Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G0475 Cannabis sativa HOM05D006843 ORTHO05D008517 7.0e-198 693.7 346 100.0
Gohir.A01G079900 Gossypium hirsutum HOM05D006843 ORTHO05D008517 1.1e-134 483.8 350 72.0
Thecc.07G035800 Theobroma cacao HOM05D006843 ORTHO05D008517 3.2e-134 482.3 350 72.0
Gohir.D01G067100 Gossypium hirsutum HOM05D006843 ORTHO05D008517 4.6e-133 478.4 350 71.7
Cfa020337 Carpinus fangiana HOM05D006843 ORTHO05D008517 1.4e-132 476.9 347 70.3
Haze_09681 Corylus avellana HOM05D006843 ORTHO05D008517 7.4e-131 471.1 347 70.0
Prupe.4G214500 Prunus persica HOM05D006843 ORTHO05D008517 2.8e-130 469.2 344 68.9
Gorai.002G089000 Gossypium raimondii HOM05D006843 ORTHO05D008517 4.8e-130 468.4 350 70.3
CiPaw.11G190100 Carya illinoinensis HOM05D006843 ORTHO05D008517 6.3e-130 468.0 353 68.0
CSS0043197 Camellia sinensis var. sinensis HOM05D006843 ORTHO05D008517 1.4e-129 466.8 351 67.5
QL08p010009 Quercus lobata HOM05D006843 ORTHO05D008517 1.4e-129 466.8 341 69.5
Actinidia05093 Actinidia chinensis HOM05D006843 ORTHO05D008517 2.4e-129 466.1 350 69.4
Duzib268G1400 Durio zibethinus HOM05D006843 ORTHO05D008517 3.4e-128 462.2 350 69.7
MD11G1217200 Malus domestica HOM05D006843 ORTHO05D008517 5.9e-128 461.5 344 68.0
GSVIVG01037656001 Vitis vinifera HOM05D006843 ORTHO05D008517 3.8e-127 458.8 349 68.2
Manes.03G129700 Manihot esculenta HOM05D006843 ORTHO05D008517 6.5e-127 458.0 349 68.8
Cpa.g.sc12.302 Carica papaya HOM05D006843 ORTHO05D008517 6.7e-124 448.0 353 66.6
ClCG09G010830 Citrullus lanatus HOM05D006843 ORTHO05D008517 8.8e-124 447.6 333 67.6
CiPaw.12G130200 Carya illinoinensis HOM05D006843 ORTHO05D008517 1.1e-123 447.2 350 66.3
Dinv22258 Davidia involucrata HOM05D006843 ORTHO05D008517 2.0e-123 446.4 326 69.6
Rhsim06G0217400 Rhododendron simsii HOM05D006843 ORTHO05D008517 2.6e-123 446.0 351 65.2
MELO3C013160.2 Cucumis melo HOM05D006843 ORTHO05D008517 4.4e-123 445.3 328 67.7
Glyma.14G022900 Glycine max HOM05D006843 ORTHO05D008517 1.3e-122 443.7 351 64.4
PGR083G2310 Punica granatum HOM05D006843 ORTHO05D008517 2.8e-122 442.6 354 64.1
Glyma.02G291800 Glycine max HOM05D006843 ORTHO05D008517 4.1e-121 438.7 351 64.4
CsaV3_7G021850 Cucumis sativus L. HOM05D006843 ORTHO05D008517 5.3e-121 438.3 332 66.6
Phvul.008G268300 Phaseolus vulgaris HOM05D006843 ORTHO05D008517 6.9e-121 438.0 348 64.1
Nn1g03519 Nelumbo nucifera HOM05D006843 ORTHO05D008517 9.1e-121 437.6 348 66.1
TAR624G1415 Trochodendron aralioides HOM05D006843 ORTHO05D008517 1.5e-120 436.8 344 66.3
TWI39G1240 Tripterygium wilfordii HOM05D006843 ORTHO05D008517 2.6e-120 436.0 351 65.5
Ca_06326_v3 Cicer arietinum L. HOM05D006843 ORTHO05D008517 4.5e-120 435.3 344 63.1
Eucgr.F00758 Eucalyptus grandis HOM05D006843 ORTHO05D008517 5.9e-120 434.9 354 63.8
Ciclev10008752m.g Citrus clementina HOM05D006843 ORTHO05D008517 1.3e-119 433.7 346 65.0
Lalb_Chr04g0248381 Lupinus albus HOM05D006843 ORTHO05D008517 3.8e-119 432.2 348 63.2
LjContig00272g0007634 Lotus japonicus HOM05D006843 ORTHO05D008517 5.0e-119 431.8 354 62.4
Sc03g0008560 Simmondsia chinensis HOM05D006843 ORTHO05D008517 8.5e-119 431.0 342 64.6
Nitab4.5_0003495g0070 Nicotiana tabacum HOM05D006843 ORTHO05D008517 4.2e-118 428.7 347 63.1
RcHm_v2.0_Chr5g0040061 Rosa chinensis HOM05D006843 ORTHO05D008517 7.2e-118 427.9 346 65.0
Hma1.2p1_0673F.1_g201400 Hydrangea macrophylla HOM05D006843 ORTHO05D008517 2.1e-117 426.4 303 68.6
Medtr5g092970 Medicago truncatula HOM05D006843 ORTHO05D008517 2.1e-117 426.4 352 61.9
arahy.Tifrunner.gnm1.ann1.0IA02T Arachis hypogaea HOM05D006843 ORTHO05D008517 4.7e-117 425.2 350 63.1
arahy.Tifrunner.gnm1.ann1.57CCTN Arachis hypogaea HOM05D006843 ORTHO05D008517 4.7e-117 425.2 350 63.1
arahy.Tifrunner.gnm1.ann1.BV1YAY Arachis hypogaea HOM05D006843 ORTHO05D008517 4.7e-117 425.2 350 63.1
arahy.Tifrunner.gnm1.ann1.H57FKH Arachis hypogaea HOM05D006843 ORTHO05D008517 4.7e-117 425.2 350 63.1
arahy.Tifrunner.gnm1.ann1.Q92UKX Arachis hypogaea HOM05D006843 ORTHO05D008517 4.7e-117 425.2 350 63.4
VMungo0647G1675 Vigna mungo HOM05D006843 ORTHO05D008517 6.1e-117 424.9 355 63.1
MBI18_g14135_MAGBIO Magnolia biondii HOM05D006843 ORTHO05D008517 2.3e-116 422.9 349 61.6
arahy.Tifrunner.gnm1.ann1.J1CT6Y Arachis hypogaea HOM05D006843 ORTHO05D008517 3.0e-116 422.5 350 62.9
FvH4_3g22820 Fragaria vesca HOM05D006843 ORTHO05D008517 6.7e-116 421.4 346 63.6
Psat2g011720 Pisum sativum HOM05D006843 ORTHO05D008517 1.1e-115 420.6 341 61.0
FAN16G2069 Fragaria x ananassa HOM05D006843 ORTHO05D008517 1.5e-115 420.2 346 63.9
TPR.G1211 Trifolium pratense HOM05D006843 ORTHO05D008517 6.3e-114 414.8 347 60.5
Potri.011G090700 Populus trichocarpa HOM05D006843 ORTHO05D008517 1.8e-113 413.3 359 60.7
Cc05_g13830 Coffea canephora HOM05D006843 ORTHO05D008517 9.1e-113 411.0 353 60.1
Peaxi162Scf00235g00218 Petunia axillaris HOM05D006843 ORTHO05D008517 2.6e-112 409.5 308 64.9
Sed0013659 Sechium edule HOM05D006843 ORTHO05D008517 1.0e-111 407.5 328 63.4
FAN25G2076 Fragaria x ananassa HOM05D006843 ORTHO05D008517 2.2e-111 406.4 301 67.8
MSTRG.6924 Avicennia marina HOM05D006843 ORTHO05D008517 1.1e-110 404.1 347 62.0
Nitab4.5_0007360g0010 Nicotiana tabacum HOM05D006843 ORTHO05D008517 4.2e-110 402.1 300 65.7
Migut.M01756 Erythranthe guttata HOM05D006843 ORTHO05D008517 9.4e-110 401.0 357 60.8
PGSC0003DMG402022316 Solanum tuberosum HOM05D006843 ORTHO05D008517 2.1e-109 399.8 307 64.8
AT4G26980 Arabidopsis thaliana HOM05D006843 ORTHO05D008517 2.7e-109 399.4 330 63.6
THA.LOC104809268 Tarenaya hassleriana HOM05D006843 ORTHO05D008517 6.1e-109 398.3 349 60.2
AUR62015782 Chenopodium quinoa HOM05D006843 ORTHO05D008517 1.0e-108 397.5 342 60.8
Ah.04g165900 Amaranthus hybridus HOM05D006843 ORTHO05D008517 1.8e-108 396.7 349 61.6
HanXRQChr11g0337271 Helianthus annuus HOM05D006843 ORTHO05D008517 3.0e-108 396.0 350 59.4
Sabra11G0086300 Salix brachista HOM05D006843 ORTHO05D008517 4.0e-108 395.6 348 60.6
Solyc07g064630.4 Solanum lycopersicum HOM05D006843 ORTHO05D008517 5.2e-108 395.2 307 64.5
Thhalv10025611m.g Eutrema salsugineum HOM05D006843 ORTHO05D008517 6.7e-108 394.8 329 63.2
Carub.0007s1386 Capsella rubella HOM05D006843 ORTHO05D008517 5.7e-107 391.7 301 66.1
AL7G25850 Arabidopsis lyrata HOM05D006843 ORTHO05D008517 7.5e-107 391.3 303 66.0
CARHR234590 Cardamine hirsuta HOM05D006843 ORTHO05D008517 2.2e-106 389.8 346 61.0
C07p55080 Brassica napus HOM05D006843 ORTHO05D008517 2.8e-106 389.4 348 60.3
A03p56990 Brassica napus HOM05D006843 ORTHO05D008517 8.2e-106 387.9 347 60.2
Sopen07g032830 Solanum pennellii HOM05D006843 ORTHO05D008517 1.1e-105 387.5 314 62.1
Lsat_1_v5_gn_7_109981 Lactuca sativa HOM05D006843 ORTHO05D008517 1.4e-105 387.1 307 64.8
EL10Ac4g07802 Beta vulgaris HOM05D006843 ORTHO05D008517 4.1e-105 385.6 404 54.2
BcaC06g32719 Brassica carinata HOM05D006843 ORTHO05D008517 4.5e-104 382.1 345 58.8
Aqoxy4G01855 Aquilegia oxysepala HOM05D006843 ORTHO05D008517 7.7e-104 381.3 356 57.3
ECA236G1023 Erigeron canadensis HOM05D006843 ORTHO05D008517 1.7e-103 380.2 301 64.1
Hma1.2p1_0673F.1_g201390 Hydrangea macrophylla HOM05D006843 ORTHO05D008517 1.1e-102 377.5 302 62.6
Aa31LG5G10440 Aethionema arabicum HOM05D006843 ORTHO05D008517 5.5e-102 375.2 346 58.4
SGA_v2.0_scaffold165G38275 Striga asiatica HOM05D006843 ORTHO05D008517 1.0e-100 370.9 318 59.4
DCAR_012722 Daucus carota HOM05D006843 ORTHO05D008517 2.3e-95 353.2 344 56.1
unitig_8.g4621 Utricularia gibba HOM05D006843 ORTHO05D008517 4.2e-94 349.0 330 56.1
CAN.G337.136 Capsicum annuum HOM05D006843 ORTHO05D008517 5.5e-94 348.6 269 63.6
HPP92_013325 Vanilla planifolia HOM05D006843 ORTHO05D008517 2.1e-93 346.7 348 52.3
Lj8A169G88 Lonicera japonica HOM05D006843 ORTHO05D008517 2.3e-92 343.2 298 60.4
BraA03t14769Z Brassica rapa HOM05D006843 ORTHO05D008517 1.1e-89 334.3 272 64.3
BolC7t46005H Brassica oleracea HOM05D006843 ORTHO05D008517 4.5e-88 328.9 264 64.0
AUR62020435 Chenopodium quinoa HOM05D006843 ORTHO05D008517 5.0e-87 325.5 364 50.3
Zm00001eb224560 Zea mays HOM05D006843 ORTHO05D008517 8.9e-84 314.7 265 59.6
PSO063G3629 Papaver somniferum HOM05D006843 ORTHO05D008517 1.1e-81 307.8 302 55.0
Zm00001eb273720 Zea mays HOM05D006843 ORTHO05D008517 7.0e-81 305.1 270 58.1
PSO170G2271 Papaver somniferum HOM05D006843 ORTHO05D008517 7.8e-80 301.6 305 54.1
Pp3c9_17980 Physcomitrium patens HOM05D006843 ORTHO05D008517 8.3e-74 281.6 304 52.0
Mapoly0001s0246 Marchantia polymorpha HOM05D006843 ORTHO05D008517 1.1e-73 281.2 309 50.5
Thhalv10026846m.g Eutrema salsugineum HOM05D006843 ORTHO05D008517 1.8e-60 237.3 266 51.5
Hund02000 Selenicereus undatus HOM05D006843 ORTHO05D008517 6.6e-55 218.8 211 58.3
CBR_g34195 Chara braunii HOM05D006843 ORTHO05D008517 1.1e-54 218.0 366 38.0
SMO234G0011 Selaginella moellendorffii HOM05D006843 ORTHO05D008517 1.8e-52 210.7 260 45.8
ATR0490G005 Amborella trichopoda HOM05D006843 ORTHO05D008517 5.8e-51 205.7 186 56.5
Atru.chr2.3418 Acer truncatum HOM05D006843 ORTHO05D008517 6.0e-48 195.7 133 72.9
vmacro11722 Vaccinium macrocarpon HOM05D006843 ORTHO05D008517 3.3e-46 189.9 194 54.1
Psat5g064560 Pisum sativum HOM05D006843 ORTHO05D008517 8.1e-45 185.3 128 66.4
Psat4g156200 Pisum sativum HOM05D006843 ORTHO05D008517 1.1e-44 184.9 128 66.4
Psat7g029280 Pisum sativum HOM05D006843 ORTHO05D008517 3.1e-44 183.3 128 64.8
Haze_01866 Corylus avellana HOM05D006843 ORTHO05D008517 3.4e-43 179.9 191 53.4
Dinv20052 Davidia involucrata HOM05D002890 ORTHO05D005855 1.8e-36 157.5 145 59.3
Os06g0679700 Oryza sativa ssp. japonica HOM05D006843 ORTHO05D008517 1.2e-35 154.8 162 54.3
CDE02G2447 Ceratophyllum demersum HOM05D006843 ORTHO05D008517 1.3e-29 134.8 243 36.6
Psat3g185160 Pisum sativum HOM05D006843 ORTHO05D008517 7.6e-27 125.6 88 64.8
Psat3g153160 Pisum sativum HOM05D006816 ORTHO05D008517 1.4e-25 121.3 88 63.6
MCO05G180 Micromonas commoda HOM05D006843 ORTHO05D008517 2.4e-20 104.0 235 28.1
Dinv20053 Davidia involucrata HOM05D006843 ORTHO05D008517 8.8e-15 85.5 120 42.5
Psat7g126680 Pisum sativum HOM05D006843 ORTHO05D008517 3.7e-13 80.1 61 65.6
ATR0926G001 Amborella trichopoda HOM05D006843 ORTHO05D008517 3.2e-09 67.0 56 58.9
Cre01.g054650 Chlamydomonas reinhardtii HOM05D006843 ORTHO05D008517 8.8e-07 58.9 96 35.4


User provided reference genes

Program Settings