Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G0957 Cannabis sativa HOM05D008423 ORTHO05D010599 2.0e-68 262.3 133 100.0
Nn7g36010 Nelumbo nucifera HOM05D008423 ORTHO05D010599 5.2e-16 88.2 86 50.0
Manes.10G151900 Manihot esculenta HOM05D008423 ORTHO05D010599 2.6e-15 85.9 120 42.5
Hma1.2p1_0505F.1_g168150 Hydrangea macrophylla HOM05D008423 ORTHO05D010599 7.5e-15 84.3 126 40.5
Rhsim07G0049900 Rhododendron simsii HOM05D008423 ORTHO05D010599 9.8e-15 84.0 114 44.7
Actinidia31712 Actinidia chinensis HOM05D008423 ORTHO05D010599 2.2e-14 82.8 132 42.4
Nitab4.5_0000050g0280 Nicotiana tabacum HOM05D008423 ORTHO05D010599 1.8e-13 79.7 110 44.5
Prupe.2G003000 Prunus persica HOM05D008423 ORTHO05D010599 9.2e-13 77.4 76 53.9
Medtr2g061490 Medicago truncatula HOM05D008423 ORTHO05D010599 1.2e-12 77.0 93 50.5
Medtr2g061510 Medicago truncatula HOM05D008423 ORTHO05D010599 1.2e-12 77.0 93 50.5
Solyc10g045320.2 Solanum lycopersicum HOM05D008423 ORTHO05D010599 1.2e-12 77.0 106 43.4
Peaxi162Scf00245g01314 Petunia axillaris HOM05D008423 ORTHO05D010599 2.0e-12 76.3 102 43.1
Lj3g0025495 Lotus japonicus HOM05D008423 ORTHO05D010599 2.7e-12 75.9 132 42.4
QL04p001438 Quercus lobata HOM05D008423 ORTHO05D010599 3.5e-12 75.5 81 49.4
Sopen10g014490 Solanum pennellii HOM05D008423 ORTHO05D010599 3.5e-12 75.5 106 46.2
Potri.001G230200 Populus trichocarpa HOM05D008423 ORTHO05D010599 1.0e-11 73.9 107 44.9
QL04p001302 Quercus lobata HOM05D008423 ORTHO05D010599 1.0e-11 73.9 81 48.1
Lalb_Chr25g0283631 Lupinus albus HOM05D008423 ORTHO05D010599 1.3e-11 73.6 85 51.8
Phvul.005G041500 Phaseolus vulgaris HOM05D008423 ORTHO05D010599 1.7e-11 73.2 109 44.0
Psat1g127160 Pisum sativum HOM05D008423 ORTHO05D010599 2.3e-11 72.8 88 52.3
Duzib114G0357 Durio zibethinus HOM05D008423 ORTHO05D010599 8.6e-11 70.9 114 41.2
Glyma.08G157600 Glycine max HOM05D008423 ORTHO05D010599 1.1e-10 70.5 103 46.6
VMungo1080G1057 Vigna mungo HOM05D008423 ORTHO05D010599 1.1e-10 70.5 107 43.9
Ciclev10033102m.g Citrus clementina HOM05D008423 ORTHO05D010599 3.3e-10 68.9 80 43.8
TPR.G16173 Trifolium pratense HOM05D008423 ORTHO05D010599 3.3e-10 68.9 82 50.0
Thecc.01G416500 Theobroma cacao HOM05D008423 ORTHO05D010599 5.6e-10 68.2 122 36.9
PSO339G5978 Papaver somniferum HOM05D008423 ORTHO05D010599 7.3e-10 67.8 117 37.6
Migut.N01658 Erythranthe guttata HOM05D008423 ORTHO05D010599 9.5e-10 67.4 131 39.7
SGA_v2.0_scaffold4G02233 Striga asiatica HOM05D008423 ORTHO05D010599 1.6e-09 66.6 129 35.7
COL.COLO4_25062 Corchorus olitorius HOM05D008423 ORTHO05D010599 2.1e-09 66.2 94 44.7
PSO384G0182 Papaver somniferum HOM05D008423 ORTHO05D010599 4.7e-09 65.1 117 35.0
FAN01G1593 Fragaria x ananassa HOM05D008423 ORTHO05D010599 6.1e-09 64.7 79 46.8
RcHm_v2.0_Chr1g0313281 Rosa chinensis HOM05D008423 ORTHO05D010599 6.1e-09 64.7 72 50.0
FvH4_7g00090 Fragaria vesca HOM05D008423 ORTHO05D010599 8.0e-09 64.3 79 45.6
FAN06G2169 Fragaria x ananassa HOM05D008423 ORTHO05D010599 8.0e-09 64.3 79 45.6
FAN03G2952 Fragaria x ananassa HOM05D008423 ORTHO05D010599 1.8e-08 63.2 73 49.3
MSTRG.28099 Avicennia marina HOM05D008423 ORTHO05D010599 4.0e-08 62.0 84 48.8
Lsat_1_v5_gn_7_35900 Lactuca sativa HOM05D008423 ORTHO05D010599 6.8e-08 61.2 115 36.5
GSVIVG01001359001 Vitis vinifera HOM05D008423 ORTHO05D010599 6.8e-08 61.2 105 39.0
MD02G1319200 Malus domestica HOM05D008423 ORTHO05D010599 2.0e-07 59.7 80 43.8
ECA236G1240 Erigeron canadensis HOM05D008423 ORTHO05D010599 3.4e-07 58.9 109 38.5
HanXRQChr15g0480651 Helianthus annuus HOM05D008423 ORTHO05D010599 2.2e-06 56.2 111 39.6
Cc02_g26950 Coffea canephora HOM05D008423 ORTHO05D010599 3.7e-06 55.5 108 37.0
TWI73G0904 Tripterygium wilfordii HOM05D008423 ORTHO05D010599 4.9e-06 55.1 91 40.7
ClCG09G003740 Citrullus lanatus HOM05D008423 ORTHO05D010599 6.4e-06 54.7 82 39.0


User provided reference genes

Program Settings