Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G0807 Cannabis sativa HOM05D006119 ORTHO05D007641 1.5e-52 209.1 102 100.0
Haze_19227 Corylus avellana HOM05D006119 ORTHO05D007641 1.2e-39 166.4 100 76.0
Cfa020842 Carpinus fangiana HOM05D006119 ORTHO05D007641 2.6e-39 165.2 100 75.0
Manes.06G037000 Manihot esculenta HOM05D006119 ORTHO05D007641 5.7e-39 164.1 100 75.0
MD15G1154500 Malus domestica HOM05D006119 ORTHO05D007641 2.8e-38 161.8 102 72.5
Prupe.7G260900 Prunus persica HOM05D006119 ORTHO05D007641 6.3e-38 160.6 102 72.5
CiPaw.15G174900 Carya illinoinensis HOM05D006119 ORTHO05D007641 8.2e-38 160.2 100 73.0
QL02p092825 Quercus lobata HOM05D006119 ORTHO05D007641 1.4e-37 159.5 100 72.0
GSVIVG01023584001 Vitis vinifera HOM05D006119 ORTHO05D007641 1.8e-37 159.1 102 73.5
Glyma.02G202700 Glycine max HOM05D006119 ORTHO05D007641 2.4e-37 158.7 102 72.5
Cpa.g.sc46.139 Carica papaya HOM05D006119 ORTHO05D007641 3.1e-37 158.3 102 72.5
Ciclev10009941m.g Citrus clementina HOM05D006119 ORTHO05D007641 4.1e-37 157.9 98 77.6
Lalb_Chr07g0179791 Lupinus albus HOM05D006119 ORTHO05D007641 1.6e-36 156.0 102 70.6
MD02G1009100 Malus domestica HOM05D006119 ORTHO05D007641 1.6e-36 156.0 102 70.6
Gohir.A05G052000 Gossypium hirsutum HOM05D006119 ORTHO05D007641 3.5e-36 154.8 102 71.6
Gohir.D05G053500 Gossypium hirsutum HOM05D006119 ORTHO05D007641 4.5e-36 154.5 102 71.6
PGR102G3064 Punica granatum HOM05D006119 ORTHO05D007641 5.9e-36 154.1 100 68.0
Lsat_1_v5_gn_5_91501 Lactuca sativa HOM05D006119 ORTHO05D007641 1.0e-35 153.3 100 71.0
TWI63G1376 Tripterygium wilfordii HOM05D006119 ORTHO05D007641 1.0e-35 153.3 102 67.6
Hma1.2p1_0028F.1_g017420 Hydrangea macrophylla HOM05D006119 ORTHO05D007641 1.3e-35 152.9 100 72.0
MSTRG.26287 Avicennia marina HOM05D006119 ORTHO05D007641 1.7e-35 152.5 102 71.6
CARHR271810 Cardamine hirsuta HOM05D006119 ORTHO05D007641 1.7e-35 152.5 100 69.0
Dinv43227 Davidia involucrata HOM05D006119 ORTHO05D007641 2.2e-35 152.1 102 71.6
Gorai.009G055300 Gossypium raimondii HOM05D006119 ORTHO05D007641 2.2e-35 152.1 100 71.0
Lj4g0015042 Lotus japonicus HOM05D006119 ORTHO05D007641 2.2e-35 152.1 100 70.0
Thecc.09G032800 Theobroma cacao HOM05D006119 ORTHO05D007641 2.9e-35 151.8 100 70.0
BcaB01g04471 Brassica carinata HOM05D006119 ORTHO05D007641 5.0e-35 151.0 100 69.0
Dinv42873 Davidia involucrata HOM05D006119 ORTHO05D007641 6.5e-35 150.6 101 70.3
PGSC0003DMG400007897 Solanum tuberosum HOM05D006119 ORTHO05D007641 6.5e-35 150.6 102 68.6
Sopen12g005020 Solanum pennellii HOM05D006119 ORTHO05D007641 8.5e-35 150.2 102 68.6
AL8G34100 Arabidopsis lyrata HOM05D006119 ORTHO05D007641 1.1e-34 149.8 100 69.0
arahy.Tifrunner.gnm1.ann1.I28AR0 Arachis hypogaea HOM05D006119 ORTHO05D007641 1.1e-34 149.8 100 69.0
arahy.Tifrunner.gnm1.ann1.TAM15G Arachis hypogaea HOM05D006119 ORTHO05D007641 1.1e-34 149.8 100 69.0
RcHm_v2.0_Chr2g0085901 Rosa chinensis HOM05D006119 ORTHO05D007641 1.1e-34 149.8 102 66.7
Duzib187G0693 Durio zibethinus HOM05D006119 ORTHO05D007641 1.5e-34 149.4 101 68.3
Potri.006G186500 Populus trichocarpa HOM05D006119 ORTHO05D007641 1.5e-34 149.4 100 67.0
C03p14650 Brassica napus HOM05D006119 ORTHO05D007641 1.9e-34 149.1 100 69.0
ClCG06G012280 Citrullus lanatus HOM05D006119 ORTHO05D007641 1.9e-34 149.1 100 67.0
Thhalv10015049m.g Eutrema salsugineum HOM05D006119 ORTHO05D007641 1.9e-34 149.1 100 69.0
AT5G58005 Arabidopsis thaliana HOM05D006119 ORTHO05D007641 2.5e-34 148.7 100 68.0
Carub.0008s1855 Capsella rubella HOM05D006119 ORTHO05D007641 2.5e-34 148.7 100 69.0
CsaV3_1G028790 Cucumis sativus L. HOM05D006119 ORTHO05D007641 2.5e-34 148.7 99 67.7
Actinidia04288 Actinidia chinensis HOM05D006119 ORTHO05D007641 4.2e-34 147.9 102 68.6
CSS0002774 Camellia sinensis var. sinensis HOM05D006119 ORTHO05D007641 4.2e-34 147.9 100 70.0
CSS0027400 Camellia sinensis var. sinensis HOM05D006119 ORTHO05D007641 4.2e-34 147.9 100 70.0
Nn8g39847 Nelumbo nucifera HOM05D006119 ORTHO05D007641 4.2e-34 147.9 102 69.6
Peaxi162Scf00062g00419 Petunia axillaris HOM05D006119 ORTHO05D007641 4.2e-34 147.9 102 67.6
Potri.018G109400 Populus trichocarpa HOM05D006119 ORTHO05D007641 5.5e-34 147.5 100 68.0
Migut.K00337 Erythranthe guttata HOM05D006119 ORTHO05D007641 7.2e-34 147.1 100 68.0
Sed0003082 Sechium edule HOM05D006119 ORTHO05D007641 7.2e-34 147.1 100 66.0
Aa31LG3G13820 Aethionema arabicum HOM05D006119 ORTHO05D007641 9.4e-34 146.7 100 68.0
Oeu021261.1 Olea europaea HOM05D006119 ORTHO05D007641 9.4e-34 146.7 99 68.7
MELO3C029440.2 Cucumis melo HOM05D006119 ORTHO05D007641 1.2e-33 146.4 111 63.1
Sabra18G0092300 Salix brachista HOM05D006119 ORTHO05D007641 1.2e-33 146.4 100 67.0
FvH4_1g01100 Fragaria vesca HOM05D006119 ORTHO05D007641 2.1e-33 145.6 100 65.0
FAN19G0026 Fragaria x ananassa HOM05D006119 ORTHO05D007641 2.1e-33 145.6 100 65.0
Oeu038007.1 Olea europaea HOM05D006119 ORTHO05D007641 2.1e-33 145.6 100 69.0
TAR626G1228 Trochodendron aralioides HOM05D006119 ORTHO05D007641 2.1e-33 145.6 100 68.0
Solyc12g010150.3 Solanum lycopersicum HOM05D006119 ORTHO05D007641 2.7e-33 145.2 99 67.7
FAN26G3335 Fragaria x ananassa HOM05D006119 ORTHO05D007641 3.6e-33 144.8 100 65.0
FAN28G1026 Fragaria x ananassa HOM05D006119 ORTHO05D007641 3.6e-33 144.8 100 65.0
Cc06_g15170 Coffea canephora HOM05D006119 ORTHO05D007641 4.7e-33 144.4 102 66.7
SalBow1G1238 Salvia bowleyana HOM05D006119 ORTHO05D007641 4.7e-33 144.4 100 67.0
FAN23G1211 Fragaria x ananassa HOM05D006119 ORTHO05D007641 6.1e-33 144.1 100 64.0
Eucgr.C02591 Eucalyptus grandis HOM05D006119 ORTHO05D007641 8.0e-33 143.7 97 63.9
Eucgr.L03135 Eucalyptus grandis HOM05D006119 ORTHO05D007641 1.4e-32 142.9 97 62.9
Atru.chr7.85 Acer truncatum HOM05D006119 ORTHO05D007641 1.8e-32 142.5 98 70.4
Phvul.003G157000 Phaseolus vulgaris HOM05D006119 ORTHO05D007641 2.3e-32 142.1 98 67.3
ECA234G1280 Erigeron canadensis HOM05D006119 ORTHO05D007641 4.0e-32 141.4 100 64.0
SGA_v2.0_scaffold206G41813 Striga asiatica HOM05D006119 ORTHO05D007641 5.2e-32 141.0 100 65.0
TAR625G1054 Trochodendron aralioides HOM05D006119 ORTHO05D007641 6.8e-32 140.6 100 66.0
Hund00673 Selenicereus undatus HOM05D006119 ORTHO05D007641 1.2e-31 139.8 97 67.0
COL.COLO4_18789 Corchorus olitorius HOM05D006119 ORTHO05D007641 1.5e-31 139.4 100 63.0
Psat0ss6646g0160 Pisum sativum HOM05D006119 ORTHO05D007641 1.5e-31 139.4 104 63.5
Rhsim01G0035400 Rhododendron simsii HOM05D006119 ORTHO05D007641 1.5e-31 139.4 94 68.1
RhsimUnG0039700 Rhododendron simsii HOM05D006119 ORTHO05D007641 1.5e-31 139.4 94 68.1
Ca_21116_v3 Cicer arietinum L. HOM05D006119 ORTHO05D007641 2.0e-31 139.0 100 66.0
MBI15_g26716_MAGBIO Magnolia biondii HOM05D006119 ORTHO05D007641 3.4e-31 138.3 101 65.3
Manes.14G112500 Manihot esculenta HOM05D006119 ORTHO05D007641 4.4e-31 137.9 87 72.4
Peaxi162Scf00347g01022 Petunia axillaris HOM05D006119 ORTHO05D007641 5.7e-31 137.5 89 67.4
Sc18g0007620 Simmondsia chinensis HOM05D006119 ORTHO05D007641 5.7e-31 137.5 103 67.0
A03p12450 Brassica napus HOM05D000882 ORTHO05D001142 7.5e-31 137.1 94 66.0
BolC3t13907H Brassica oleracea HOM05D000882 ORTHO05D001142 7.5e-31 137.1 94 66.0
BraA03t10560Z Brassica rapa HOM05D000882 ORTHO05D001142 7.5e-31 137.1 94 66.0
unitig_899.g15448 Utricularia gibba HOM05D006119 ORTHO05D007641 7.5e-31 137.1 89 71.9
CDE05G1219 Ceratophyllum demersum HOM05D006119 ORTHO05D007641 9.8e-31 136.7 100 63.0
Actinidia23551 Actinidia chinensis HOM05D006119 ORTHO05D007641 1.3e-30 136.3 100 65.0
PSO111G0054 Papaver somniferum HOM05D006119 ORTHO05D007641 4.8e-30 134.4 100 61.0
CAN.G1116.12 Capsicum annuum HOM05D006119 ORTHO05D007641 8.3e-30 133.7 98 63.3
TPR.G39188 Trifolium pratense HOM05D006119 ORTHO05D007641 8.3e-30 133.7 103 63.1
Sopen07g001370 Solanum pennellii HOM05D006119 ORTHO05D007641 1.8e-29 132.5 100 60.0
Medtr4g131150 Medicago truncatula HOM05D006119 ORTHO05D007641 5.4e-29 131.0 102 60.8
Solyc07g005410.3 Solanum lycopersicum HOM05D006119 ORTHO05D007641 5.4e-29 131.0 100 59.0
vmacro06086 Vaccinium macrocarpon HOM05D006119 ORTHO05D007641 1.6e-28 129.4 111 56.8
PSO561G0054 Papaver somniferum HOM05D006119 ORTHO05D007641 2.0e-28 129.0 100 60.0
EL10Ac8g18851 Beta vulgaris HOM05D006119 ORTHO05D007641 4.5e-28 127.9 94 60.6
Nitab4.5_0004815g0030 Nicotiana tabacum HOM05D006119 ORTHO05D007641 5.9e-28 127.5 122 52.5
Rhsim03G0256600 Rhododendron simsii HOM05D006119 ORTHO05D007641 1.0e-27 126.7 116 56.9
HanXRQChr10g0314681 Helianthus annuus HOM05D006119 ORTHO05D007641 1.3e-27 126.3 100 58.0
ATR0739G093 Amborella trichopoda HOM05D006119 ORTHO05D007641 1.7e-27 125.9 87 64.4
Aqoxy7G03440 Aquilegia oxysepala HOM05D006119 ORTHO05D007641 1.7e-27 125.9 96 60.4
Nitab4.5_0001813g0020 Nicotiana tabacum HOM05D006119 ORTHO05D007641 2.9e-27 125.2 88 63.6
HPP92_017474 Vanilla planifolia HOM05D006119 ORTHO05D007641 2.9e-27 125.2 84 65.5
AUR62043251 Chenopodium quinoa HOM05D006119 ORTHO05D007641 1.1e-26 123.2 94 60.6
Zm00001eb041130 Zea mays HOM05D006119 ORTHO05D007641 3.3e-26 121.7 87 62.1
Actinidia38675 Actinidia chinensis HOM05D006119 ORTHO05D007641 7.2e-26 120.6 81 66.7
Nitab4.5_0001478g0060 Nicotiana tabacum HOM05D006119 ORTHO05D007641 9.5e-26 120.2 101 58.4
Os08g0441400 Oryza sativa ssp. japonica HOM05D006119 ORTHO05D007641 1.2e-25 119.8 87 62.1
Nitab4.5_0002315g0130 Nicotiana tabacum HOM05D006119 ORTHO05D007641 1.6e-25 119.4 100 59.0
DCAR_020878 Daucus carota HOM05D006119 ORTHO05D007641 1.2e-23 113.2 87 58.6
Nitab4.5_0013449g0010 Nicotiana tabacum HOM05D006119 ORTHO05D007641 1.2e-23 113.2 96 55.2
Nitab4.5_0006408g0020 Nicotiana tabacum HOM05D006119 ORTHO05D007641 4.4e-23 111.3 74 64.9
Sed0018834 Sechium edule HOM05D006119 ORTHO05D007641 4.4e-23 111.3 73 65.8
Sp6g19680 Schrenkiella parvula HOM05D006119 ORTHO05D007641 5.7e-23 110.9 72 70.8
CAN.G551.35 Capsicum annuum HOM05D006119 ORTHO05D007641 2.4e-21 105.5 75 65.3
Glyma.17G075100 Glycine max HOM05D006119 ORTHO05D007641 2.4e-21 105.5 73 68.5
PGSC0003DMG400011173 Solanum tuberosum HOM05D006119 ORTHO05D007641 2.4e-21 105.5 74 60.8
Mapoly0012s0137 Marchantia polymorpha HOM05D006119 ORTHO05D007641 1.2e-20 103.2 84 57.1
Pp3c18_18500 Physcomitrium patens HOM05D006119 ORTHO05D007641 1.6e-20 102.8 101 50.5
Pp3c21_10430 Physcomitrium patens HOM05D006119 ORTHO05D007641 2.3e-19 99.0 96 50.0
SMO137G0238 Selaginella moellendorffii HOM05D006119 ORTHO05D007641 1.1e-18 96.7 88 52.3
SEGI_38164 Sequoiadendron giganteum HOM05D006119 ORTHO05D007641 6.1e-17 90.9 75 54.7
AagrBONN_evm.TU.Sc2ySwM_228.1886 Anthoceros agrestis HOM05D006119 ORTHO05D007641 7.5e-15 84.0 68 54.4
Aqoxy4G01852 Aquilegia oxysepala HOM05D006119 ORTHO05D007641 1.7e-14 82.8 59 61.0
CDE05G1090 Ceratophyllum demersum HOM05D006119 ORTHO05D007641 1.7e-14 82.8 57 64.9
BcaNung07255 Brassica carinata HOM05D000882 ORTHO05D001142 7.8e-12 73.9 48 64.6
Nitab4.5_0003612g0050 Nicotiana tabacum HOM05D006119 ORTHO05D007641 1.0e-11 73.6 65 56.9
MBI15_g07754_MAGBIO Magnolia biondii HOM05D006119 ORTHO05D007641 6.2e-09 64.3 63 55.6
PSO339G5888 Papaver somniferum HOM05D006119 ORTHO05D007641 2.0e-07 59.3 85 40.0
Rhsim04G0128900 Rhododendron simsii HOM05D002149 ORTHO05D002154 7.5e-07 57.4 36 72.2


User provided reference genes

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