Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G0669 Cannabis sativa HOM05D007013 ORTHO05D008999 5.2e-229 797.3 397 100.0
CiPaw.12G131100 Carya illinoinensis HOM05D007013 ORTHO05D008999 5.1e-152 541.6 389 69.2
MD11G1215400 Malus domestica HOM05D007013 ORTHO05D008999 1.1e-151 540.4 389 67.9
QL08p009594 Quercus lobata HOM05D007013 ORTHO05D008999 7.4e-151 537.7 396 67.9
RcHm_v2.0_Chr5g0033071 Rosa chinensis HOM05D007013 ORTHO05D008999 1.8e-149 533.1 386 67.6
Cfa020325 Carpinus fangiana HOM05D007013 ORTHO05D008999 3.1e-149 532.3 389 66.6
FvH4_3g19730 Fragaria vesca HOM05D007013 ORTHO05D008999 3.1e-149 532.3 386 67.9
Duzib213G0396 Durio zibethinus HOM05D007013 ORTHO05D008999 2.0e-148 529.6 389 67.1
Thecc.07G033700 Theobroma cacao HOM05D007013 ORTHO05D008999 3.4e-148 528.9 389 67.6
Atru.chr2.3453 Acer truncatum HOM05D007013 ORTHO05D008999 2.9e-147 525.8 388 68.0
Potri.001G418800 Populus trichocarpa HOM05D007013 ORTHO05D008999 2.9e-147 525.8 388 65.7
Ciclev10008561m.g Citrus clementina HOM05D007013 ORTHO05D008999 1.4e-144 516.9 392 66.1
GSVIVG01037670001 Vitis vinifera HOM05D007013 ORTHO05D008999 1.5e-143 513.5 393 64.1
Gohir.D01G068100 Gossypium hirsutum HOM05D007013 ORTHO05D008999 4.8e-142 508.4 389 64.0
Gorai.002G090100 Gossypium raimondii HOM05D007013 ORTHO05D008999 6.3e-142 508.1 389 63.8
TWI38G0247 Tripterygium wilfordii HOM05D007013 ORTHO05D008999 1.5e-140 503.4 389 63.2
TAR624G0955 Trochodendron aralioides HOM05D007013 ORTHO05D008999 1.7e-139 500.0 391 63.4
FAN16G1225 Fragaria x ananassa HOM05D007013 ORTHO05D008999 9.4e-138 494.2 390 63.3
Glyma.08G318300 Glycine max HOM05D007013 ORTHO05D008999 3.1e-133 479.2 394 60.4
Haze_09698 Corylus avellana HOM05D007013 ORTHO05D008999 7.0e-133 478.0 359 64.9
Eucgr.F03478 Eucalyptus grandis HOM05D007013 ORTHO05D008999 1.5e-132 476.9 399 59.4
vmacro02226 Vaccinium macrocarpon HOM05D007013 ORTHO05D008999 1.5e-132 476.9 392 61.2
CSS0027260 Camellia sinensis var. sinensis HOM05D007013 ORTHO05D008999 2.6e-132 476.1 393 61.6
Hma1.2p1_0036F.1_g023520 Hydrangea macrophylla HOM05D007013 ORTHO05D008999 1.7e-131 473.4 394 61.7
TPR.G33766 Trifolium pratense HOM05D007013 ORTHO05D008999 1.7e-131 473.4 392 62.0
Medtr3g052590 Medicago truncatula HOM05D007013 ORTHO05D008999 2.9e-131 472.6 392 59.9
Actinidia05088 Actinidia chinensis HOM05D007013 ORTHO05D008999 9.4e-130 467.6 394 61.2
Lj6g0002864 Lotus japonicus HOM05D007013 ORTHO05D008999 9.4e-130 467.6 391 60.9
Cpa.g.sc12.289 Carica papaya HOM05D007013 ORTHO05D008999 1.6e-129 466.8 390 60.8
THA.LOC104825406 Tarenaya hassleriana HOM05D007013 ORTHO05D008999 1.6e-129 466.8 393 59.0
Lalb_Chr18g0049881 Lupinus albus HOM05D007013 ORTHO05D008999 3.6e-129 465.7 387 60.2
VMungo0540G0725 Vigna mungo HOM05D007013 ORTHO05D008999 6.1e-129 464.9 389 60.2
CAN.G337.80 Capsicum annuum HOM05D007013 ORTHO05D008999 8.0e-129 464.5 394 60.2
EL10Ac4g07781 Beta vulgaris HOM05D007013 ORTHO05D008999 1.8e-128 463.4 389 59.4
Hund01977 Selenicereus undatus HOM05D007013 ORTHO05D008999 3.0e-128 462.6 389 58.4
MELO3C013155.2 Cucumis melo HOM05D007013 ORTHO05D008999 5.2e-128 461.8 386 60.1
PSO541G1885 Papaver somniferum HOM05D007013 ORTHO05D008999 8.8e-128 461.1 402 58.0
arahy.Tifrunner.gnm1.ann1.YL2AFE Arachis hypogaea HOM05D007013 ORTHO05D008999 3.3e-127 459.1 399 58.1
Nitab4.5_0002287g0070 Nicotiana tabacum HOM05D007013 ORTHO05D008999 4.4e-127 458.8 396 60.6
Oeu034036.2 Olea europaea HOM05D007013 ORTHO05D008999 9.7e-127 457.6 392 59.2
COL.COLO4_09677 Corchorus olitorius HOM05D007013 ORTHO05D008999 2.2e-126 456.4 389 61.4
AL3G34260 Arabidopsis lyrata HOM05D007013 ORTHO05D008999 3.7e-126 455.7 387 59.2
CsaV3_7G021910 Cucumis sativus L. HOM05D007013 ORTHO05D008999 4.8e-126 455.3 386 58.8
Carub.0003s2044 Capsella rubella HOM05D007013 ORTHO05D008999 1.4e-125 453.8 390 57.9
Aa31LG8G7290 Aethionema arabicum HOM05D007013 ORTHO05D008999 2.4e-125 453.0 390 57.9
PSO675G8214 Papaver somniferum HOM05D007013 ORTHO05D008999 3.1e-125 452.6 407 57.2
Psat5g177160 Pisum sativum HOM05D007013 ORTHO05D008999 4.1e-125 452.2 397 57.2
Nitab4.5_0005590g0010 Nicotiana tabacum HOM05D007013 ORTHO05D008999 7.0e-125 451.4 396 59.8
Thhalv10020871m.g Eutrema salsugineum HOM05D007013 ORTHO05D008999 9.1e-125 451.1 392 58.7
BcaB07g30535 Brassica carinata HOM05D007013 ORTHO05D008999 2.6e-124 449.5 387 58.4
MSTRG.14440 Avicennia marina HOM05D007013 ORTHO05D008999 7.7e-124 448.0 388 58.2
Sabra16G0284300 Salix brachista HOM05D007013 ORTHO05D008999 7.7e-124 448.0 388 58.0
BraA02t07867Z Brassica rapa HOM05D007013 ORTHO05D008999 1.0e-123 447.6 390 57.2
Cc05_g13940 Coffea canephora HOM05D007013 ORTHO05D008999 3.8e-123 445.7 392 57.9
C02p44890 Brassica napus HOM05D007013 ORTHO05D008999 1.9e-122 443.4 390 56.9
BolC2t10525H Brassica oleracea HOM05D007013 ORTHO05D008999 3.2e-122 442.6 390 56.4
Sp2g09120 Schrenkiella parvula HOM05D007013 ORTHO05D008999 7.2e-122 441.4 386 57.3
Sc16g0005930 Simmondsia chinensis HOM05D007013 ORTHO05D008999 1.6e-121 440.3 385 57.1
Aqoxy1G02096 Aquilegia oxysepala HOM05D007013 ORTHO05D008999 6.1e-121 438.3 391 56.8
Migut.H01815 Erythranthe guttata HOM05D007013 ORTHO05D008999 4.0e-120 435.6 391 55.8
Peaxi162Scf00235g00319 Petunia axillaris HOM05D007013 ORTHO05D008999 6.8e-120 434.9 411 55.7
ClCG09G010880 Citrullus lanatus HOM05D007013 ORTHO05D008999 2.6e-119 433.0 389 56.6
Solyc07g064710.3 Solanum lycopersicum HOM05D007013 ORTHO05D008999 4.4e-119 432.2 395 56.5
A02p28310 Brassica napus HOM05D007013 ORTHO05D008999 1.7e-118 430.3 367 58.3
Ca_14746_v3 Cicer arietinum L. HOM05D007013 ORTHO05D008999 2.8e-118 429.5 332 63.0
Nn1g07163 Nelumbo nucifera HOM05D007013 ORTHO05D008999 4.8e-118 428.7 363 58.4
HanXRQChr03g0076401 Helianthus annuus HOM05D007013 ORTHO05D008999 5.3e-117 425.2 387 55.0
Prupe.4G215900 Prunus persica HOM05D007013 ORTHO05D008999 7.0e-117 424.9 392 57.4
Ah.06g182900 Amaranthus hybridus HOM05D007013 ORTHO05D008999 5.9e-116 421.8 385 54.3
Manes.15G070387 Manihot esculenta HOM05D007013 ORTHO05D008999 2.9e-115 419.5 316 65.5
AUR62020414 Chenopodium quinoa HOM05D007013 ORTHO05D008999 3.8e-115 419.1 361 57.1
ECA240G2937 Erigeron canadensis HOM05D007013 ORTHO05D008999 6.5e-115 418.3 386 53.9
FAN11G2199 Fragaria x ananassa HOM05D007013 ORTHO05D008999 1.1e-114 417.5 386 57.5
Sed0023076 Sechium edule HOM05D007013 ORTHO05D008999 4.7e-113 412.1 344 60.5
DCAR_012723 Daucus carota HOM05D007013 ORTHO05D008999 9.8e-111 404.4 393 53.4
unitig_578.g16279 Utricularia gibba HOM05D001434 ORTHO05D008999 6.3e-110 401.7 381 53.5
BcaC03g16648 Brassica carinata HOM05D007013 ORTHO05D008999 1.6e-108 397.1 345 57.4
HPP92_012407 Vanilla planifolia HOM05D007013 ORTHO05D008999 1.0e-107 394.4 392 51.8
Sopen07g032910 Solanum pennellii HOM05D007013 ORTHO05D008999 1.2e-105 387.5 350 57.7
Lsat_1_v5_gn_9_93121 Lactuca sativa HOM05D007013 ORTHO05D008999 1.6e-105 387.1 388 53.6
arahy.Tifrunner.gnm1.ann1.PYQ1JD Arachis hypogaea HOM05D007013 ORTHO05D008999 3.6e-105 386.0 314 60.8
Hma1.2p1_0036F.1_g023530 Hydrangea macrophylla HOM05D007013 ORTHO05D008999 5.2e-104 382.1 321 61.7
SGA_v2.0_scaffold363G49936 Striga asiatica HOM05D007013 ORTHO05D008999 1.1e-101 374.4 418 46.7
ATR0794G085 Amborella trichopoda HOM05D007013 ORTHO05D008999 2.5e-98 363.2 316 58.2
AT3G20480 Arabidopsis thaliana HOM05D007013 ORTHO05D008999 8.3e-94 348.2 309 56.0
Phvul.006G045700 Phaseolus vulgaris HOM05D007013 ORTHO05D008999 8.3e-94 348.2 297 59.9
Dinv22254 Davidia involucrata HOM05D007013 ORTHO05D008999 1.9e-93 347.1 266 65.4
AUR62015801 Chenopodium quinoa HOM05D007013 ORTHO05D008999 5.0e-91 339.0 296 56.8
Lj1A874G27 Lonicera japonica HOM05D007013 ORTHO05D008999 1.1e-85 321.2 290 57.2
Gohir.A01G080900 Gossypium hirsutum HOM05D007013 ORTHO05D008999 2.7e-84 316.6 238 63.0
PGSC0003DMG400022313 Solanum tuberosum HOM05D007013 ORTHO05D008999 4.3e-82 309.3 284 55.3
Mapoly0002s0307 Marchantia polymorpha HOM05D007013 ORTHO05D008999 1.8e-80 303.9 390 44.1
SMO367G1261 Selaginella moellendorffii HOM05D007013 ORTHO05D008999 2.4e-77 293.5 374 42.5
Rhsim06G0218600 Rhododendron simsii HOM05D007013 ORTHO05D008999 1.3e-75 287.7 268 57.1
SEGI_14581 Sequoiadendron giganteum HOM05D007013 ORTHO05D008999 1.5e-63 247.7 254 52.4
CARHR096240 Cardamine hirsuta HOM05D007013 ORTHO05D008999 2.4e-61 240.4 212 55.2
Zm00001eb030850 Zea mays HOM05D007013 ORTHO05D008999 1.3e-54 218.0 231 54.1
Glyma.18G095300 Glycine max HOM05D007013 ORTHO05D008999 3.5e-52 209.9 214 50.9
Pp3c19_1630 Physcomitrium patens HOM05D007013 ORTHO05D008999 2.5e-50 203.8 391 35.0
AagrBONN_evm.TU.Sc2ySwM_228.2947 Anthoceros agrestis HOM05D000001 ORTHO05D000003 9.0e-48 195.3 284 40.5
Glyma.18G095150 Glycine max HOM05D007013 ORTHO05D008999 2.5e-45 187.2 286 40.2
Os07g0102000 Oryza sativa ssp. japonica HOM05D007013 ORTHO05D008999 5.7e-42 176.0 198 46.0
CBR_g39764 Chara braunii HOM05D007013 ORTHO05D008999 3.7e-41 173.3 358 32.4
CDE05G3055 Ceratophyllum demersum HOM05D007013 ORTHO05D008999 1.1e-32 145.2 236 40.3
FAN16G0901 Fragaria x ananassa HOM05D007013 ORTHO05D008999 7.7e-31 139.0 99 72.7
RcHm_v2.0_Chr4g0424981 Rosa chinensis HOM05D007013 ORTHO05D008999 1.8e-24 117.9 92 58.7
TWI34G0353 Tripterygium wilfordii HOM05D007013 ORTHO05D008999 3.2e-21 107.1 131 40.5
Medtr0152s0030 Medicago truncatula HOM05D007013 ORTHO05D008999 8.0e-12 75.9 101 40.6
SEGI_13858 Sequoiadendron giganteum HOM05D007013 ORTHO05D008999 2.3e-11 74.3 94 42.6
Zm00001eb030810 Zea mays HOM05D007013 ORTHO05D008999 1.3e-09 68.6 92 40.2
Rhsim06G0218700 Rhododendron simsii HOM05D007013 ORTHO05D008999 5.3e-08 63.2 50 54.0
Medtr0152s0050 Medicago truncatula HOM05D007013 ORTHO05D008999 1.7e-06 58.2 70 42.9


User provided reference genes

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