Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G0546 Cannabis sativa HOM05D007073 ORTHO05D008855 4.6e-56 221.1 118 100.0
CANSAT11G2499 Cannabis sativa HOM05D007073 ORTHO05D008855 8.9e-52 206.8 122 91.8
CANSAT25G0010 Cannabis sativa HOM05D007073 ORTHO05D008855 9.8e-43 176.8 105 85.7
Haze_22602 Corylus avellana HOM05D000624 ORTHO05D000495 3.2e-41 171.8 109 78.9
CSS0049768 Camellia sinensis var. sinensis HOM05D007073 ORTHO05D008855 4.6e-40 167.9 108 79.6
Atru.chr13.338 Acer truncatum HOM05D007073 ORTHO05D008855 6.6e-39 164.1 103 80.6
Dinv31819 Davidia involucrata HOM05D007073 ORTHO05D008855 6.6e-39 164.1 104 80.8
GSVIVG01009840001 Vitis vinifera HOM05D007073 ORTHO05D008855 8.6e-39 163.7 106 78.3
Hma1.2p1_0773F.1_g216240 Hydrangea macrophylla HOM05D007073 ORTHO05D008855 1.5e-38 162.9 106 79.2
RhsimUnG0148500 Rhododendron simsii HOM05D007073 ORTHO05D008855 1.5e-38 162.9 108 78.7
RcHm_v2.0_Chr6g0272121 Rosa chinensis HOM05D007073 ORTHO05D008855 1.5e-38 162.9 108 75.9
FvH4_5g30190 Fragaria vesca HOM05D007073 ORTHO05D008855 2.5e-38 162.2 108 75.9
PGR031G0624 Punica granatum HOM05D007073 ORTHO05D008855 3.3e-38 161.8 114 73.7
COL.COLO4_26179 Corchorus olitorius HOM05D007073 ORTHO05D008855 9.5e-38 160.2 105 76.2
TWI56G0686 Tripterygium wilfordii HOM05D007073 ORTHO05D008855 1.6e-37 159.5 109 74.3
HanXRQChr02g0044001 Helianthus annuus HOM05D007073 ORTHO05D008855 2.1e-37 159.1 107 74.8
Sabra05G0182000 Salix brachista HOM05D007073 ORTHO05D008855 2.1e-37 159.1 110 70.9
vmacro21707 Vaccinium macrocarpon HOM05D007073 ORTHO05D008855 2.1e-37 159.1 107 76.6
QL02p010904 Quercus lobata HOM05D007073 ORTHO05D008855 3.6e-37 158.3 111 70.3
Eucgr.H01040 Eucalyptus grandis HOM05D007073 ORTHO05D008855 6.2e-37 157.5 103 78.6
Potri.005G235800 Populus trichocarpa HOM05D007073 ORTHO05D008855 6.2e-37 157.5 110 70.9
RcHm_v2.0_Chr6g0302381 Rosa chinensis HOM05D007073 ORTHO05D008855 6.2e-37 157.5 108 75.0
Eucgr.L01253 Eucalyptus grandis HOM05D007073 ORTHO05D008855 8.1e-37 157.1 103 77.7
TAR628G0116 Trochodendron aralioides HOM05D007073 ORTHO05D008855 8.1e-37 157.1 106 75.5
PGSC0003DMG400003718 Solanum tuberosum HOM05D007073 ORTHO05D008855 1.8e-36 156.0 102 77.5
Lj4g0003370 Lotus japonicus HOM05D007073 ORTHO05D008855 2.3e-36 155.6 105 74.3
MD08G1016500 Malus domestica HOM05D007073 ORTHO05D008855 2.3e-36 155.6 111 71.2
Rhsim06G0025500 Rhododendron simsii HOM05D000624 ORTHO05D000495 4.0e-36 154.8 103 77.7
Solyc04g081160.3 Solanum lycopersicum HOM05D007073 ORTHO05D008855 5.2e-36 154.5 102 76.5
Sopen04g034780 Solanum pennellii HOM05D007073 ORTHO05D008855 5.2e-36 154.5 102 76.5
Lalb_Chr12g0205331 Lupinus albus HOM05D007073 ORTHO05D008855 1.2e-35 153.3 106 71.7
PSO675G5408 Papaver somniferum HOM05D007073 ORTHO05D008855 1.2e-35 153.3 113 63.7
Peaxi162Scf00287g01620 Petunia axillaris HOM05D007073 ORTHO05D008855 2.6e-35 152.1 102 72.5
Duzib093G1738 Durio zibethinus HOM05D007073 ORTHO05D008855 3.4e-35 151.8 104 72.1
PSO541G6379 Papaver somniferum HOM05D007073 ORTHO05D008855 3.4e-35 151.8 113 62.8
ClCG08G014440 Citrullus lanatus HOM05D007073 ORTHO05D008855 4.4e-35 151.4 111 70.3
Lsat_1_v5_gn_1_16141 Lactuca sativa HOM05D007073 ORTHO05D008855 4.4e-35 151.4 113 67.3
AUR62019145 Chenopodium quinoa HOM05D007073 ORTHO05D008855 5.8e-35 151.0 106 71.7
ECA247G1834 Erigeron canadensis HOM05D007073 ORTHO05D008855 5.8e-35 151.0 106 71.7
Nn5g29254 Nelumbo nucifera HOM05D007073 ORTHO05D008855 5.8e-35 151.0 106 74.5
Phvul.002G236200 Phaseolus vulgaris HOM05D007073 ORTHO05D008855 5.8e-35 151.0 105 71.4
Glyma.08G113800 Glycine max HOM05D007073 ORTHO05D008855 7.6e-35 150.6 104 71.2
Sed0011824 Sechium edule HOM05D007073 ORTHO05D008855 7.6e-35 150.6 112 68.8
VMungo0251G2135 Vigna mungo HOM05D007073 ORTHO05D008855 7.6e-35 150.6 105 71.4
Migut.C00802 Erythranthe guttata HOM05D007073 ORTHO05D008855 9.9e-35 150.2 106 71.7
CAN.G1271.5 Capsicum annuum HOM05D007073 ORTHO05D008855 1.7e-34 149.4 102 74.5
SGA_v2.0_scaffold92G28274 Striga asiatica HOM05D007073 ORTHO05D008855 1.7e-34 149.4 107 72.0
Carub.0001s2918 Capsella rubella HOM05D007073 ORTHO05D008855 2.2e-34 149.1 114 70.2
CDE08G0828 Ceratophyllum demersum HOM05D007073 ORTHO05D008855 3.8e-34 148.3 108 69.4
CsaV3_2G029360 Cucumis sativus L. HOM05D007073 ORTHO05D008855 3.8e-34 148.3 112 68.8
Psat7g072280 Pisum sativum HOM05D007073 ORTHO05D008855 4.9e-34 147.9 107 71.0
BcaB07g32745 Brassica carinata HOM05D007073 ORTHO05D008855 6.4e-34 147.5 114 67.5
SalBow7G2056 Salvia bowleyana HOM05D007073 ORTHO05D008855 6.4e-34 147.5 106 70.8
unitig_32.g11146 Utricularia gibba HOM05D007073 ORTHO05D008855 6.4e-34 147.5 106 71.7
Cc04_g14740 Coffea canephora HOM05D007073 ORTHO05D008855 8.4e-34 147.1 102 71.6
Thhalv10009135m.g Eutrema salsugineum HOM05D007073 ORTHO05D008855 8.4e-34 147.1 104 73.1
EL10Ac1g00450 Beta vulgaris HOM05D007073 ORTHO05D008855 1.1e-33 146.7 110 66.4
A09p35370 Brassica napus HOM05D007073 ORTHO05D008855 1.1e-33 146.7 114 69.3
CARHR030330 Cardamine hirsuta HOM05D007073 ORTHO05D008855 1.1e-33 146.7 104 73.1
Zm00001eb001980 Zea mays HOM05D007073 ORTHO05D008855 1.1e-33 146.7 111 67.6
BcaC05g27117 Brassica carinata HOM05D007073 ORTHO05D008855 1.9e-33 146.0 114 68.4
BcaC05g27119 Brassica carinata HOM05D007073 ORTHO05D008855 1.9e-33 146.0 114 68.4
C05p29970 Brassica napus HOM05D007073 ORTHO05D008855 1.9e-33 146.0 114 68.4
BolC5t31732H Brassica oleracea HOM05D007073 ORTHO05D008855 1.9e-33 146.0 114 68.4
BolC5t31736H Brassica oleracea HOM05D007073 ORTHO05D008855 1.9e-33 146.0 114 68.4
Manes.18G016450 Manihot esculenta HOM05D007073 ORTHO05D008855 1.9e-33 146.0 108 68.5
Zm00001eb403590 Zea mays HOM05D007073 ORTHO05D008855 1.9e-33 146.0 111 65.8
Oeu054729.1 Olea europaea HOM05D007073 ORTHO05D008855 2.4e-33 145.6 104 71.2
Aa31LG6G9870 Aethionema arabicum HOM05D007073 ORTHO05D008855 3.2e-33 145.2 104 71.2
SGA_v2.0_scaffold92G28275 Striga asiatica HOM05D007073 ORTHO05D008855 3.2e-33 145.2 107 71.0
Glyma.05G155900 Glycine max HOM05D007073 ORTHO05D008855 4.1e-33 144.8 104 68.3
TPR.G24371 Trifolium pratense HOM05D007073 ORTHO05D008855 4.1e-33 144.8 103 70.9
Ca_17949_v3 Cicer arietinum L. HOM05D007073 ORTHO05D008855 5.4e-33 144.4 103 69.9
Sp1g26740 Schrenkiella parvula HOM05D007073 ORTHO05D008855 5.4e-33 144.4 104 72.1
HPP92_025607 Vanilla planifolia HOM05D007073 ORTHO05D008855 5.4e-33 144.4 108 64.8
Medtr8g085700 Medicago truncatula HOM05D007073 ORTHO05D008855 9.2e-33 143.7 104 70.2
AT1G30845 Arabidopsis thaliana HOM05D007073 ORTHO05D008855 1.2e-32 143.3 104 72.1
Cc02_g29940 Coffea canephora HOM05D007073 ORTHO05D008855 2.1e-32 142.5 102 68.6
THA.LOC104810648 Tarenaya hassleriana HOM05D007073 ORTHO05D008855 2.1e-32 142.5 102 73.5
MD15G1015600 Malus domestica HOM05D007073 ORTHO05D008855 4.6e-32 141.4 104 69.2
Prupe.1G369500 Prunus persica HOM05D007073 ORTHO05D008855 7.8e-32 140.6 109 67.0
arahy.Tifrunner.gnm1.ann1.0LW32C Arachis hypogaea HOM05D007073 ORTHO05D008855 2.3e-31 139.0 113 66.4
ATR0945G003 Amborella trichopoda HOM05D007073 ORTHO05D008855 3.9e-31 138.3 106 66.0
Sc26g0003150 Simmondsia chinensis HOM05D007073 ORTHO05D008855 3.9e-31 138.3 106 65.1
Cfa013916 Carpinus fangiana HOM05D007073 ORTHO05D008855 8.6e-31 137.1 85 81.2
MSTRG.1215 Avicennia marina HOM05D007073 ORTHO05D008855 4.3e-30 134.8 103 67.0
C05p29960 Brassica napus HOM05D007073 ORTHO05D008855 1.6e-29 132.9 96 70.8
FAN13G2867 Fragaria x ananassa HOM05D007073 ORTHO05D008855 2.8e-29 132.1 92 71.7
arahy.Tifrunner.gnm1.ann1.F1G2D9 Arachis hypogaea HOM05D007073 ORTHO05D008855 3.6e-29 131.7 136 55.9
FAN18G2174 Fragaria x ananassa HOM05D007403 ORTHO05D009306 3.6e-29 131.7 88 73.9
Actinidia26593 Actinidia chinensis HOM05D007073 ORTHO05D008855 8.1e-29 130.6 96 72.9
CiPaw.07G153100 Carya illinoinensis HOM05D007073 ORTHO05D008855 2.4e-28 129.0 86 74.4
Thecc.08G038900 Theobroma cacao HOM05D007073 ORTHO05D008855 8.9e-28 127.1 84 76.2
Ciclev10002853m.g Citrus clementina HOM05D007073 ORTHO05D008855 1.2e-27 126.7 102 65.7
AL1G45120 Arabidopsis lyrata HOM05D007073 ORTHO05D008855 5.8e-27 124.4 168 46.4
Peaxi162Scf01591g00005 Petunia axillaris HOM05D007073 ORTHO05D008855 1.7e-26 122.9 82 72.0
AUR62014408 Chenopodium quinoa HOM05D007073 ORTHO05D008855 2.9e-26 122.1 84 71.4
Gohir.A01G112900 Gossypium hirsutum HOM05D007073 ORTHO05D008855 6.4e-26 120.9 83 74.7
Nitab4.5_0005185g0010 Nicotiana tabacum HOM05D007073 ORTHO05D008855 1.9e-25 119.4 82 70.7
MELO3C010995.2 Cucumis melo HOM05D007073 ORTHO05D008855 2.4e-25 119.0 88 69.3
Os03g0127000 Oryza sativa ssp. japonica HOM05D007073 ORTHO05D008855 2.4e-25 119.0 79 73.4
Gohir.D01G101000 Gossypium hirsutum HOM05D007073 ORTHO05D008855 4.2e-25 118.2 83 72.3
Aqoxy6G02335_Aqoxy6G02336 Aquilegia oxysepala HOM05D000558 ORTHO05D001857 2.3e-23 112.5 81 70.4
Actinidia37317 Actinidia chinensis HOM05D007073 ORTHO05D008855 3.9e-23 111.7 83 66.3
SEGI_10735 Sequoiadendron giganteum HOM05D007073 ORTHO05D008855 5.6e-22 107.8 114 52.6
Eucgr.H01037 Eucalyptus grandis HOM05D007073 ORTHO05D008855 1.8e-20 102.8 71 76.1
MD13G1087600 Malus domestica HOM05D007073 ORTHO05D008855 4.9e-18 94.7 71 71.8
C05p30020 Brassica napus HOM05D007073 ORTHO05D008855 1.1e-17 93.6 91 56.0
Mapoly0121s0038 Marchantia polymorpha HOM05D007073 ORTHO05D008855 7.1e-17 90.9 105 46.7
DCAR_017499 Daucus carota HOM05D007073 ORTHO05D008855 2.7e-16 89.0 56 82.1
Pp3c8_14860 Physcomitrium patens HOM05D007073 ORTHO05D008855 8.7e-15 84.0 108 48.1
Eucgr.L01259 Eucalyptus grandis HOM05D007073 ORTHO05D008855 1.3e-13 80.1 52 75.0
BolC5t31739H Brassica oleracea HOM05D007073 ORTHO05D008855 2.8e-13 79.0 72 59.7
FAN04G0335 Fragaria x ananassa HOM05D007403 ORTHO05D009306 8.1e-13 77.4 52 71.2
arahy.Tifrunner.gnm1.ann1.JR36LC Arachis hypogaea HOM05D007073 ORTHO05D008855 1.1e-12 77.0 60 68.3
AagrBONN_evm.TU.Sc2ySwM_344.4448 Anthoceros agrestis HOM05D007073 ORTHO05D008855 5.3e-12 74.7 76 50.0
Actinidia04603 Actinidia chinensis HOM05D007073 ORTHO05D008855 4.5e-11 71.6 58 67.2
BcaC05g27114 Brassica carinata HOM05D007073 ORTHO05D008855 1.6e-08 63.2 104 40.4


User provided reference genes

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