Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G0581 Cannabis sativa HOM05D006784 ORTHO05D008508 2.7e-194 681.8 341 100.0
Dinv08766 Davidia involucrata HOM05D006784 ORTHO05D008508 1.5e-128 463.4 334 71.0
CSS0003574 Camellia sinensis var. sinensis HOM05D006784 ORTHO05D008508 3.4e-128 462.2 330 70.9
RcHm_v2.0_Chr6g0249611 Rosa chinensis HOM05D006784 ORTHO05D008508 9.9e-128 460.7 329 71.4
Atru.chr13.2579 Acer truncatum HOM05D006784 ORTHO05D008508 8.4e-127 457.6 300 74.3
QL09p001285 Quercus lobata HOM05D006784 ORTHO05D008508 1.9e-126 456.4 350 68.6
GSVIVG01037159001 Vitis vinifera HOM05D006784 ORTHO05D008508 2.4e-126 456.1 302 75.8
FvH4_2g00320 Fragaria vesca HOM05D006784 ORTHO05D008508 3.2e-126 455.7 324 70.4
Manes.02G202800 Manihot esculenta HOM05D006784 ORTHO05D008508 7.8e-125 451.1 328 68.9
Oeu035045.1 Olea europaea HOM05D006784 ORTHO05D008508 1.1e-123 447.2 314 69.7
Thecc.08G168600 Theobroma cacao HOM05D006784 ORTHO05D008508 1.5e-123 446.8 324 69.4
Potri.013G095300 Populus trichocarpa HOM05D006784 ORTHO05D008508 1.9e-123 446.4 298 73.5
DCAR_003507 Daucus carota HOM05D006784 ORTHO05D008508 2.8e-122 442.6 305 70.5
TAR376G1107 Trochodendron aralioides HOM05D006784 ORTHO05D008508 2.8e-122 442.6 284 77.1
Sabra13G0081300 Salix brachista HOM05D006784 ORTHO05D008508 3.6e-122 442.2 337 67.7
Actinidia01543 Actinidia chinensis HOM05D006784 ORTHO05D008508 6.2e-122 441.4 330 68.2
Rhsim12G0001900 Rhododendron simsii HOM05D006784 ORTHO05D008508 1.4e-121 440.3 336 68.5
Lalb_Chr15g0080091 Lupinus albus HOM05D006784 ORTHO05D008508 1.8e-121 439.9 303 69.6
Nn5g27234 Nelumbo nucifera HOM05D006784 ORTHO05D008508 1.5e-120 436.8 303 71.6
ClCG08G001730 Citrullus lanatus HOM05D006784 ORTHO05D008508 2.0e-120 436.4 323 68.4
Gorai.009G262200 Gossypium raimondii HOM05D006784 ORTHO05D008508 5.8e-120 434.9 304 70.1
Cc10_g16080 Coffea canephora HOM05D006784 ORTHO05D008508 4.2e-118 428.7 296 70.6
MELO3C022124.2 Cucumis melo HOM05D006784 ORTHO05D008508 5.4e-118 428.3 337 65.6
PSO761G0491 Papaver somniferum HOM05D006784 ORTHO05D008508 9.3e-118 427.6 301 68.1
Ciclev10021219m.g Citrus clementina HOM05D006784 ORTHO05D008508 1.6e-117 426.8 323 67.2
ECA232G1810 Erigeron canadensis HOM05D006784 ORTHO05D008508 1.0e-116 424.1 299 68.6
CsaV3_5G039470 Cucumis sativus L. HOM05D006784 ORTHO05D008508 1.7e-116 423.3 331 65.6
Migut.C01398 Erythranthe guttata HOM05D006784 ORTHO05D008508 1.1e-115 420.6 298 69.5
PSO210G0863 Papaver somniferum HOM05D006784 ORTHO05D008508 1.5e-115 420.2 301 66.4
Sed0009601 Sechium edule HOM05D006784 ORTHO05D008508 1.9e-115 419.9 329 64.7
TPR.G25500 Trifolium pratense HOM05D006784 ORTHO05D008508 1.9e-115 419.9 303 67.0
MBI03_g07138_MAGBIO Magnolia biondii HOM05D006784 ORTHO05D008508 1.3e-114 417.2 301 69.4
Sopen11g020490 Solanum pennellii HOM05D006784 ORTHO05D008508 1.3e-114 417.2 301 68.1
Glyma.04G110300 Glycine max HOM05D006784 ORTHO05D008508 6.2e-114 414.8 301 67.1
Medtr3g006210 Medicago truncatula HOM05D006784 ORTHO05D008508 4.0e-113 412.1 291 67.0
arahy.Tifrunner.gnm1.ann1.9TUP5I Arachis hypogaea HOM05D006784 ORTHO05D008508 2.6e-112 409.5 304 67.4
Eucgr.F02928 Eucalyptus grandis HOM05D006784 ORTHO05D008508 4.9e-111 405.2 324 64.8
HanXRQChr09g0266871 Helianthus annuus HOM05D006784 ORTHO05D008508 8.4e-111 404.4 300 65.3
arahy.Tifrunner.gnm1.ann1.VA03RP Arachis hypogaea HOM05D006784 ORTHO05D008508 3.2e-110 402.5 302 66.6
Thhalv10019786m.g Eutrema salsugineum HOM05D006784 ORTHO05D008508 3.2e-110 402.5 298 64.1
Glyma.06G323800 Glycine max HOM05D006784 ORTHO05D008508 7.1e-110 401.4 301 66.8
AL2G31000 Arabidopsis lyrata HOM05D006784 ORTHO05D008508 1.6e-109 400.2 322 60.9
FAN24G3159 Fragaria x ananassa HOM05D006784 ORTHO05D008508 1.6e-109 400.2 271 73.1
EL10Ac1g01284 Beta vulgaris HOM05D006784 ORTHO05D008508 2.1e-109 399.8 305 65.9
Lsat_1_v5_gn_4_133060 Lactuca sativa HOM05D006784 ORTHO05D008508 2.1e-109 399.8 288 67.0
Aa31LG4G9210 Aethionema arabicum HOM05D006784 ORTHO05D008508 2.7e-109 399.4 326 61.3
CARHR064620 Cardamine hirsuta HOM05D006784 ORTHO05D008508 3.5e-109 399.1 298 63.4
AT1G71340 Arabidopsis thaliana HOM05D006784 ORTHO05D008508 3.9e-108 395.6 298 62.4
Sp5g26500 Schrenkiella parvula HOM05D006784 ORTHO05D008508 5.1e-108 395.2 300 61.7
Sc23g0000020 Simmondsia chinensis HOM05D006784 ORTHO05D008508 4.3e-107 392.1 287 66.2
A07p37620 Brassica napus HOM05D006784 ORTHO05D008508 3.6e-106 389.0 323 58.8
Carub.0002s1820 Capsella rubella HOM05D006784 ORTHO05D008508 3.6e-106 389.0 298 61.7
Phvul.005G002500 Phaseolus vulgaris HOM05D006784 ORTHO05D008508 8.1e-106 387.9 290 64.5
BraA07t31326Z Brassica rapa HOM05D006784 ORTHO05D008508 1.1e-105 387.5 322 58.7
VMungo1080G0261 Vigna mungo HOM05D001255 ORTHO05D001246 1.1e-105 387.5 291 62.5
Hund26939 Selenicereus undatus HOM05D006784 ORTHO05D008508 1.4e-105 387.1 293 64.2
BcaB03g14890 Brassica carinata HOM05D006784 ORTHO05D008508 2.6e-104 382.9 322 58.4
Lj7A416T40 Lonicera japonica HOM05D006784 ORTHO05D008508 2.6e-104 382.9 288 68.8
THA.LOC104809757 Tarenaya hassleriana HOM05D006784 ORTHO05D008508 5.8e-104 381.7 320 58.4
ATR1089G080 Amborella trichopoda HOM05D006784 ORTHO05D008508 1.3e-103 380.6 298 62.4
HPP92_019449 Vanilla planifolia HOM05D006784 ORTHO05D008508 2.2e-103 379.8 301 61.8
CAN.G567.5 Capsicum annuum HOM05D006784 ORTHO05D008508 2.4e-102 376.3 268 68.7
Nitab4.5_0000079g0180 Nicotiana tabacum HOM05D006784 ORTHO05D008508 9.3e-102 374.4 355 55.8
C06p45390 Brassica napus HOM05D006784 ORTHO05D008508 2.1e-101 373.2 332 56.0
BcaC08g46565 Brassica carinata HOM05D006784 ORTHO05D008508 3.5e-101 372.5 332 56.3
BolC6t39596H Brassica oleracea HOM05D006784 ORTHO05D008508 3.5e-101 372.5 315 58.4
unitig_46.g17979 Utricularia gibba HOM05D006784 ORTHO05D008508 1.9e-99 366.7 303 59.4
Lj3g0009982 Lotus japonicus HOM05D006784 ORTHO05D008508 3.1e-97 359.4 327 56.0
TWI12G0477 Tripterygium wilfordii HOM05D006784 ORTHO05D008508 3.1e-97 359.4 278 66.2
Gohir.A05G248533 Gossypium hirsutum HOM05D006784 ORTHO05D008508 2.6e-96 356.3 256 68.0
AUR62038543 Chenopodium quinoa HOM05D006784 ORTHO05D008508 5.8e-96 355.1 294 61.9
Duzib177G0427 Durio zibethinus HOM05D006784 ORTHO05D008508 1.9e-94 350.1 308 58.4
AUR62013392 Chenopodium quinoa HOM05D006784 ORTHO05D008508 3.2e-94 349.4 293 61.8
PGR119G1188 Punica granatum HOM05D006784 ORTHO05D008508 3.0e-92 342.8 326 55.8
SEGI_09486 Sequoiadendron giganteum HOM05D006784 ORTHO05D008508 1.9e-91 340.1 303 55.1
vmacro00953 Vaccinium macrocarpon HOM05D006784 ORTHO05D008508 1.9e-91 340.1 319 57.7
Nitab4.5_0001489g0040 Nicotiana tabacum HOM05D006784 ORTHO05D008508 3.8e-87 325.9 301 58.5
CiPaw.03G012700 Carya illinoinensis HOM05D006784 ORTHO05D008508 2.2e-82 310.1 203 74.4
SGA_v2.0_scaffold118G32637 Striga asiatica HOM05D006784 ORTHO05D008508 1.3e-79 300.8 352 52.0
Prupe.8G003500 Prunus persica HOM05D006784 ORTHO05D008508 7.2e-78 295.0 212 69.8
Aqoxy5G01860 Aquilegia oxysepala HOM05D006784 ORTHO05D008508 3.6e-77 292.7 205 70.7
Cpa.g.sc142.7 Carica papaya HOM05D006784 ORTHO05D008508 1.4e-73 280.8 268 57.5
FAN19G1248 Fragaria x ananassa HOM05D006784 ORTHO05D008508 3.1e-73 279.6 279 56.6
Solyc11g045040.2 Solanum lycopersicum HOM05D006784 ORTHO05D008508 4.5e-72 275.8 206 66.5
Mapoly0041s0058 Marchantia polymorpha HOM05D006784 ORTHO05D008508 1.3e-71 274.2 305 44.9
Ca_13985_v3 Cicer arietinum L. HOM05D006784 ORTHO05D008508 2.9e-71 273.1 205 63.4
Psat5g232280 Pisum sativum HOM05D006784 ORTHO05D008508 2.1e-69 266.9 210 61.0
CDE08G1443 Ceratophyllum demersum HOM05D006784 ORTHO05D008508 5.3e-65 252.3 243 56.4
Haze_14004 Corylus avellana HOM05D006784 ORTHO05D008508 2.6e-59 233.4 345 43.8
Gohir.D05G250801 Gossypium hirsutum HOM05D006784 ORTHO05D008508 7.5e-59 231.9 170 68.8
TWI12G0001 Tripterygium wilfordii HOM05D006784 ORTHO05D008508 1.6e-56 224.2 291 46.4
AagrBONN_evm.TU.Sc2ySwM_344.2721 Anthoceros agrestis HOM05D006784 ORTHO05D008508 4.5e-56 222.6 297 41.8
Ah.05g170450 Amaranthus hybridus HOM05D006784 ORTHO05D008508 1.3e-50 204.5 291 42.3
COL.COLO4_25079 Corchorus olitorius HOM05D006784 ORTHO05D008508 2.7e-48 196.8 124 73.4
Zm00001eb167850 Zea mays HOM05D006784 ORTHO05D008508 2.1e-45 187.2 211 46.0
HPP92_019452 Vanilla planifolia HOM05D006784 ORTHO05D008508 3.5e-40 169.9 126 64.3
FAN20G3191 Fragaria x ananassa HOM05D006784 ORTHO05D008508 1.3e-39 167.9 119 70.6
Peaxi162Scf00078g01023 Petunia axillaris HOM05D006784 ORTHO05D008508 3.8e-39 166.4 143 59.4
Cre02.g115750 Chlamydomonas reinhardtii HOM05D006784 ORTHO05D008508 1.5e-38 164.5 295 33.2
Peaxi162Scf00078g01017 Petunia axillaris HOM05D006784 ORTHO05D008508 3.4e-35 153.3 97 74.2
Hma1.2p1_0238F.1_g099740 Hydrangea macrophylla HOM05D006784 ORTHO05D008508 8.3e-34 148.7 110 68.2
PGSC0003DMG401006664 Solanum tuberosum HOM05D006784 ORTHO05D008508 7.0e-33 145.6 96 69.8
PGSC0003DMG402006664 Solanum tuberosum HOM05D006784 ORTHO05D008508 9.2e-33 145.2 92 75.0
FvH4_2g04920 Fragaria vesca HOM05D006784 ORTHO05D008508 1.8e-28 131.0 180 45.0
MD05G1006200 Malus domestica HOM05D006784 ORTHO05D008508 9.8e-27 125.2 80 73.8
Os11g0236000 Oryza sativa ssp. japonica HOM05D006784 ORTHO05D008508 1.6e-24 117.9 80 60.0
Gorai.005G166200 Gossypium raimondii HOM05D006784 ORTHO05D008508 1.0e-23 115.2 89 62.9
Gohir.D08G237350 Gossypium hirsutum HOM05D006784 ORTHO05D008508 3.0e-23 113.6 89 61.8
MCO03G046 Micromonas commoda HOM05D006784 ORTHO05D008508 3.9e-23 113.2 283 28.3
CBR_g18896 Chara braunii HOM05D006784 ORTHO05D008508 1.1e-22 111.7 162 34.0
QL09p001297 Quercus lobata HOM05D006784 ORTHO05D008508 1.1e-22 111.7 93 65.6
Atru.chr7.394 Acer truncatum HOM05D006784 ORTHO05D008508 2.9e-18 97.1 63 69.8
FAN24G0543 Fragaria x ananassa HOM05D006784 ORTHO05D008508 3.6e-13 80.1 154 35.7
FAN20G2921 Fragaria x ananassa HOM05D006784 ORTHO05D008508 4.7e-13 79.7 154 35.7
FAN20G2925 Fragaria x ananassa HOM05D006784 ORTHO05D008508 4.7e-13 79.7 154 35.7
FvH4_2g01030 Fragaria vesca HOM05D006784 ORTHO05D005195 6.8e-12 75.9 135 38.5
Gorai.004G102800 Gossypium raimondii HOM05D006784 ORTHO05D008508 1.7e-10 71.2 48 70.8
FAN20G2451 Fragaria x ananassa HOM05D009889 ORTHO05D003215 4.6e-08 63.2 40 72.5
MBI14_g30460_MAGBIO Magnolia biondii HOM05D006784 ORTHO05D014525 5.1e-07 59.7 38 76.3


User provided reference genes

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