Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G0425 Cannabis sativa HOM05D006092 ORTHO05D007508 1.4e-84 316.2 164 100.0
Prupe.6G035200 Prunus persica HOM05D006092 ORTHO05D007508 1.2e-57 226.9 163 74.2
MD03G1042800 Malus domestica HOM05D006092 ORTHO05D007508 4.8e-56 221.5 163 74.2
Cfa016959 Carpinus fangiana HOM05D006092 ORTHO05D007508 2.4e-55 219.2 162 74.1
ClCG10G004510 Citrullus lanatus HOM05D006092 ORTHO05D007508 1.6e-54 216.5 164 73.8
MELO3C014124.2 Cucumis melo HOM05D006092 ORTHO05D007508 2.0e-54 216.1 164 75.6
CsaV3_3G004330 Cucumis sativus L. HOM05D006092 ORTHO05D007508 2.7e-54 215.7 164 75.0
Haze_09914 Corylus avellana HOM05D006092 ORTHO05D007508 5.0e-53 211.5 162 70.4
FAN25G2470 Fragaria x ananassa HOM05D006092 ORTHO05D007508 1.5e-52 209.9 166 71.1
RcHm_v2.0_Chr5g0074661 Rosa chinensis HOM05D006092 ORTHO05D007508 1.5e-52 209.9 164 71.3
Ciclev10009769m.g Citrus clementina HOM05D006092 ORTHO05D007508 1.9e-52 209.5 170 70.6
Lj3g0000125 Lotus japonicus HOM05D006092 ORTHO05D007508 1.9e-52 209.5 163 69.3
THA.LOC104822703 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 7.2e-52 207.6 164 70.1
FvH4_3g41620 Fragaria vesca HOM05D006092 ORTHO05D007508 1.2e-51 206.8 164 70.7
FAN11G0712 Fragaria x ananassa HOM05D006092 ORTHO05D007508 1.2e-51 206.8 164 70.7
Psat5g231800 Pisum sativum HOM05D006092 ORTHO05D007508 2.1e-51 206.1 163 67.5
ECA246G4981 Erigeron canadensis HOM05D006092 ORTHO05D007508 8.0e-51 204.1 150 75.3
Sed0026101 Sechium edule HOM05D006092 ORTHO05D007508 8.0e-51 204.1 165 70.9
Migut.M01583 Erythranthe guttata HOM05D006092 ORTHO05D007508 1.0e-50 203.8 140 77.1
Oeu013004.1 Olea europaea HOM05D006092 ORTHO05D007508 1.0e-50 203.8 146 78.1
THA.LOC104810303 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 1.4e-50 203.4 162 69.8
CARHR087970 Cardamine hirsuta HOM05D006092 ORTHO05D007508 1.8e-50 203.0 165 68.5
Lsat_1_v5_gn_5_381 Lactuca sativa HOM05D006092 ORTHO05D007508 1.8e-50 203.0 139 76.3
HanXRQChr05g0160351 Helianthus annuus HOM05D006092 ORTHO05D007508 2.3e-50 202.6 142 78.9
Manes.01G006400 Manihot esculenta HOM05D006092 ORTHO05D007508 2.3e-50 202.6 132 78.8
TPR.G16714 Trifolium pratense HOM05D006092 ORTHO05D007508 2.3e-50 202.6 166 67.5
Lalb_Chr18g0048631 Lupinus albus HOM05D006092 ORTHO05D007508 3.0e-50 202.2 172 64.5
QL08p000538 Quercus lobata HOM05D006092 ORTHO05D007508 3.0e-50 202.2 166 70.5
Thhalv10011835m.g Eutrema salsugineum HOM05D006092 ORTHO05D007508 4.0e-50 201.8 168 66.7
TWI39G1159 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 4.0e-50 201.8 166 67.5
Atru.chr2.3894 Acer truncatum HOM05D006092 ORTHO05D007508 5.2e-50 201.4 164 68.3
Nn1g07635 Nelumbo nucifera HOM05D006092 ORTHO05D007508 6.8e-50 201.1 149 72.5
TWI38G1372 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 6.8e-50 201.1 169 68.6
Oeu006265.1 Olea europaea HOM05D006092 ORTHO05D007508 8.9e-50 200.7 147 76.2
Cpa.g.sc12.69 Carica papaya HOM05D006092 ORTHO05D007508 1.2e-49 200.3 140 75.0
AL1G63740 Arabidopsis lyrata HOM05D006092 ORTHO05D007508 1.5e-49 199.9 164 67.1
CARHR045350 Cardamine hirsuta HOM05D006092 ORTHO05D007508 2.0e-49 199.5 168 66.1
AT1G55670 Arabidopsis thaliana HOM05D006092 ORTHO05D007508 3.4e-49 198.7 168 66.7
arahy.Tifrunner.gnm1.ann1.4PD0PP Arachis hypogaea HOM05D006092 ORTHO05D007508 3.4e-49 198.7 163 64.4
Nitab4.5_0000611g0110 Nicotiana tabacum HOM05D006092 ORTHO05D007508 4.4e-49 198.4 140 75.7
Nitab4.5_0000611g0120 Nicotiana tabacum HOM05D006092 ORTHO05D007508 4.4e-49 198.4 140 75.7
Rhsim04G0007400 Rhododendron simsii HOM05D006092 ORTHO05D007508 5.7e-49 198.0 142 73.9
HanXRQChr08g0232881 Helianthus annuus HOM05D006092 ORTHO05D007508 7.5e-49 197.6 150 75.3
GSVIVG01014842001 Vitis vinifera HOM05D006092 ORTHO05D007508 1.3e-48 196.8 170 67.6
Aqoxy4G02265 Aquilegia oxysepala HOM05D006092 ORTHO05D007508 1.7e-48 196.4 138 75.4
Lj8P183T26 Lonicera japonica HOM05D006092 ORTHO05D007508 1.7e-48 196.4 103 92.2
SGA_v2.0_scaffold186G40234 Striga asiatica HOM05D006092 ORTHO05D007508 1.7e-48 196.4 142 76.1
Sabra11G0138000 Salix brachista HOM05D006092 ORTHO05D007508 2.2e-48 196.1 134 76.1
SalBow8G3834 Salvia bowleyana HOM05D006092 ORTHO05D007508 2.2e-48 196.1 140 77.9
Potri.011G168700 Populus trichocarpa HOM05D006092 ORTHO05D007508 2.8e-48 195.7 153 69.3
PGR031G3987 Punica granatum HOM05D006092 ORTHO05D007508 2.8e-48 195.7 162 69.1
unitig_37.g11908 Utricularia gibba HOM05D006092 ORTHO05D007508 3.7e-48 195.3 140 73.6
Aa31LG10G560 Aethionema arabicum HOM05D006092 ORTHO05D007508 6.3e-48 194.5 163 66.3
unitig_92.g28271 Utricularia gibba HOM05D006092 ORTHO05D007508 6.3e-48 194.5 103 92.2
BcaB07g33193 Brassica carinata HOM05D006092 ORTHO05D007508 8.3e-48 194.1 146 74.7
CAN.G623.73 Capsicum annuum HOM05D006092 ORTHO05D007508 8.3e-48 194.1 156 71.2
Nitab4.5_0001622g0160 Nicotiana tabacum HOM05D006092 ORTHO05D007508 8.3e-48 194.1 137 74.5
PSO063G2976 Papaver somniferum HOM05D006092 ORTHO05D007508 8.3e-48 194.1 166 67.5
PSO782G4285 Papaver somniferum HOM05D006092 ORTHO05D007508 8.3e-48 194.1 166 67.5
EL10Ac3g07451 Beta vulgaris HOM05D006092 ORTHO05D007508 1.1e-47 193.7 162 66.0
MBI15_g47073_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 1.1e-47 193.7 144 72.9
Sc07g0002210 Simmondsia chinensis HOM05D006092 ORTHO05D007508 1.1e-47 193.7 159 66.0
Thecc.07G001800 Theobroma cacao HOM05D006092 ORTHO05D007508 1.4e-47 193.4 164 67.1
CDE05G1532 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 1.8e-47 193.0 143 69.2
Carub.0001s4419 Capsella rubella HOM05D006092 ORTHO05D007508 2.4e-47 192.6 165 66.7
Gorai.009G454900 Gossypium raimondii HOM05D006092 ORTHO05D007508 2.4e-47 192.6 163 68.1
Gohir.A04G001100 Gossypium hirsutum HOM05D006092 ORTHO05D007508 3.1e-47 192.2 163 68.1
Potri.001G471900 Populus trichocarpa HOM05D006092 ORTHO05D007508 3.1e-47 192.2 134 73.9
Sabra16G0320400 Salix brachista HOM05D006092 ORTHO05D007508 3.1e-47 192.2 135 74.8
Sopen07g034330 Solanum pennellii HOM05D006092 ORTHO05D007508 3.1e-47 192.2 140 75.0
VMungo1080G0991 Vigna mungo HOM05D006092 ORTHO05D007508 3.1e-47 192.2 166 66.3
BcaB04g16937 Brassica carinata HOM05D006092 ORTHO05D007508 4.1e-47 191.8 146 73.3
PGSC0003DMG400022249 Solanum tuberosum HOM05D006092 ORTHO05D007508 4.1e-47 191.8 140 74.3
Phvul.005G004000 Phaseolus vulgaris HOM05D006092 ORTHO05D007508 5.4e-47 191.4 165 66.1
Solyc07g066150.1 Solanum lycopersicum HOM05D006092 ORTHO05D007508 5.4e-47 191.4 140 75.0
HPP92_022812 Vanilla planifolia HOM05D006092 ORTHO05D007508 5.4e-47 191.4 144 68.1
ATR0751G135 Amborella trichopoda HOM05D006092 ORTHO05D007508 7.0e-47 191.0 144 72.2
Glyma.06G321900 Glycine max HOM05D006092 ORTHO05D007508 7.0e-47 191.0 162 64.8
MBI15_g47946_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 7.0e-47 191.0 144 72.2
Eucgr.F03646 Eucalyptus grandis HOM05D006092 ORTHO05D007508 9.2e-47 190.7 172 66.3
A08p00380 Brassica napus HOM05D006092 ORTHO05D007508 1.2e-46 190.3 169 64.5
BraA08t32097Z Brassica rapa HOM05D006092 ORTHO05D007508 1.2e-46 190.3 169 64.5
C06p16180 Brassica napus HOM05D006092 ORTHO05D007508 2.7e-46 189.1 165 64.8
COL.COLO4_07787 Corchorus olitorius HOM05D006092 ORTHO05D007508 2.7e-46 189.1 102 91.2
Ah.04g149440 Amaranthus hybridus HOM05D006092 ORTHO05D007508 3.5e-46 188.7 135 76.3
BcaB02g10807 Brassica carinata HOM05D006092 ORTHO05D007508 3.5e-46 188.7 166 65.1
A06p00060 Brassica napus HOM05D006092 ORTHO05D007508 3.5e-46 188.7 168 64.9
BraA06t23221Z Brassica rapa HOM05D006092 ORTHO05D007508 3.5e-46 188.7 168 64.9
Glyma.04G112800 Glycine max HOM05D006092 ORTHO05D007508 3.5e-46 188.7 172 61.6
BcaC08g43644 Brassica carinata HOM05D006092 ORTHO05D007508 4.5e-46 188.3 168 64.3
C06p10630 Brassica napus HOM05D006092 ORTHO05D007508 4.5e-46 188.3 168 64.3
BolC6t36143H Brassica oleracea HOM05D006092 ORTHO05D007508 4.5e-46 188.3 168 64.3
CDE11G0224 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 4.5e-46 188.3 167 62.3
BcaC08g44210 Brassica carinata HOM05D006092 ORTHO05D007508 5.9e-46 188.0 165 64.2
A05p17350 Brassica napus HOM05D006092 ORTHO05D007508 5.9e-46 188.0 164 64.6
BolC6t36815H Brassica oleracea HOM05D006092 ORTHO05D007508 5.9e-46 188.0 165 64.2
BraA05t20631Z Brassica rapa HOM05D006092 ORTHO05D007508 5.9e-46 188.0 164 64.6
Gohir.A13G128600 Gossypium hirsutum HOM05D006092 ORTHO05D007508 7.8e-46 187.6 160 66.9
Sed0012341 Sechium edule HOM05D006092 ORTHO05D007508 7.8e-46 187.6 167 65.9
C03p93010 Brassica napus HOM05D006092 ORTHO05D007508 1.0e-45 187.2 168 64.3
BcaC01g01548 Brassica carinata HOM05D006092 ORTHO05D007508 1.3e-45 186.8 164 65.2
BolC3t21605H Brassica oleracea HOM05D006092 ORTHO05D007508 1.3e-45 186.8 164 65.2
Gohir.D13G132000 Gossypium hirsutum HOM05D006092 ORTHO05D007508 1.3e-45 186.8 160 66.2
Gorai.013G148000 Gossypium raimondii HOM05D006092 ORTHO05D007508 1.7e-45 186.4 160 66.2
AUR62020866 Chenopodium quinoa HOM05D006092 ORTHO05D007508 2.3e-45 186.0 108 87.0
AUR62018553 Chenopodium quinoa HOM05D006092 ORTHO05D007508 3.8e-45 185.3 99 91.9
SEGI_13197 Sequoiadendron giganteum HOM05D006092 ORTHO05D007508 4.3e-44 181.8 144 66.7
Medtr3g010000 Medicago truncatula HOM05D006092 ORTHO05D007508 6.1e-43 177.9 165 62.4
Os09g0481200 Oryza sativa ssp. japonica HOM05D006092 ORTHO05D007508 8.0e-43 177.6 139 65.5
Zm00001eb316290 Zea mays HOM05D006092 ORTHO05D007508 1.0e-42 177.2 140 67.1
MBI14_g12737_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 4.0e-42 175.3 117 76.9
Zm00001eb101660 Zea mays HOM05D006092 ORTHO05D007508 2.9e-40 169.1 140 63.6
Nitab4.5_0000611g0130 Nicotiana tabacum HOM05D006092 ORTHO05D007508 1.6e-38 163.3 97 84.5
Dinv40914 Davidia involucrata HOM05D006092 ORTHO05D007508 1.3e-37 160.2 81 96.3
Pp3c9_15440 Physcomitrium patens HOM05D006092 ORTHO05D007508 3.3e-36 155.6 149 50.3
SMO353G0046 Selaginella moellendorffii HOM05D006092 ORTHO05D007508 1.2e-35 153.7 109 65.1
CiPaw.11G210500 Carya illinoinensis HOM05D006092 ORTHO05D007508 1.8e-34 149.8 165 57.0
AagrBONN_evm.TU.Sc2ySwM_228.5128 Anthoceros agrestis HOM05D006092 ORTHO05D007508 1.2e-33 147.1 115 64.3
Pp3c15_5850 Physcomitrium patens HOM05D006092 ORTHO05D007508 2.9e-32 142.5 136 54.4
Mapoly0038s0054 Marchantia polymorpha HOM05D006092 ORTHO05D007508 1.1e-31 140.6 136 52.9
CBR_g28070 Chara braunii HOM05D006092 ORTHO05D007508 5.4e-31 138.3 161 46.6
Sp1g41280 Schrenkiella parvula HOM05D006092 ORTHO05D007508 1.2e-27 127.1 167 49.1
TAR627G0509 Trochodendron aralioides HOM05D006092 ORTHO05D007508 1.2e-27 127.1 72 83.3
PRCOL_00006984 Prasinoderma coloniale HOM05D006092 ORTHO05D007508 1.9e-20 103.2 90 54.4
MCO01G478 Micromonas commoda HOM05D006092 ORTHO05D007508 4.4e-17 92.0 94 50.0
PGSC0003DMG400006702 Solanum tuberosum HOM05D006092 ORTHO05D007508 1.3e-16 90.5 67 67.2
EL10As5g23536 Beta vulgaris HOM05D006092 ORTHO05D007508 1.9e-15 86.7 50 86.0
EL10Ac3g06625 Beta vulgaris HOM05D006092 ORTHO05D007508 4.2e-15 85.5 48 87.5
EL10Ac5g10941 Beta vulgaris HOM05D006092 ORTHO05D007508 4.2e-15 85.5 48 87.5
Cre12.g560950 Chlamydomonas reinhardtii HOM05D006092 ORTHO05D007508 4.3e-12 75.5 125 36.8


User provided reference genes

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