Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G1049 Cannabis sativa HOM05D006019 ORTHO05D007900 0.0e+00 1083.2 557 100.0
Manes.03G136600 Manihot esculenta HOM05D006019 ORTHO05D007900 1.1e-216 756.9 560 70.0
QL08p020269 Quercus lobata HOM05D006019 ORTHO05D007900 3.5e-215 751.9 563 70.2
CiPaw.11G172700 Carya illinoinensis HOM05D006019 ORTHO05D007900 1.1e-213 746.9 543 71.8
CSS0042888 Camellia sinensis var. sinensis HOM05D006019 ORTHO05D007900 6.2e-212 741.1 557 69.1
Atru.chr2.3529 Acer truncatum HOM05D006019 ORTHO05D007900 2.3e-211 739.2 562 68.9
Haze_09462 Corylus avellana HOM05D006019 ORTHO05D007900 4.0e-211 738.4 560 69.8
Phvul.008G272400 Phaseolus vulgaris HOM05D006019 ORTHO05D007900 1.2e-210 736.9 561 67.7
GSVIVG01037722001 Vitis vinifera HOM05D006019 ORTHO05D007900 1.5e-210 736.5 538 70.1
Sabra15G0091100 Salix brachista HOM05D006019 ORTHO05D007900 2.6e-210 735.7 514 71.4
VMungo0647G0128 Vigna mungo HOM05D006019 ORTHO05D007900 2.6e-210 735.7 565 68.3
Atru.chr2.3549 Acer truncatum HOM05D006019 ORTHO05D007900 4.4e-210 734.9 562 68.3
CSS0000535 Camellia sinensis var. sinensis HOM05D006019 ORTHO05D007900 5.8e-210 734.6 524 71.2
Potri.015G065900 Populus trichocarpa HOM05D006019 ORTHO05D007900 3.7e-209 731.9 532 69.7
Glyma.14G018700 Glycine max HOM05D006019 ORTHO05D007900 2.5e-205 719.2 526 69.0
Eucgr.F03504 Eucalyptus grandis HOM05D006019 ORTHO05D007900 3.3e-205 718.8 564 66.1
Glyma.02G294900 Glycine max HOM05D006019 ORTHO05D007900 1.6e-204 716.5 562 66.9
Prupe.4G223000 Prunus persica HOM05D006019 ORTHO05D007900 4.7e-204 714.9 530 69.4
TAR629G1914 Trochodendron aralioides HOM05D006019 ORTHO05D007900 6.2e-204 714.5 476 73.9
LjContig00272g0018197 Lotus japonicus HOM05D006019 ORTHO05D007900 1.1e-203 713.8 471 76.0
ClCG10G005120 Citrullus lanatus HOM05D006019 ORTHO05D007900 1.4e-203 713.4 541 68.2
FAN21G2609 Fragaria x ananassa HOM05D006019 ORTHO05D007900 1.4e-203 713.4 557 67.7
vmacro09689 Vaccinium macrocarpon HOM05D006019 ORTHO05D007900 1.4e-203 713.4 471 75.8
MD11G1209500 Malus domestica HOM05D006019 ORTHO05D007900 3.1e-203 712.2 558 67.4
Actinidia35369 Actinidia chinensis HOM05D006019 ORTHO05D007900 6.8e-203 711.1 471 74.7
COL.COLO4_09733 Corchorus olitorius HOM05D006019 ORTHO05D007900 1.2e-202 710.3 568 64.4
RcHm_v2.0_Chr5g0041541 Rosa chinensis HOM05D006019 ORTHO05D007900 3.4e-202 708.8 557 66.4
Ciclev10007944m.g Citrus clementina HOM05D006019 ORTHO05D007900 4.4e-202 708.4 561 67.2
Lalb_Chr04g0248161 Lupinus albus HOM05D006019 ORTHO05D007900 1.7e-201 706.4 557 65.7
MELO3C014178.2 Cucumis melo HOM05D006019 ORTHO05D007900 2.9e-201 705.7 473 74.4
CsaV3_3G004800 Cucumis sativus L. HOM05D006019 ORTHO05D007900 2.9e-201 705.7 521 69.7
Cc05_g14300 Coffea canephora HOM05D006019 ORTHO05D007900 1.6e-199 699.9 481 71.5
Duzib213G0195 Durio zibethinus HOM05D006019 ORTHO05D007900 1.6e-199 699.9 562 65.7
FAN25G1378 Fragaria x ananassa HOM05D006019 ORTHO05D007900 1.3e-198 696.8 557 66.4
Thecc.07G028300 Theobroma cacao HOM05D006019 ORTHO05D007900 1.3e-198 696.8 566 64.8
Dinv22232 Davidia involucrata HOM05D006019 ORTHO05D007900 1.7e-198 696.4 541 66.9
Nn1g07344 Nelumbo nucifera HOM05D006019 ORTHO05D007900 3.0e-198 695.7 468 73.3
Gohir.D01G070900 Gossypium hirsutum HOM05D006019 ORTHO05D007900 3.3e-197 692.2 567 64.7
THA.LOC104817684 Tarenaya hassleriana HOM05D006019 ORTHO05D007900 5.6e-197 691.4 471 71.3
Gorai.002G093600 Gossypium raimondii HOM05D006019 ORTHO05D007900 7.3e-197 691.0 567 64.4
PGR031G3909 Punica granatum HOM05D006019 ORTHO05D007900 7.3e-197 691.0 559 64.8
arahy.Tifrunner.gnm1.ann1.G2L6CM Arachis hypogaea HOM05D006019 ORTHO05D007900 1.3e-196 690.3 459 73.6
CAN.G337.58 Capsicum annuum HOM05D006019 ORTHO05D007900 1.3e-196 690.3 460 72.8
Gohir.A01G084500 Gossypium hirsutum HOM05D006019 ORTHO05D007900 1.6e-196 689.9 565 64.2
Peaxi162Scf00235g00727 Petunia axillaris HOM05D006019 ORTHO05D007900 1.1e-195 687.2 512 67.8
Lj1C880T10 Lonicera japonica HOM05D006019 ORTHO05D007900 3.1e-195 685.6 527 67.2
Medtr5g093830 Medicago truncatula HOM05D006019 ORTHO05D007900 3.1e-195 685.6 556 64.6
Sed0026759 Sechium edule HOM05D006019 ORTHO05D007900 4.0e-195 685.3 512 68.6
Cpa.g.sc284.5 Carica papaya HOM05D006019 ORTHO05D007900 6.9e-195 684.5 581 63.5
ECA240G2757 Erigeron canadensis HOM05D006019 ORTHO05D007900 5.8e-194 681.4 525 65.7
AUR62020342 Chenopodium quinoa HOM05D006019 ORTHO05D007900 1.3e-193 680.2 513 65.5
PGSC0003DMG400022300 Solanum tuberosum HOM05D006019 ORTHO05D007900 2.9e-193 679.1 460 71.7
Nitab4.5_0000984g0040 Nicotiana tabacum HOM05D006019 ORTHO05D007900 8.4e-193 677.6 494 69.0
AT5G55220 Arabidopsis thaliana HOM05D006019 ORTHO05D007900 1.1e-192 677.2 561 63.3
AL8G30770 Arabidopsis lyrata HOM05D006019 ORTHO05D007900 1.4e-192 676.8 561 62.9
Nitab4.5_0002826g0040 Nicotiana tabacum HOM05D006019 ORTHO05D007900 1.9e-192 676.4 481 70.5
Sopen07g033150 Solanum pennellii HOM05D006019 ORTHO05D007900 1.9e-192 676.4 460 71.3
Lsat_1_v5_gn_9_90660 Lactuca sativa HOM05D006019 ORTHO05D007900 4.2e-192 675.2 557 62.3
HanXRQChr13g0408251 Helianthus annuus HOM05D006019 ORTHO05D007900 2.1e-191 672.9 538 62.8
Solyc07g064950.3 Solanum lycopersicum HOM05D006019 ORTHO05D007900 3.5e-191 672.2 512 66.0
DCAR_017106 Daucus carota HOM05D006019 ORTHO05D007900 6.0e-191 671.4 443 73.4
Oeu026379.1 Olea europaea HOM05D006019 ORTHO05D007900 1.7e-190 669.8 468 70.1
Migut.M01708 Erythranthe guttata HOM05D006019 ORTHO05D007900 3.0e-190 669.1 481 69.2
FvH4_3g23540 Fragaria vesca HOM05D006019 ORTHO05D007900 3.0e-190 669.1 491 70.1
Thhalv10013195m.g Eutrema salsugineum HOM05D006019 ORTHO05D007900 5.1e-190 668.3 482 68.5
Carub.0008s1557 Capsella rubella HOM05D006019 ORTHO05D007900 8.7e-190 667.5 486 68.9
Psat2g009800 Pisum sativum HOM05D006019 ORTHO05D007900 1.9e-189 666.4 559 62.6
BcaB05g22192 Brassica carinata HOM05D006019 ORTHO05D007900 2.5e-189 666.0 479 68.1
TPR.G35353 Trifolium pratense HOM05D006019 ORTHO05D007900 2.5e-189 666.0 560 63.8
CARHR268580 Cardamine hirsuta HOM05D006019 ORTHO05D007900 1.6e-188 663.3 560 63.2
TWI39G1205 Tripterygium wilfordii HOM05D006019 ORTHO05D007900 4.8e-188 661.8 563 61.8
Sp6g17150 Schrenkiella parvula HOM05D006019 ORTHO05D007900 6.2e-188 661.4 478 68.6
Ca_06346_v3 Cicer arietinum L. HOM05D006019 ORTHO05D007900 3.1e-187 659.1 440 73.2
BolC2t07733H Brassica oleracea HOM05D006019 ORTHO05D007900 6.9e-187 657.9 492 66.7
BraA02t06043Z Brassica rapa HOM05D006019 ORTHO05D007900 4.5e-186 655.2 475 68.2
Aa31LG3G11210 Aethionema arabicum HOM05D006019 ORTHO05D007900 1.7e-185 653.3 460 69.6
FAN16G2690 Fragaria x ananassa HOM05D006019 ORTHO05D007900 3.5e-183 645.6 557 63.9
arahy.Tifrunner.gnm1.ann1.PR9FWM Arachis hypogaea HOM05D006019 ORTHO05D007900 7.9e-183 644.4 459 69.3
PSO541G6030 Papaver somniferum HOM05D006019 ORTHO05D007900 1.0e-182 644.0 533 62.3
EL10Ac4g07692 Beta vulgaris HOM05D006019 ORTHO05D007900 1.3e-182 643.7 540 60.6
PSO675G6628 Papaver somniferum HOM05D006019 ORTHO05D007900 6.7e-182 641.3 533 62.1
MBI19_g29437_MAGBIO Magnolia biondii HOM05D006019 ORTHO05D007900 1.5e-181 640.2 474 66.5
Aqoxy1G02863 Aquilegia oxysepala HOM05D006019 ORTHO05D007900 2.5e-181 639.4 461 68.8
Rhsim04G0016400 Rhododendron simsii HOM05D006019 ORTHO05D000403 1.8e-179 633.3 550 62.0
HanXRQChr03g0076861 Helianthus annuus HOM05D006019 ORTHO05D007900 2.4e-179 632.9 460 66.3
AUR62015881 Chenopodium quinoa HOM05D006019 ORTHO05D007900 4.2e-176 622.1 525 60.4
C02p16310 Brassica napus HOM05D006019 ORTHO05D000403 1.8e-174 616.7 455 66.8
A02p09780 Brassica napus HOM05D006019 ORTHO05D000403 3.9e-174 615.5 455 66.6
Ah.06g182250 Amaranthus hybridus HOM05D006019 ORTHO05D007900 1.0e-169 600.9 545 56.3
Hund01957 Selenicereus undatus HOM05D006019 ORTHO05D007900 1.7e-169 600.1 558 59.0
ATR1128G029 Amborella trichopoda HOM05D006019 ORTHO05D007900 3.5e-167 592.4 443 64.1
BcaC03g14251 Brassica carinata HOM05D006019 ORTHO05D007900 6.1e-167 591.7 480 63.1
Os06g0308000 Oryza sativa ssp. japonica HOM05D006019 ORTHO05D007900 7.4e-165 584.7 451 63.4
Zm00001eb405570 Zea mays HOM05D006019 ORTHO05D007900 1.4e-158 563.9 454 59.5
SGA_v2.0_scaffold171G38908 Striga asiatica HOM05D006019 ORTHO05D007900 1.4e-150 537.3 488 58.0
Sc16g0005740 Simmondsia chinensis HOM05D006019 ORTHO05D007900 6.7e-150 535.0 489 58.9
unitig_22.g6170 Utricularia gibba HOM05D006019 ORTHO05D007900 1.2e-146 524.2 373 71.0
SalBow8G4839 Salvia bowleyana HOM05D006019 ORTHO05D007900 7.7e-146 521.5 484 58.7
BcaC03g14252 Brassica carinata HOM05D006019 ORTHO05D007900 1.4e-139 500.7 374 64.2
SEGI_28230 Sequoiadendron giganteum HOM05D006019 ORTHO05D007900 2.0e-133 480.3 470 49.8
CDE04G0522 Ceratophyllum demersum HOM05D006019 ORTHO05D007900 8.5e-129 464.9 423 55.8
Pp3c11_10950 Physcomitrium patens HOM05D006019 ORTHO05D007900 6.1e-127 458.8 454 49.3
FAN11G0939 Fragaria x ananassa HOM05D006019 ORTHO05D007900 8.0e-127 458.4 351 65.2
Pp3c2_30270 Physcomitrium patens HOM05D006019 ORTHO05D007900 1.5e-125 454.1 458 50.0
AagrBONN_evm.TU.Sc2ySwM_228.3732 Anthoceros agrestis HOM05D006019 ORTHO05D007900 6.3e-124 448.7 455 49.2
Mapoly0157s0020 Marchantia polymorpha HOM05D006019 ORTHO05D007900 9.2e-123 444.9 452 48.5
CBR_g21850 Chara braunii HOM05D006019 ORTHO05D007900 4.5e-122 442.6 501 46.3
FAN25G3210 Fragaria x ananassa HOM05D006019 ORTHO05D007900 2.7e-114 416.8 307 68.1
SMO361G0007 Selaginella moellendorffii HOM05D006019 ORTHO05D007900 1.8e-110 404.1 439 44.4
MCO13G367 Micromonas commoda HOM05D006019 ORTHO05D007900 3.5e-74 283.5 452 34.7
PRCOL_00002693 Prasinoderma coloniale HOM05D006019 ORTHO05D007900 1.5e-64 251.5 424 34.2
A10p12490 Brassica napus HOM05D006019 ORTHO05D007900 5.7e-56 223.0 385 42.6
VMungo0464G1494 Vigna mungo HOM05D006019 ORTHO05D007900 4.6e-50 203.4 134 70.9
Glyma.14G020800 Glycine max HOM05D006019 ORTHO05D007900 1.3e-47 195.3 137 67.9
Oeu026380.1 Olea europaea HOM05D006019 ORTHO05D007900 4.2e-43 180.3 139 64.7
HPP92_015779 Vanilla planifolia HOM05D006019 ORTHO05D007900 7.4e-40 169.5 212 43.9
TAR720G0004 Trochodendron aralioides HOM05D006019 ORTHO05D007900 9.1e-38 162.5 107 76.6
Cre01.g001750 Chlamydomonas reinhardtii HOM05D006019 ORTHO05D007900 1.1e-32 145.6 470 24.3
VMungo0647G0792 Vigna mungo HOM05D006019 ORTHO05D007900 1.2e-26 125.6 91 70.3
Glyma.14G020666 Glycine max HOM05D006019 ORTHO05D007900 4.7e-26 123.6 92 64.1
CDE04G2936 Ceratophyllum demersum HOM05D006019 ORTHO05D007900 3.0e-25 120.9 68 86.8
BolC9t57451H Brassica oleracea HOM05D006019 ORTHO05D007900 4.4e-24 117.1 195 38.5
Hma1.2p1_4091F.1_g338270 Hydrangea macrophylla HOM05D006019 ORTHO05D007900 1.4e-22 112.1 113 59.3
C09p45770 Brassica napus HOM05D006019 ORTHO05D007900 4.1e-22 110.5 220 34.5
BraA10t43342Z Brassica rapa HOM05D006019 ORTHO05D007900 3.5e-21 107.5 220 35.9
C09p45760 Brassica napus HOM05D006019 ORTHO05D007900 3.2e-19 100.9 120 52.5
BcaC04g20257 Brassica carinata HOM05D006019 ORTHO05D007900 3.1e-14 84.3 79 60.8
Ca_29171_v3 Cicer arietinum L. HOM05D006019 ORTHO05D003051 8.6e-12 76.3 447 22.6
unitig_22.g6169 Utricularia gibba HOM05D006019 ORTHO05D007900 1.7e-07 62.0 69 44.9


User provided reference genes

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