHO05D009226 1.5e-21 107.8 209 42.1
Zm00001eb127960 Zea mays HOM05D007298 ORTHO05D009226 3.3e-21 106.7 166 45.8
BcaNung02423 Brassica carinata HOM05D007298 ORTHO05D009226 7.3e-21 105.5 233 41.2
SalBow2G0405 Salvia bowleyana HOM05D007298 ORTHO05D009226 9.0e-19 98.6 209 37.3
SalBow2G1404 Salvia bowleyana HOM05D007298 ORTHO05D009226 9.0e-19 98.6 209 37.3
Glyma.13G237100 Glycine max HOM05D007298 ORTHO05D009226 2.0e-18 97.4 124 53.2
Glyma.15G076400 Glycine max HOM05D007298 ORTHO05D009226 1.3e-12 78.2 170 42.4
Phvul.006G183700 Phaseolus vulgaris HOM05D007298 ORTHO05D009226 1.2e-10 71.6 117 41.9
CDE07G0295 Ceratophyllum demersum HOM05D000114 ORTHO05D000038 3.0e-06 57.0 169 36.1
Nitab4.5_0000340g0060 Nicotiana tabacum HOM05D007298 ORTHO05D009226 5.1e-06 56.2 86 39.5


User provided reference genes

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