Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G0421 Cannabis sativa HOM05D002831 ORTHO05D004341 4.3e-97 358.2 215 100.0
Prupe.2G300400 Prunus persica HOM05D002831 ORTHO05D004341 7.2e-68 261.2 215 76.7
FAN03G0781 Fragaria x ananassa HOM05D002831 ORTHO05D004341 3.7e-64 248.8 215 77.2
FvH4_7g30190 Fragaria vesca HOM05D002831 ORTHO05D004341 1.4e-63 246.9 215 77.2
FAN01G0089 Fragaria x ananassa HOM05D002831 ORTHO05D004341 1.4e-63 246.9 215 76.7
FAN06G3328 Fragaria x ananassa HOM05D002831 ORTHO05D004341 1.4e-63 246.9 215 77.2
FAN03G0359 Fragaria x ananassa HOM05D002831 ORTHO05D004341 3.1e-63 245.7 215 76.7
FAN10G3196 Fragaria x ananassa HOM05D002831 ORTHO05D004341 9.2e-63 244.2 215 76.7
MD07G1278500 Malus domestica HOM05D002831 ORTHO05D004341 3.5e-62 242.3 216 75.9
Cfa016283 Carpinus fangiana HOM05D002831 ORTHO05D004341 3.8e-61 238.8 211 74.4
CiPaw.06G003300 Carya illinoinensis HOM05D002831 ORTHO05D004341 1.2e-59 233.8 213 74.6
RcHm_v2.0_Chr1g0378241 Rosa chinensis HOM05D002831 ORTHO05D004341 4.7e-59 231.9 203 76.8
MD01G1207900 Malus domestica HOM05D002831 ORTHO05D004341 4.0e-58 228.8 216 74.5
QL09p012962 Quercus lobata HOM05D002831 ORTHO05D004341 4.4e-57 225.3 213 73.2
CiPaw.06G003100 Carya illinoinensis HOM05D002831 ORTHO05D004341 5.7e-57 224.9 213 73.2
Thecc.03G183700 Theobroma cacao HOM05D002831 ORTHO05D004341 4.9e-56 221.9 213 63.4
Atru.chr1.379 Acer truncatum HOM05D002831 ORTHO05D004341 7.0e-55 218.0 213 60.6
Atru.ctg97_1.16 Acer truncatum HOM05D002831 ORTHO05D004341 7.0e-55 218.0 213 60.6
Dinv28390 Davidia involucrata HOM05D002831 ORTHO05D004341 7.8e-54 214.5 208 61.1
COL.COLO4_10060 Corchorus olitorius HOM05D002831 ORTHO05D004341 1.7e-53 213.4 214 60.7
Ciclev10005857m.g Citrus clementina HOM05D002831 ORTHO05D004341 3.0e-53 212.6 213 58.2
Cpa.g.sc107.104 Carica papaya HOM05D002831 ORTHO05D004341 5.0e-53 211.8 213 59.2
Manes.14G023000 Manihot esculenta HOM05D002831 ORTHO05D004341 1.1e-52 210.7 215 67.9
Duzib084G1013 Durio zibethinus HOM05D002831 ORTHO05D004341 7.3e-52 208.0 213 59.6
FAN10G0429 Fragaria x ananassa HOM05D002831 ORTHO05D004341 8.0e-51 204.5 215 68.4
Duzib068G1050 Durio zibethinus HOM05D002831 ORTHO05D004341 1.0e-50 204.1 213 59.6
Dinv35249 Davidia involucrata HOM05D002831 ORTHO05D004341 6.8e-50 201.4 200 60.5
Manes.06G152100 Manihot esculenta HOM05D002831 ORTHO05D004341 8.9e-50 201.1 212 66.0
TWI23G0387 Tripterygium wilfordii HOM05D002831 ORTHO05D004341 2.0e-49 199.9 213 52.1
TAR374G0609 Trochodendron aralioides HOM05D002831 ORTHO05D004341 2.0e-49 199.9 212 59.4
Haze_00039 Corylus avellana HOM05D002831 ORTHO05D004341 2.6e-49 199.5 145 68.3
Potri.004G079900 Populus trichocarpa HOM05D002831 ORTHO05D004341 7.5e-49 198.0 213 56.3
Duzib205G1365 Durio zibethinus HOM05D002831 ORTHO05D004341 1.3e-48 197.2 212 59.9
CiPaw.12G018300 Carya illinoinensis HOM05D002831 ORTHO05D004341 6.4e-48 194.9 148 68.2
Potri.017G143215 Populus trichocarpa HOM05D002831 ORTHO05D004341 1.9e-47 193.4 215 56.7
GSVIVG01028866001 Vitis vinifera HOM05D002831 ORTHO05D010484 3.2e-47 192.6 213 68.1
TAR375G0840 Trochodendron aralioides HOM05D002831 ORTHO05D004341 2.0e-46 189.9 213 68.1
Sabra04G0053100 Salix brachista HOM05D002831 ORTHO05D004341 2.3e-45 186.4 213 53.1
Eucgr.A02748 Eucalyptus grandis HOM05D002831 ORTHO05D004341 3.0e-45 186.0 214 53.3
Phvul.004G109000 Phaseolus vulgaris HOM05D002831 ORTHO05D004341 5.0e-45 185.3 207 63.8
Glyma.16G179300 Glycine max HOM05D002831 ORTHO05D004341 3.3e-44 182.6 207 63.3
Lj1P1004T73 Lonicera japonica HOM05D002831 ORTHO05D004341 5.6e-44 181.8 207 51.7
Actinidia34155 Actinidia chinensis HOM05D002831 ORTHO05D004341 7.3e-44 181.4 206 57.8
Gorai.006G199200 Gossypium raimondii HOM05D002831 ORTHO05D004341 1.2e-43 180.6 216 54.6
arahy.Tifrunner.gnm1.ann1.VWVY78 Arachis hypogaea HOM05D002831 ORTHO05D010484 1.6e-43 180.3 208 63.0
Gohir.D09G177200 Gossypium hirsutum HOM05D002831 ORTHO05D004341 2.1e-43 179.9 216 55.1
VMungo0464G0591 Vigna mungo HOM05D002831 ORTHO05D004341 2.8e-43 179.5 207 62.3
Sabra17G0120100 Salix brachista HOM05D002831 ORTHO05D004341 6.2e-43 178.3 213 53.5
PGR042G3073 Punica granatum HOM05D002831 ORTHO05D004341 2.3e-42 176.4 213 54.5
Cc02_g02420 Coffea canephora HOM05D002831 ORTHO05D004341 6.8e-42 174.9 206 53.9
Gohir.D12G256900 Gossypium hirsutum HOM05D002831 ORTHO05D004341 4.4e-41 172.2 214 53.7
Gorai.008G275100 Gossypium raimondii HOM05D002831 ORTHO05D004341 4.4e-41 172.2 214 53.7
Actinidia08576 Actinidia chinensis HOM05D002831 ORTHO05D004341 7.5e-41 171.4 206 56.3
Gohir.A12G255500 Gossypium hirsutum HOM05D002831 ORTHO05D004341 7.5e-41 171.4 214 53.3
Gohir.A09G182600 Gossypium hirsutum HOM05D002831 ORTHO05D004341 1.3e-40 170.6 213 54.0
DCAR_020268 Daucus carota HOM05D002831 ORTHO05D004341 2.2e-40 169.9 206 47.1
TWI14G0525 Tripterygium wilfordii HOM05D002831 ORTHO05D004341 2.9e-40 169.5 215 50.7
CSS0004722 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D004341 4.9e-40 168.7 208 49.0
CSS0021117 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D004341 4.9e-40 168.7 208 49.0
Hma1.2p1_0274F.1_g110180 Hydrangea macrophylla HOM05D002831 ORTHO05D004341 6.4e-40 168.3 212 58.0
Peaxi162Scf00444g00016 Petunia axillaris HOM05D002831 ORTHO05D004341 3.2e-39 166.0 212 55.2
DCAR_009393 Daucus carota HOM05D002831 ORTHO05D004341 9.2e-39 164.5 208 50.5
CSS0012099 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D004341 1.2e-38 164.1 208 50.0
CSS0034926 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D004341 1.2e-38 164.1 208 50.0
PGSC0003DMG400028898 Solanum tuberosum HOM05D002831 ORTHO05D004341 2.7e-38 162.9 208 51.0
Peaxi162Scf00618g00748 Petunia axillaris HOM05D001680 ORTHO05D004341 6.0e-38 161.8 211 52.1
Glyma.09G132500 Glycine max HOM05D002831 ORTHO05D004341 7.8e-38 161.4 208 54.3
Oeu036905.1 Olea europaea HOM05D002831 ORTHO05D004341 7.8e-38 161.4 213 51.2
Rhsim03G0190700 Rhododendron simsii HOM05D002831 ORTHO05D004341 1.0e-37 161.0 197 53.8
Nitab4.5_0003825g0080 Nicotiana tabacum HOM05D002831 ORTHO05D004341 2.3e-37 159.8 212 52.8
Sopen06g012030 Solanum pennellii HOM05D002831 ORTHO05D004341 2.3e-37 159.8 208 50.5
CsaV3_3G017430 Cucumis sativus L. HOM05D002831 ORTHO05D004341 3.0e-37 159.5 207 63.8
Lalb_Chr03g0034811 Lupinus albus HOM05D002831 ORTHO05D004341 3.0e-37 159.5 207 61.4
Hma1.2p1_0327F.1_g126410 Hydrangea macrophylla HOM05D002831 ORTHO05D004341 3.9e-37 159.1 209 58.4
Nitab4.5_0000084g0400 Nicotiana tabacum HOM05D002831 ORTHO05D004341 8.6e-37 157.9 210 51.0
TWI39G0102 Tripterygium wilfordii HOM05D002831 ORTHO05D004341 1.1e-36 157.5 214 46.7
vmacro06629 Vaccinium macrocarpon HOM05D002831 ORTHO05D004341 1.1e-36 157.5 197 53.8
Nitab4.5_0000572g0140 Nicotiana tabacum HOM05D002831 ORTHO05D004341 1.9e-36 156.8 210 50.5
MELO3C006940.2 Cucumis melo HOM05D002831 ORTHO05D004341 2.5e-36 156.4 207 62.8
Oeu060465.1 Olea europaea HOM05D002831 ORTHO05D004341 2.5e-36 156.4 200 47.5
ClCG05G008340 Citrullus lanatus HOM05D002831 ORTHO05D004341 3.3e-36 156.0 207 62.8
Lj5g0008853 Lotus japonicus HOM05D002831 ORTHO05D004341 1.2e-35 154.1 209 58.9
Aqoxy7G00243 Aquilegia oxysepala HOM05D002831 ORTHO05D004341 2.1e-35 153.3 215 49.3
SalBow4G1512 Salvia bowleyana HOM05D002831 ORTHO05D004341 2.8e-35 152.9 207 51.2
Rhsim09G0200400 Rhododendron simsii HOM05D002831 ORTHO05D004341 3.6e-35 152.5 201 52.7
Gohir.A11G011900 Gossypium hirsutum HOM05D002831 ORTHO05D004341 1.4e-34 150.6 214 51.9
Sopen03g003930 Solanum pennellii HOM05D002831 ORTHO05D004341 1.8e-34 150.2 207 51.7
Gorai.004G117400 Gossypium raimondii HOM05D002831 ORTHO05D004341 2.3e-34 149.8 201 54.2
Gorai.007G012600 Gossypium raimondii HOM05D002831 ORTHO05D004341 2.3e-34 149.8 214 51.4
Glyma.10G231300 Glycine max HOM05D002831 ORTHO05D004341 6.8e-34 148.3 207 58.0
Gohir.A08G098200 Gossypium hirsutum HOM05D002831 ORTHO05D004341 8.9e-34 147.9 201 53.7
Lalb_Chr02g0141231 Lupinus albus HOM05D002831 ORTHO05D004341 1.2e-33 147.5 208 51.9
Gohir.D11G011100 Gossypium hirsutum HOM05D002831 ORTHO05D004341 1.5e-33 147.1 214 50.5
PGSC0003DMG400010167 Solanum tuberosum HOM05D002831 ORTHO05D004341 2.0e-33 146.7 198 52.0
CAN.G126.12 Capsicum annuum HOM05D002831 ORTHO05D004341 4.4e-33 145.6 212 49.5
Sed0011382 Sechium edule HOM05D002831 ORTHO05D004341 7.6e-33 144.8 207 60.4
Gohir.D08G109800 Gossypium hirsutum HOM05D002831 ORTHO05D004341 1.7e-32 143.7 201 53.2
Solyc06g036250.2 Solanum lycopersicum HOM05D002831 ORTHO05D004341 2.2e-32 143.3 148 50.0
Lalb_Chr06g0161301 Lupinus albus HOM05D002831 ORTHO05D004341 2.9e-32 142.9 207 60.4
Oeu045362.1 Olea europaea HOM05D002831 ORTHO05D004341 2.9e-32 142.9 212 47.2
THA.LOC104800271 Tarenaya hassleriana HOM05D002831 ORTHO05D004341 2.9e-32 142.9 195 44.6
Actinidia31838 Actinidia chinensis HOM05D002831 ORTHO05D004341 6.4e-32 141.7 211 49.8
Glyma.20G162500 Glycine max HOM05D002831 ORTHO05D004341 2.4e-31 139.8 207 55.6
Sed0001656 Sechium edule HOM05D002831 ORTHO05D004341 2.4e-31 139.8 206 61.7
Ca_10728_v3 Cicer arietinum L. HOM05D002831 ORTHO05D004341 4.1e-31 139.0 210 57.1
Nitab4.5_0000248g0010 Nicotiana tabacum HOM05D002831 ORTHO05D004341 1.2e-30 137.5 150 52.0
PSO478G4817 Papaver somniferum HOM05D002831 ORTHO05D004341 2.1e-30 136.7 213 43.2
Sp7g23710 Schrenkiella parvula HOM05D002831 ORTHO05D004341 1.3e-29 134.0 213 41.8
PSO782G2858 Papaver somniferum HOM05D002831 ORTHO05D004341 3.0e-29 132.9 214 43.5
MSTRG.27090 Avicennia marina HOM05D002831 ORTHO05D004341 5.1e-29 132.1 206 51.5
TPR.G7753 Trifolium pratense HOM05D002831 ORTHO05D004341 5.1e-29 132.1 210 52.9
EL10Ac3g05428 Beta vulgaris HOM05D002831 ORTHO05D004341 6.6e-29 131.7 198 47.5
Psat6g196360 Pisum sativum HOM05D002831 ORTHO05D004341 1.5e-28 130.6 210 55.7
AL7G27410 Arabidopsis lyrata HOM05D002831 ORTHO05D004341 4.3e-28 129.0 213 41.3
AT4G25670 Arabidopsis thaliana HOM05D002831 ORTHO05D004341 9.6e-28 127.9 213 40.8
AUR62021127 Chenopodium quinoa HOM05D002831 ORTHO05D004341 1.6e-27 127.1 197 41.1
Carub.0007s1530 Capsella rubella HOM05D002831 ORTHO05D004341 4.7e-27 125.6 213 40.8
MBI11_g04751_MAGBIO Magnolia biondii HOM05D002831 ORTHO05D004341 8.1e-27 124.8 222 53.2
CARHR233110 Cardamine hirsuta HOM05D002831 ORTHO05D004341 1.1e-26 124.4 214 40.7
MSTRG.8713 Avicennia marina HOM05D002831 ORTHO05D004341 1.4e-26 124.0 203 55.7
AUR62031417 Chenopodium quinoa HOM05D002831 ORTHO05D004341 1.4e-26 124.0 197 40.1
Thhalv10027473m.g Eutrema salsugineum HOM05D002831 ORTHO05D004341 1.8e-26 123.6 213 39.9
VMungo0720G1018 Vigna mungo HOM05D002831 ORTHO05D004341 2.4e-26 123.2 208 54.8
BraA01t01645Z Brassica rapa HOM05D002831 ORTHO05D004341 5.2e-26 122.1 214 41.1
MSTRG.74 Avicennia marina HOM05D002831 ORTHO05D004341 1.5e-25 120.6 208 43.8
AL7G27390 Arabidopsis lyrata HOM05D002831 ORTHO05D004341 4.4e-25 119.0 214 40.2
BolC1t02046H Brassica oleracea HOM05D002831 ORTHO05D004341 6.4e-24 115.2 215 40.0
AT4G25690 Arabidopsis thaliana HOM05D002831 ORTHO05D004341 1.4e-23 114.0 212 39.6
Ah.07g206590 Amaranthus hybridus HOM05D002831 ORTHO05D004341 1.9e-23 113.6 201 39.3
THA.LOC104811959 Tarenaya hassleriana HOM05D002831 ORTHO05D004341 1.9e-23 113.6 267 34.5
A01p16930 Brassica napus HOM05D002831 ORTHO05D004341 4.2e-23 112.5 197 41.1
ATR0661G020 Amborella trichopoda HOM05D002831 ORTHO05D004341 7.1e-23 111.7 229 38.0
Sabra06G0007800 Salix brachista HOM05D002831 ORTHO05D010484 7.1e-23 111.7 129 46.5
BNapus_Darmor_BZH_scaffold_232p00070 Brassica napus HOM05D002831 ORTHO05D004341 1.6e-22 110.5 201 38.3
BraA02t06237Z Brassica rapa HOM05D002831 ORTHO05D004341 3.5e-22 109.4 199 37.7
Carub.0008s1268 Capsella rubella HOM05D002831 ORTHO05D004341 4.6e-22 109.0 198 39.9
TPR.G21560 Trifolium pratense HOM05D002831 ORTHO05D004341 1.3e-21 107.5 208 48.6
Aa31LG3G8920 Aethionema arabicum HOM05D002831 ORTHO05D004341 1.7e-21 107.1 206 36.9
BcaC06g32789 Brassica carinata HOM05D002831 ORTHO05D004341 1.7e-21 107.1 217 38.7
C01p21210 Brassica napus HOM05D002831 ORTHO05D004341 1.7e-21 107.1 197 40.6
CAN.G204.16 Capsicum annuum HOM05D002831 ORTHO05D004341 1.7e-21 107.1 197 44.2
A02p11720 Brassica napus HOM05D002831 ORTHO05D004341 3.0e-21 106.3 199 38.7
Sp7g23730 Schrenkiella parvula HOM05D002831 ORTHO05D004341 3.0e-21 106.3 214 40.2
AL8G27020 Arabidopsis lyrata HOM05D002831 ORTHO05D004341 5.1e-21 105.5 199 39.2
vmacro09817 Vaccinium macrocarpon HOM05D002831 ORTHO05D004341 8.7e-21 104.8 139 54.7
Ah.13g069150 Amaranthus hybridus HOM05D002831 ORTHO05D004341 1.1e-20 104.4 198 38.9
Migut.F00296 Erythranthe guttata HOM05D002831 ORTHO05D004341 1.1e-20 104.4 208 43.8
BraA01t01648Z Brassica rapa HOM05D002831 ORTHO05D004341 2.5e-20 103.2 215 38.1
AT5G52550 Arabidopsis thaliana HOM05D002831 ORTHO05D004341 4.3e-20 102.4 199 38.2
BolC1t02049H Brassica oleracea HOM05D002831 ORTHO05D004341 4.3e-20 102.4 215 43.7
unitig_37.g11969 Utricularia gibba HOM05D002831 ORTHO05D004341 5.6e-20 102.1 194 42.8
Thhalv10026278m.g Eutrema salsugineum HOM05D002831 ORTHO05D004341 7.3e-20 101.7 206 36.4
Lalb_Chr21g0305221 Lupinus albus HOM05D002831 ORTHO05D004341 1.3e-19 100.9 173 53.8
SGA_v2.0_scaffold113G31691 Striga asiatica HOM05D002831 ORTHO05D008967 2.1e-19 100.1 208 44.7
CARHR233150 Cardamine hirsuta HOM05D002831 ORTHO05D004341 8.1e-19 98.2 214 37.9
Nn1g08525 Nelumbo nucifera HOM05D002831 ORTHO05D004341 8.1e-19 98.2 106 50.0
Medtr1g100090 Medicago truncatula HOM05D002831 ORTHO05D004341 1.1e-18 97.8 131 66.4
BcaNung07307 Brassica carinata HOM05D002831 ORTHO05D004341 6.9e-18 95.1 214 35.0
Sc19g0001290 Simmondsia chinensis HOM05D002831 ORTHO05D004341 6.9e-18 95.1 198 40.9
HPP92_022210 Vanilla planifolia HOM05D002831 ORTHO05D004341 6.9e-18 95.1 201 37.8
HPP92_022228 Vanilla planifolia HOM05D002831 ORTHO05D004341 6.9e-18 95.1 201 37.8
Os02g0104200 Oryza sativa ssp. japonica HOM05D002831 ORTHO05D004341 2.0e-17 93.6 208 50.0
Zm00001eb229390 Zea mays HOM05D002831 ORTHO05D004341 3.4e-17 92.8 211 52.1
HanXRQChr14g0462531 Helianthus annuus HOM05D002831 ORTHO05D004341 7.6e-17 91.7 219 50.7
BcaB05g21966 Brassica carinata HOM05D002831 ORTHO05D004341 3.8e-16 89.4 197 39.6
BcaC03g14518 Brassica carinata HOM05D002831 ORTHO05D004341 2.4e-15 86.7 108 43.5
Lsat_1_v5_gn_2_131301 Lactuca sativa HOM05D002831 ORTHO05D004341 2.4e-15 86.7 207 53.1
ECA232G1618 Erigeron canadensis HOM05D002831 ORTHO05D004341 4.2e-15 85.9 219 45.7
Migut.F01087 Erythranthe guttata HOM05D002831 ORTHO05D004341 4.2e-15 85.9 195 40.0
SGA_v2.0_scaffold60G21104 Striga asiatica HOM05D002831 ORTHO05D004341 4.2e-15 85.9 208 42.3
unitig_0.g2470 Utricularia gibba HOM05D002831 ORTHO05D004341 5.4e-15 85.5 205 32.7
SGA_v2.0_scaffold10G05296 Striga asiatica HOM05D002831 ORTHO05D004341 4.3e-12 75.9 208 32.7
ECA238G2131 Erigeron canadensis HOM05D002831 ORTHO05D004341 1.3e-11 74.3 210 50.0
SEGI_15574 Sequoiadendron giganteum HOM05D002831 ORTHO05D004341 1.3e-11 74.3 235 34.9
HPP92_022231 Vanilla planifolia HOM05D002831 ORTHO05D004341 2.8e-11 73.2 114 41.2
Os06g0106900 Oryza sativa ssp. japonica HOM05D002831 ORTHO05D004341 3.6e-11 72.8 163 54.0
BraA03t14689Z Brassica rapa HOM05D000048 ORTHO05D000445 3.1e-10 69.7 103 54.4
C07p54490 Brassica napus HOM05D000048 ORTHO05D000445 9.0e-10 68.2 105 42.9
BolC7t45934H Brassica oleracea HOM05D000048 ORTHO05D000445 9.0e-10 68.2 105 42.9
HPP92_008924 Vanilla planifolia HOM05D002831 ORTHO05D004341 9.0e-10 68.2 201 33.3
VMungo0251G0932 Vigna mungo HOM05D002831 ORTHO05D004341 5.8e-09 65.5 120 34.2
CARHR265540 Cardamine hirsuta HOM05D002831 ORTHO05D004341 4.2e-07 59.3 84 42.9


User provided reference genes

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