Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G0469 Cannabis sativa HOM05D006936 ORTHO05D008273 4.9e-88 327.8 168 100.0
Gorai.002G089200 Gossypium raimondii HOM05D006936 ORTHO05D008273 2.5e-52 209.1 187 64.2
Gohir.D01G067300 Gossypium hirsutum HOM05D006936 ORTHO05D008273 7.4e-52 207.6 187 64.2
Thecc.07G035400 Theobroma cacao HOM05D006936 ORTHO05D008273 3.7e-51 205.3 187 60.4
Gohir.A01G080100 Gossypium hirsutum HOM05D006936 ORTHO05D008273 2.4e-50 202.6 185 64.3
ClCG10G005400 Citrullus lanatus HOM05D006936 ORTHO05D008273 4.1e-50 201.8 188 61.7
MD11G1216700 Malus domestica HOM05D006936 ORTHO05D008273 1.2e-49 200.3 188 59.6
Duzib213G0701 Durio zibethinus HOM05D006936 ORTHO05D008273 3.4e-49 198.7 185 61.6
CsaV3_3G005130 Cucumis sativus L. HOM05D006936 ORTHO05D008273 7.7e-49 197.6 188 59.6
Prupe.4G214700 Prunus persica HOM05D006936 ORTHO05D008273 3.8e-48 195.3 188 58.5
Eucgr.F03471 Eucalyptus grandis HOM05D006936 ORTHO05D008273 1.1e-47 193.7 189 57.7
Potri.003G122100 Populus trichocarpa HOM05D006936 ORTHO05D008273 1.1e-47 193.7 188 57.4
Nn1g03514 Nelumbo nucifera HOM05D006936 ORTHO05D008273 4.2e-47 191.8 175 61.7
Cpa.g.sc12.300 Carica papaya HOM05D006936 ORTHO05D008273 7.2e-47 191.0 187 56.1
Haze_09683 Corylus avellana HOM05D006936 ORTHO05D008273 9.4e-47 190.7 190 56.3
Ciclev10009642m.g Citrus clementina HOM05D006936 ORTHO05D008273 6.1e-46 188.0 187 55.6
Hma1.2p1_0738F.1_g211120 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 5.1e-45 184.9 192 56.8
Hma1.2p1_2518F.1_g323766 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 5.1e-45 184.9 192 56.8
GSVIVG01037658001 Vitis vinifera HOM05D006936 ORTHO05D008273 8.8e-45 184.1 188 56.9
CSS0049611 Camellia sinensis var. sinensis HOM05D006936 ORTHO05D008273 2.6e-44 182.6 190 56.3
RcHm_v2.0_Chr5g0040171 Rosa chinensis HOM05D006936 ORTHO05D008273 2.6e-44 182.6 187 54.5
Potri.001G109600 Populus trichocarpa HOM05D006936 ORTHO05D008273 5.7e-44 181.4 189 54.5
CiPaw.11G190300 Carya illinoinensis HOM05D006936 ORTHO05D008273 1.3e-43 180.3 189 55.6
FvH4_3g22870 Fragaria vesca HOM05D006936 ORTHO05D008273 2.2e-43 179.5 188 54.8
FAN11G3489 Fragaria x ananassa HOM05D006936 ORTHO05D008273 2.2e-43 179.5 188 54.8
FAN21G0204 Fragaria x ananassa HOM05D006936 ORTHO05D008273 2.2e-43 179.5 188 54.8
Lj6g0001928 Lotus japonicus HOM05D006936 ORTHO05D008273 4.8e-43 178.3 188 55.9
Glyma.18G095900 Glycine max HOM05D006936 ORTHO05D008273 6.3e-43 177.9 187 54.5
TWI39G1260 Tripterygium wilfordii HOM05D006936 ORTHO05D008273 6.3e-43 177.9 189 55.0
Phvul.006G044500 Phaseolus vulgaris HOM05D006936 ORTHO05D008273 4.1e-42 175.3 188 53.7
Migut.H01824 Erythranthe guttata HOM05D006936 ORTHO05D008273 5.3e-42 174.9 187 54.0
TWI38G2356 Tripterygium wilfordii HOM05D006936 ORTHO05D008273 7.0e-42 174.5 189 54.5
VMungo0540G1312 Vigna mungo HOM05D006936 ORTHO05D008273 7.0e-42 174.5 188 54.3
Manes.03G129900 Manihot esculenta HOM05D006936 ORTHO05D008273 1.2e-41 173.7 188 54.8
PGR031G2182 Punica granatum HOM05D006936 ORTHO05D008273 1.2e-41 173.7 189 53.4
Sp7g24910 Schrenkiella parvula HOM05D006936 ORTHO05D008273 1.6e-41 173.3 190 51.1
TAR624G1327 Trochodendron aralioides HOM05D006936 ORTHO05D008273 2.6e-41 172.6 196 54.6
Ca_19852_v3 Cicer arietinum L. HOM05D006936 ORTHO05D008273 3.5e-41 172.2 188 53.2
Glyma.08G317000 Glycine max HOM05D006936 ORTHO05D008273 5.9e-41 171.4 188 53.7
THA.LOC104813424 Tarenaya hassleriana HOM05D006936 ORTHO05D008273 1.3e-40 170.2 192 52.6
Aqoxy3G01790 Aquilegia oxysepala HOM05D006936 ORTHO05D008273 1.7e-40 169.9 199 51.3
PSO210G5704 Papaver somniferum HOM05D006936 ORTHO05D008273 2.2e-40 169.5 189 51.3
QL08p009960 Quercus lobata HOM05D006936 ORTHO05D008273 2.9e-40 169.1 234 44.9
BcaNung03571 Brassica carinata HOM05D006936 ORTHO05D008273 3.8e-40 168.7 190 48.9
Carub.0007s1390 Capsella rubella HOM05D006936 ORTHO05D008273 3.8e-40 168.7 191 50.8
DCAR_022566 Daucus carota HOM05D006936 ORTHO05D008273 5.0e-40 168.3 191 49.7
PSO832G3825 Papaver somniferum HOM05D006936 ORTHO05D008273 6.5e-40 167.9 188 52.7
BcaC07g38260 Brassica carinata HOM05D006936 ORTHO05D008273 8.5e-40 167.5 190 49.5
AL7G25870 Arabidopsis lyrata HOM05D006936 ORTHO05D008273 1.5e-39 166.8 190 50.0
Psat5g178440 Pisum sativum HOM05D006936 ORTHO05D008273 2.5e-39 166.0 189 51.3
C01p23100 Brassica napus HOM05D006936 ORTHO05D008273 4.2e-39 165.2 190 48.4
Lalb_Chr20g0113821 Lupinus albus HOM05D006936 ORTHO05D008273 4.2e-39 165.2 189 49.2
Medtr3g052260 Medicago truncatula HOM05D006936 ORTHO05D008273 5.5e-39 164.9 189 48.7
TPR.G33779 Trifolium pratense HOM05D006936 ORTHO05D008273 5.5e-39 164.9 189 50.3
C08p10070 Brassica napus HOM05D006936 ORTHO05D008273 7.2e-39 164.5 188 50.5
BolC8t48685H Brassica oleracea HOM05D006936 ORTHO05D008273 7.2e-39 164.5 188 50.5
MSTRG.12976 Avicennia marina HOM05D006936 ORTHO05D008273 9.4e-39 164.1 197 49.7
Cc05_g13850 Coffea canephora HOM05D006936 ORTHO05D008273 1.2e-38 163.7 192 52.1
A01p18140 Brassica napus HOM05D006936 ORTHO05D008273 2.7e-38 162.5 193 47.2
AT4G26965 Arabidopsis thaliana HOM05D006936 ORTHO05D008273 8.0e-38 161.0 190 48.9
BcaB03g12517 Brassica carinata HOM05D006936 ORTHO05D008273 1.0e-37 160.6 190 49.5
BolC1t02244H Brassica oleracea HOM05D006936 ORTHO05D008273 1.4e-37 160.2 204 45.1
BraA01t01769Z Brassica rapa HOM05D006936 ORTHO05D008273 2.3e-37 159.5 201 45.3
HanXRQChr03g0076461 Helianthus annuus HOM05D006936 ORTHO05D008273 2.3e-37 159.5 192 47.9
unitig_8.g4785 Utricularia gibba HOM05D006936 ORTHO05D008273 4.0e-37 158.7 187 50.3
Sopen07g032840 Solanum pennellii HOM05D006936 ORTHO05D008273 5.2e-37 158.3 187 50.8
SGA_v2.0_scaffold8G04322 Striga asiatica HOM05D006936 ORTHO05D008273 8.8e-37 157.5 191 49.7
PGSC0003DMG401022215 Solanum tuberosum HOM05D006936 ORTHO05D008273 1.5e-36 156.8 187 49.7
Solyc07g064640.3 Solanum lycopersicum HOM05D006936 ORTHO05D008273 7.5e-36 154.5 187 48.7
EL10Ac4g07798 Beta vulgaris HOM05D006936 ORTHO05D008273 1.7e-35 153.3 192 49.5
HPP92_004131 Vanilla planifolia HOM05D006936 ORTHO05D008273 2.2e-35 152.9 187 49.2
BraA08t34018Z Brassica rapa HOM05D006936 ORTHO05D008273 2.8e-35 152.5 226 42.0
ECA240G2843 Erigeron canadensis HOM05D006936 ORTHO05D008273 3.7e-35 152.1 176 50.6
Lsat_1_v5_gn_9_93840 Lactuca sativa HOM05D006936 ORTHO05D008273 6.3e-35 151.4 189 47.6
Dinv40761 Davidia involucrata HOM05D006936 ORTHO05D008273 1.4e-34 150.2 136 62.5
Peaxi162Scf00235g00220 Petunia axillaris HOM05D006936 ORTHO05D008273 4.1e-34 148.7 216 44.9
FAN16G3045 Fragaria x ananassa HOM05D006936 ORTHO05D008273 1.2e-33 147.1 210 45.2
arahy.Tifrunner.gnm1.ann1.HAV09U Arachis hypogaea HOM05D006936 ORTHO05D008273 2.0e-33 146.4 149 54.4
arahy.Tifrunner.gnm1.ann1.MX8M57 Arachis hypogaea HOM05D006936 ORTHO05D008273 2.0e-33 146.4 158 52.5
Cfa020336 Carpinus fangiana HOM05D000228 ORTHO05D001122 2.0e-33 146.4 166 51.8
Thhalv10026517m.g Eutrema salsugineum HOM05D006936 ORTHO05D008273 3.5e-33 145.6 139 56.1
Sabra01G0082900 Salix brachista HOM05D006936 ORTHO05D008273 4.5e-33 145.2 146 54.1
Sc16g0005990 Simmondsia chinensis HOM05D006936 ORTHO05D008273 4.5e-33 145.2 193 45.6
Sed0005355 Sechium edule HOM05D006936 ORTHO05D008273 1.0e-32 144.1 132 59.1
Oeu048401.1 Olea europaea HOM05D006936 ORTHO05D008273 2.2e-32 142.9 137 59.9
Rhsim06G0217500 Rhododendron simsii HOM05D000228 ORTHO05D001122 2.2e-32 142.9 171 50.9
A08p20640 Brassica napus HOM05D006936 ORTHO05D008273 1.5e-31 140.2 144 55.6
Aa31LG5G12010 Aethionema arabicum HOM05D006936 ORTHO05D008273 7.2e-31 137.9 170 48.8
Os09g0500200 Oryza sativa ssp. japonica HOM05D006936 ORTHO05D008273 2.1e-30 136.3 189 46.6
Nitab4.5_0007360g0030 Nicotiana tabacum HOM05D006936 ORTHO05D008273 2.7e-30 136.0 138 55.1
Zm00001eb102230 Zea mays HOM05D006936 ORTHO05D008273 2.7e-30 136.0 189 43.9
Hma1.2p1_0738F.1_g211130 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 6.1e-30 134.8 129 59.7
Nitab4.5_0003495g0030 Nicotiana tabacum HOM05D006936 ORTHO05D008273 8.0e-30 134.4 138 55.1
CDE05G0574 Ceratophyllum demersum HOM05D006936 ORTHO05D008273 2.3e-29 132.9 137 56.2
CAN.G337.138 Capsicum annuum HOM05D006936 ORTHO05D008273 5.2e-29 131.7 187 44.9
CARHR234570 Cardamine hirsuta HOM05D006936 ORTHO05D008273 8.3e-27 124.4 144 47.9
MELO3C025377.2 Cucumis melo HOM05D006936 ORTHO05D008273 2.0e-25 119.8 208 41.8
ATR1094G005 Amborella trichopoda HOM05D006936 ORTHO05D008273 1.7e-24 116.7 179 45.3
Atru.chr2.3444 Acer truncatum HOM05D006936 ORTHO05D008273 1.8e-21 106.7 101 56.4
Hma1.2p1_0738F.1_g211140 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 4.0e-21 105.5 126 54.0
Hma1.2p1_2518F.1_g323762 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 4.0e-21 105.5 126 54.0
vmacro02233 Vaccinium macrocarpon HOM05D006936 ORTHO05D008273 1.5e-20 103.6 93 58.1
MBI02_g21871_MAGBIO Magnolia biondii HOM05D006936 ORTHO05D008273 2.6e-20 102.8 129 51.2
Actinidia24797 Actinidia chinensis HOM05D006936 ORTHO05D008273 1.6e-17 93.6 130 49.2
arahy.Tifrunner.gnm1.ann1.XX62UZ Arachis hypogaea HOM05D006936 ORTHO05D008273 3.5e-17 92.4 117 55.6
Sabra18G0079500 Salix brachista HOM05D006936 ORTHO05D008273 3.8e-16 89.0 120 45.8
Hund23239 Selenicereus undatus HOM05D006936 ORTHO05D008273 1.1e-15 87.4 171 36.3
Hma1.2p1_0738F.1_g211110 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 2.5e-15 86.3 74 56.8
Os05g0538900 Oryza sativa ssp. japonica HOM05D006936 ORTHO05D008273 5.6e-15 85.1 88 52.3
AUR62020430 Chenopodium quinoa HOM05D006936 ORTHO05D008273 2.3e-13 79.7 197 31.0
Mapoly0093s0007 Marchantia polymorpha HOM05D006936 ORTHO05D008273 1.2e-12 77.4 201 30.3
Ah.06g185850 Amaranthus hybridus HOM05D006936 ORTHO05D008273 3.4e-12 75.9 119 43.7
Pp3c15_25830 Physcomitrium patens HOM05D006936 ORTHO05D008273 1.1e-10 70.9 173 34.1
SEGI_32271 Sequoiadendron giganteum HOM05D006301 ORTHO05D008273 8.6e-08 61.2 91 38.5
Ah.06g185860 Amaranthus hybridus HOM05D006936 ORTHO05D008273 9.5e-07 57.8 37 64.9
DCAR_000990 Daucus carota HOM05D006936 ORTHO05D008273 3.6e-06 55.8 66 54.5


User provided reference genes

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