Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G0316 Cannabis sativa HOM05D006321 ORTHO05D007929 7.6e-94 347.1 162 100.0
TWI60G1509 Tripterygium wilfordii HOM05D006321 ORTHO05D007929 1.4e-76 289.7 162 80.9
Prupe.1G076700 Prunus persica HOM05D006321 ORTHO05D007929 1.9e-76 289.3 162 79.6
Dinv25432 Davidia involucrata HOM05D006321 ORTHO05D007929 1.2e-75 286.6 162 80.9
RcHm_v2.0_Chr4g0399821 Rosa chinensis HOM05D006321 ORTHO05D007929 1.6e-75 286.2 162 80.2
Glyma.01G110600 Glycine max HOM05D006321 ORTHO05D007929 2.7e-75 285.4 162 80.2
TAR622G0244 Trochodendron aralioides HOM05D006321 ORTHO05D007929 2.7e-75 285.4 162 80.9
QL02p047686 Quercus lobata HOM05D006321 ORTHO05D007929 1.7e-74 282.7 161 78.3
Rhsim01G0118600 Rhododendron simsii HOM05D006321 ORTHO05D007929 1.7e-74 282.7 162 78.4
Aqoxy3G01064 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 5.1e-74 281.2 162 75.9
FvH4_4g07380 Fragaria vesca HOM05D006321 ORTHO05D007929 6.6e-74 280.8 158 80.4
FAN12G2844 Fragaria x ananassa HOM05D006321 ORTHO05D007929 6.6e-74 280.8 158 80.4
FAN22G1279 Fragaria x ananassa HOM05D006321 ORTHO05D007929 6.6e-74 280.8 158 80.4
VMungo0540G0928 Vigna mungo HOM05D006321 ORTHO05D007929 8.7e-74 280.4 162 80.2
CSS0046955 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 1.5e-73 279.6 159 79.2
Glyma.03G076300 Glycine max HOM05D006321 ORTHO05D007929 1.5e-73 279.6 162 77.8
THA.LOC104817778 Tarenaya hassleriana HOM05D006321 ORTHO05D007929 1.5e-73 279.6 162 76.5
CiPaw.08G033200 Carya illinoinensis HOM05D006321 ORTHO05D007929 1.9e-73 279.3 162 79.0
Atru.chr7.791 Acer truncatum HOM05D006321 ORTHO05D007929 4.3e-73 278.1 162 79.0
arahy.Tifrunner.gnm1.ann1.CI6UTV Arachis hypogaea HOM05D006321 ORTHO05D007929 4.3e-73 278.1 158 81.0
Cc06_g21570 Coffea canephora HOM05D006321 ORTHO05D007929 7.4e-73 277.3 162 77.2
Ca_14974_v3 Cicer arietinum L. HOM05D006321 ORTHO05D007929 9.6e-73 276.9 162 79.0
CSS0019729 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 1.3e-72 276.6 159 79.2
Duzib251G0486 Durio zibethinus HOM05D006321 ORTHO05D007929 1.6e-72 276.2 162 77.2
Phvul.006G013600 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 1.6e-72 276.2 162 79.6
Ciclev10008911m.g Citrus clementina HOM05D006321 ORTHO05D007929 2.8e-72 275.4 161 77.6
COL.COLO4_27457 Corchorus olitorius HOM05D006321 ORTHO05D007929 2.8e-72 275.4 162 77.8
CSS0021189 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 4.8e-72 274.6 159 78.6
Potri.018G143500 Populus trichocarpa HOM05D006321 ORTHO05D007929 4.8e-72 274.6 163 79.1
A10p14640 Brassica napus HOM05D006321 ORTHO05D007929 6.2e-72 274.2 162 74.7
BraA10t43551Z Brassica rapa HOM05D006321 ORTHO05D007929 6.2e-72 274.2 162 74.7
Sed0024765 Sechium edule HOM05D006321 ORTHO05D007929 6.2e-72 274.2 155 79.4
FAN07G2214 Fragaria x ananassa HOM05D006321 ORTHO05D007929 1.4e-71 273.1 152 80.9
PGR142G1933 Punica granatum HOM05D006321 ORTHO05D007929 1.4e-71 273.1 162 77.8
GSVIVG01010872001 Vitis vinifera HOM05D006321 ORTHO05D007929 1.4e-71 273.1 156 80.8
Phvul.003G138800 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 3.1e-71 271.9 162 78.4
Phvul.003G139178 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 3.1e-71 271.9 162 78.4
Psat4g027120 Pisum sativum HOM05D006321 ORTHO05D007929 3.1e-71 271.9 162 77.2
arahy.Tifrunner.gnm1.ann1.N3I1N2 Arachis hypogaea HOM05D006321 ORTHO05D007929 4.0e-71 271.6 153 81.0
Psat2g182520 Pisum sativum HOM05D006321 ORTHO05D004512 4.0e-71 271.6 161 77.0
Thhalv10014893m.g Eutrema salsugineum HOM05D006321 ORTHO05D007929 5.3e-71 271.2 162 74.1
MBI17_g07973_MAGBIO Magnolia biondii HOM05D006321 ORTHO05D007929 5.3e-71 271.2 159 74.8
Sc03g0007150 Simmondsia chinensis HOM05D006321 ORTHO05D007929 5.3e-71 271.2 162 75.3
Solyc07g008910.3 Solanum lycopersicum HOM05D006321 ORTHO05D007929 5.3e-71 271.2 159 76.1
BcaC04g19986 Brassica carinata HOM05D006321 ORTHO05D007929 6.9e-71 270.8 162 73.5
Nitab4.5_0002365g0010 Nicotiana tabacum HOM05D006321 ORTHO05D007929 6.9e-71 270.8 162 74.1
PSO339G6079 Papaver somniferum HOM05D006321 ORTHO05D007929 6.9e-71 270.8 162 72.2
Eucgr.C00122 Eucalyptus grandis HOM05D006321 ORTHO05D007929 9.0e-71 270.4 160 76.2
Medtr3g465100 Medicago truncatula HOM05D006321 ORTHO05D007929 1.2e-70 270.0 162 76.5
Nitab4.5_0000366g0180 Nicotiana tabacum HOM05D006321 ORTHO05D007929 1.5e-70 269.6 162 74.7
AL8G33200 Arabidopsis lyrata HOM05D006321 ORTHO05D007929 2.0e-70 269.2 162 72.8
Sp6g18970 Schrenkiella parvula HOM05D006321 ORTHO05D007929 2.0e-70 269.2 162 73.5
Carub.0008s1773 Capsella rubella HOM05D006321 ORTHO05D007929 2.6e-70 268.9 162 72.2
BcaB08g36085 Brassica carinata HOM05D006321 ORTHO05D007929 4.5e-70 268.1 162 73.5
Thecc.09G184700 Theobroma cacao HOM05D006321 ORTHO05D007929 4.5e-70 268.1 157 77.1
Gohir.A06G171500 Gossypium hirsutum HOM05D006321 ORTHO05D007929 5.8e-70 267.7 160 76.9
Gorai.010G210200 Gossypium raimondii HOM05D006321 ORTHO05D007929 5.8e-70 267.7 160 76.9
Lalb_Chr04g0263391 Lupinus albus HOM05D006321 ORTHO05D007929 7.6e-70 267.3 160 75.0
MD16G1249800 Malus domestica HOM05D006321 ORTHO05D007929 7.6e-70 267.3 149 81.2
AT5G57230 Arabidopsis thaliana HOM05D006321 ORTHO05D007929 9.9e-70 266.9 162 72.2
CAN.G547.21 Capsicum annuum HOM05D006321 ORTHO05D007929 1.3e-69 266.5 159 74.8
CARHR271020 Cardamine hirsuta HOM05D006321 ORTHO05D007929 1.7e-69 266.2 162 72.2
PGSC0003DMG400028738 Solanum tuberosum HOM05D006321 ORTHO05D007929 1.7e-69 266.2 159 74.2
CAN.G279.32 Capsicum annuum HOM05D006321 ORTHO05D007929 2.2e-69 265.8 159 74.8
Gohir.D06G179600 Gossypium hirsutum HOM05D006321 ORTHO05D007929 2.2e-69 265.8 160 76.2
Manes.02G106300 Manihot esculenta HOM05D006321 ORTHO05D007929 2.2e-69 265.8 162 75.3
TPR.G32885 Trifolium pratense HOM05D006321 ORTHO05D007929 2.2e-69 265.8 162 75.9
COL.COLO4_07534 Corchorus olitorius HOM05D006321 ORTHO05D007929 2.9e-69 265.4 152 78.9
MELO3C012967.2 Cucumis melo HOM05D006321 ORTHO05D007929 3.8e-69 265.0 155 76.8
Aa31LG3G13120 Aethionema arabicum HOM05D006321 ORTHO05D007929 8.4e-69 263.8 162 72.8
C09p49090 Brassica napus HOM05D006321 ORTHO05D007929 1.1e-68 263.5 170 70.0
PSO384G3851 Papaver somniferum HOM05D006321 ORTHO05D007929 1.1e-68 263.5 162 69.8
Potri.006G076300 Populus trichocarpa HOM05D006321 ORTHO05D007929 1.9e-68 262.7 163 75.5
CsaV3_3G025050 Cucumis sativus L. HOM05D006321 ORTHO05D007929 2.4e-68 262.3 155 75.5
MSTRG.10445 Avicennia marina HOM05D006321 ORTHO05D007929 4.2e-68 261.5 162 74.7
BolC9t57758H Brassica oleracea HOM05D006321 ORTHO05D007929 5.5e-68 261.2 168 69.6
Migut.L01889 Erythranthe guttata HOM05D006321 ORTHO05D007929 2.1e-67 259.2 159 74.2
Lj6g0010246 Lotus japonicus HOM05D006321 ORTHO05D007929 2.7e-67 258.8 162 73.5
ECA240G2363 Erigeron canadensis HOM05D006321 ORTHO05D007929 7.9e-67 257.3 162 71.6
AUR62030699 Chenopodium quinoa HOM05D006321 ORTHO05D007929 1.8e-66 256.1 162 71.0
EL10Ac5g11827 Beta vulgaris HOM05D006321 ORTHO05D007929 2.3e-66 255.8 162 72.2
AUR62030694 Chenopodium quinoa HOM05D006321 ORTHO05D007929 3.9e-66 255.0 162 70.4
HanXRQChr16g0529271 Helianthus annuus HOM05D006321 ORTHO05D007929 3.9e-66 255.0 162 69.8
HPP92_002000 Vanilla planifolia HOM05D006321 ORTHO05D007929 5.1e-66 254.6 158 71.5
Lsat_1_v5_gn_7_55681 Lactuca sativa HOM05D006321 ORTHO05D007929 6.7e-66 254.2 161 72.0
ECA234G0872 Erigeron canadensis HOM05D006321 ORTHO05D007929 8.7e-66 253.8 162 71.6
Os06g0482200 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 1.9e-65 252.7 156 70.5
HanXRQChr03g0068421 Helianthus annuus HOM05D006321 ORTHO05D007929 9.6e-65 250.4 153 71.9
Os10g0162834 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 2.1e-64 249.2 156 69.9
Ah.12g059430 Amaranthus hybridus HOM05D006321 ORTHO05D007929 4.8e-64 248.1 156 70.5
SGA_v2.0_scaffold21G09650 Striga asiatica HOM05D006321 ORTHO05D007929 2.4e-63 245.7 159 71.1
Hund14984 Selenicereus undatus HOM05D006321 ORTHO05D007929 4.0e-63 245.0 215 55.8
Nn2g12444 Nelumbo nucifera HOM05D006321 ORTHO05D007929 9.0e-63 243.8 136 80.1
Actinidia01283 Actinidia chinensis HOM05D006321 ORTHO05D007929 1.2e-62 243.4 162 72.2
Zm00001eb161640 Zea mays HOM05D006321 ORTHO05D007929 1.5e-62 243.0 150 70.7
Cpa.g.sc95.16 Carica papaya HOM05D006321 ORTHO05D007929 1.3e-61 240.0 162 71.0
MD13G1243200 Malus domestica HOM05D006321 ORTHO05D007929 2.2e-61 239.2 139 77.0
SEGI_34333 Sequoiadendron giganteum HOM05D006321 ORTHO05D007929 3.8e-61 238.4 158 65.2
unitig_736.g22252 Utricularia gibba HOM05D006321 ORTHO05D007929 1.3e-58 229.9 139 73.4
CDE06G2300 Ceratophyllum demersum HOM05D006321 ORTHO05D007929 1.8e-58 229.6 136 75.7
Haze_22010 Corylus avellana HOM05D006321 ORTHO05D007929 1.8e-58 229.6 153 69.9
Sopen07g004840 Solanum pennellii HOM05D003168 ORTHO05D003590 2.1e-56 222.6 136 72.8
AUR62036340 Chenopodium quinoa HOM05D006321 ORTHO05D007929 2.4e-55 219.2 136 72.8
Pp3c22_13020 Physcomitrium patens HOM05D006321 ORTHO05D007929 1.1e-52 210.3 146 60.3
Psat5g235880 Pisum sativum HOM05D006321 ORTHO05D007929 5.5e-52 208.0 138 71.0
FAN17G2672 Fragaria x ananassa HOM05D006321 ORTHO05D007929 1.6e-51 206.5 161 63.4
Sabra18G0117000 Salix brachista HOM05D003168 ORTHO05D003525 1.6e-51 206.5 118 78.8
Migut.G01073 Erythranthe guttata HOM05D006321 ORTHO05D007929 3.5e-51 205.3 119 78.2
Mapoly0003s0233 Marchantia polymorpha HOM05D006321 ORTHO05D007929 6.1e-51 204.5 143 60.1
Oeu044678.1 Olea europaea HOM05D006321 ORTHO05D007929 3.9e-50 201.8 114 77.2
Mapoly0003s0169 Marchantia polymorpha HOM05D006321 ORTHO05D007929 4.3e-49 198.4 143 58.7
vmacro20823 Vaccinium macrocarpon HOM05D006321 ORTHO05D007929 5.7e-49 198.0 141 63.8
Sabra06G0057200 Salix brachista HOM05D006321 ORTHO05D007929 2.8e-48 195.7 184 54.9
Oeu030095.1 Olea europaea HOM05D006321 ORTHO05D007929 1.8e-47 193.0 115 75.7
PSO541G2755 Papaver somniferum HOM05D006321 ORTHO05D007929 4.1e-47 191.8 114 71.9
Peaxi162Scf00324g00017 Petunia axillaris HOM05D006321 ORTHO05D007929 4.5e-46 188.3 106 79.2
Aqoxy108s003 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 2.5e-44 182.6 133 61.7
ATR1152G025 Amborella trichopoda HOM05D006321 ORTHO05D007929 2.7e-43 179.1 96 79.2
Lj6A87G16 Lonicera japonica HOM05D006321 ORTHO05D007929 6.7e-42 174.5 95 80.0
CBR_g19745 Chara braunii HOM05D006321 ORTHO05D007929 1.0e-37 160.6 132 57.6
DCAR_005801 Daucus carota HOM05D006321 ORTHO05D007929 1.2e-35 153.7 100 65.0
TAR629G2308 Trochodendron aralioides HOM05D006321 ORTHO05D007929 2.1e-35 152.9 136 56.6
BcaB05g22329 Brassica carinata HOM05D006321 ORTHO05D007929 5.1e-34 148.3 159 51.6
COL.COLO4_32845 Corchorus olitorius HOM05D006321 ORTHO05D007929 4.1e-31 138.7 85 74.1
Dinv41168 Davidia involucrata HOM05D000015 ORTHO05D003525 2.6e-30 136.0 86 72.1
Lj6A100T20 Lonicera japonica HOM05D006321 ORTHO05D007929 4.4e-25 118.6 73 72.6
Sopen00g012850 Solanum pennellii HOM05D006321 ORTHO05D007929 4.0e-18 95.5 53 77.4
BolC2t07570H Brassica oleracea HOM05D006321 ORTHO05D007929 8.3e-16 87.8 61 68.9
C02p14450 Brassica napus HOM05D006321 ORTHO05D007929 1.7e-08 63.5 68 45.6


User provided reference genes

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