Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G0211 Cannabis sativa HOM05D007387 ORTHO05D009321 8.6e-83 310.5 177 100.0
RcHm_v2.0_Chr6g0266971 Rosa chinensis HOM05D007387 ORTHO05D009321 1.1e-21 107.5 59 86.4
VMungo1127G0459 Vigna mungo HOM05D007387 ORTHO05D009321 7.1e-21 104.8 59 83.1
ClCG02G004690 Citrullus lanatus HOM05D007387 ORTHO05D009321 1.6e-20 103.6 60 78.3
Glyma.11G113100 Glycine max HOM05D007387 ORTHO05D009321 1.6e-20 103.6 59 83.1
Phvul.011G041100 Phaseolus vulgaris HOM05D007387 ORTHO05D009321 2.1e-20 103.2 175 47.4
QL11p045571 Quercus lobata HOM05D007387 ORTHO05D009321 2.1e-20 103.2 62 75.8
FAN15G3112 Fragaria x ananassa HOM05D007387 ORTHO05D009321 2.7e-20 102.8 179 40.2
Glyma.12G039000 Glycine max HOM05D007387 ORTHO05D009321 2.7e-20 102.8 176 52.3
FAN24G0663 Fragaria x ananassa HOM05D007387 ORTHO05D009321 3.5e-20 102.4 186 40.3
FvH4_2g10040 Fragaria vesca HOM05D007387 ORTHO05D009321 6.0e-20 101.7 186 40.3
Sed0010335 Sechium edule HOM05D007387 ORTHO05D009321 6.0e-20 101.7 60 78.3
Prupe.8G088200 Prunus persica HOM05D007387 ORTHO05D009321 1.3e-19 100.5 193 49.2
MELO3C013435.2 Cucumis melo HOM05D007387 ORTHO05D009321 1.8e-19 100.1 189 40.7
CsaV3_7G000220 Cucumis sativus L. HOM05D007387 ORTHO05D009321 2.3e-19 99.8 189 40.2
Sed0000236 Sechium edule HOM05D007387 ORTHO05D009321 2.3e-19 99.8 58 79.3
CiPaw.06G131100 Carya illinoinensis HOM05D007387 ORTHO05D009321 3.9e-19 99.0 60 76.7
Ca_20916_v3 Cicer arietinum L. HOM05D007387 ORTHO05D009321 6.7e-19 98.2 175 40.0
FAN27G1365 Fragaria x ananassa HOM05D007387 ORTHO05D009321 6.7e-19 98.2 184 40.2
MD10G1066200 Malus domestica HOM05D007387 ORTHO05D009321 8.7e-19 97.8 187 47.1
TWI31G1242 Tripterygium wilfordii HOM05D007387 ORTHO05D009321 9.6e-18 94.4 166 37.3
Atru.chr5.3107 Acer truncatum HOM05D007387 ORTHO05D009321 1.3e-17 94.0 60 73.3
Potri.004G160700 Populus trichocarpa HOM05D007387 ORTHO05D009321 1.6e-17 93.6 58 75.9
Sabra04G0107500 Salix brachista HOM05D007387 ORTHO05D009321 2.1e-17 93.2 61 72.1
Sabra09G0094000 Salix brachista HOM05D007387 ORTHO05D009321 3.7e-17 92.4 58 75.9
Gohir.A04G124100 Gossypium hirsutum HOM05D007387 ORTHO05D009321 1.1e-16 90.9 67 70.1
Actinidia00563 Actinidia chinensis HOM05D001785 ORTHO05D001933 1.8e-16 90.1 59 69.5
Cfa005072 Carpinus fangiana HOM05D007387 ORTHO05D009321 3.1e-16 89.4 62 71.0
Gohir.D04G166200 Gossypium hirsutum HOM05D007387 ORTHO05D009321 3.1e-16 89.4 67 70.1
Gorai.012G154600 Gossypium raimondii HOM05D007387 ORTHO05D009321 3.1e-16 89.4 67 70.1
Lalb_Chr03g0025431 Lupinus albus HOM05D007387 ORTHO05D009321 4.1e-16 89.0 57 75.4
Dinv42018 Davidia involucrata HOM05D007387 ORTHO05D009321 9.0e-16 87.8 61 67.2
Duzib132G0100 Durio zibethinus HOM05D007387 ORTHO05D009321 9.0e-16 87.8 182 41.2
arahy.Tifrunner.gnm1.ann1.WH0Y0U Arachis hypogaea HOM05D007387 ORTHO05D009321 2.0e-15 86.7 136 53.7
Actinidia11742 Actinidia chinensis HOM05D007387 ORTHO05D009321 5.8e-15 85.1 59 67.8
Potri.009G121700 Populus trichocarpa HOM05D007387 ORTHO05D009321 7.6e-15 84.7 183 35.0
Lalb_Chr19g0138881 Lupinus albus HOM05D007387 ORTHO05D009321 1.3e-14 84.0 175 44.6
Manes.11G087600 Manihot esculenta HOM05D007387 ORTHO05D009321 1.3e-14 84.0 186 33.3
Thecc.02G078400 Theobroma cacao HOM05D007387 ORTHO05D009321 2.9e-14 82.8 162 43.8
Cc02_g17100 Coffea canephora HOM05D007387 ORTHO05D009321 3.8e-14 82.4 164 34.8
Cpa.g.sc139.28 Carica papaya HOM05D007387 ORTHO05D009321 5.0e-14 82.0 191 40.3
Gohir.D12G030300 Gossypium hirsutum HOM05D007387 ORTHO05D009321 5.0e-14 82.0 65 63.1
Lj3g0012874 Lotus japonicus HOM05D007387 ORTHO05D009321 5.0e-14 82.0 180 43.9
TWI79G0383 Tripterygium wilfordii HOM05D007387 ORTHO05D009321 5.0e-14 82.0 157 36.3
vmacro02067 Vaccinium macrocarpon HOM05D007387 ORTHO05D009321 5.0e-14 82.0 61 63.9
Duzib248G1112 Durio zibethinus HOM05D007387 ORTHO05D009321 6.5e-14 81.6 173 43.4
TPR.G30501 Trifolium pratense HOM05D000711 ORTHO05D000545 6.5e-14 81.6 53 71.7
Gohir.A12G041900 Gossypium hirsutum HOM05D007387 ORTHO05D009321 8.4e-14 81.3 65 63.1
Nitab4.5_0002723g0090 Nicotiana tabacum HOM05D005703 ORTHO05D006643 1.9e-13 80.1 60 63.3
PGR142G2532 Punica granatum HOM05D007387 ORTHO05D009321 1.9e-13 80.1 60 65.0
THA.LOC104807296 Tarenaya hassleriana HOM05D007387 ORTHO05D009321 2.5e-13 79.7 56 69.6
FAN15G0178 Fragaria x ananassa HOM05D007387 ORTHO05D009321 3.2e-13 79.3 50 76.0
Medtr4g071120 Medicago truncatula HOM05D007387 ORTHO05D009321 4.2e-13 79.0 171 47.4
Psat7g182600 Pisum sativum HOM05D007387 ORTHO05D009321 4.2e-13 79.0 177 44.1
Sc18g0005240 Simmondsia chinensis HOM05D007387 ORTHO05D009321 5.5e-13 78.6 56 62.5
MD05G1058600 Malus domestica HOM05D007387 ORTHO05D009321 7.2e-13 78.2 188 44.1
Nitab4.5_0011132g0020 Nicotiana tabacum HOM05D005703 ORTHO05D006643 7.2e-13 78.2 60 61.7
Sp7g32420 Schrenkiella parvula HOM05D007387 ORTHO05D009321 1.2e-12 77.4 61 62.3
Eucgr.I01309 Eucalyptus grandis HOM05D007387 ORTHO05D009321 1.6e-12 77.0 208 40.4
Oeu008575.1 Olea europaea HOM05D007387 ORTHO05D009321 3.5e-12 75.9 159 44.7
Aa31LG2G15890 Aethionema arabicum HOM05D007387 ORTHO05D009321 6.1e-12 75.1 97 43.3
Ciclev10029309m.g Citrus clementina HOM05D007387 ORTHO05D009321 7.9e-12 74.7 58 60.3
AL7G16570 Arabidopsis lyrata HOM05D007387 ORTHO05D009321 1.0e-11 74.3 62 61.3
HanXRQChr16g0505141 Helianthus annuus HOM05D007387 ORTHO05D009321 1.3e-11 73.9 59 57.6
A01p03860 Brassica napus HOM05D007387 ORTHO05D009321 2.3e-11 73.2 62 62.9
FAN21G1657 Fragaria x ananassa HOM05D007387 ORTHO05D009321 2.3e-11 73.2 50 72.0
arahy.Tifrunner.gnm1.ann1.TWZZ0X Arachis hypogaea HOM05D007387 ORTHO05D009321 3.0e-11 72.8 166 47.6
FAN25G2925 Fragaria x ananassa HOM05D007387 ORTHO05D009321 3.0e-11 72.8 49 73.5
Thhalv10026183m.g Eutrema salsugineum HOM05D007387 ORTHO05D009321 3.9e-11 72.4 61 59.0
DCAR_003650 Daucus carota HOM05D007387 ORTHO05D009321 5.1e-11 72.0 59 61.0
ECA236G2541 Erigeron canadensis HOM05D007387 ORTHO05D009321 5.1e-11 72.0 64 57.8
Carub.0007s0565 Capsella rubella HOM05D007387 ORTHO05D009321 6.7e-11 71.6 61 59.0
DCAR_009554 Daucus carota HOM05D007387 ORTHO05D009321 1.1e-10 70.9 59 62.7
HanXRQChr04g0127721 Helianthus annuus HOM05D007387 ORTHO05D009321 1.5e-10 70.5 59 57.6
BcaNung04919 Brassica carinata HOM05D007387 ORTHO05D009321 1.9e-10 70.1 62 59.7
Solyc01g110150.2 Solanum lycopersicum HOM05D007387 ORTHO05D009321 1.9e-10 70.1 58 58.6
TWI75G1034 Tripterygium wilfordii HOM05D007387 ORTHO05D009321 5.7e-10 68.6 54 63.0
Actinidia12738 Actinidia chinensis HOM05D007387 ORTHO05D009321 7.4e-10 68.2 57 63.2
Actinidia27864 Actinidia chinensis HOM05D007387 ORTHO05D009321 7.4e-10 68.2 57 63.2
BcaNung04916 Brassica carinata HOM05D007387 ORTHO05D009321 7.4e-10 68.2 62 58.1
Peaxi162Scf00003g00073 Petunia axillaris HOM05D007387 ORTHO05D009321 7.4e-10 68.2 55 61.8
CAN.G170.83 Capsicum annuum HOM05D007387 ORTHO05D009321 2.2e-09 66.6 190 37.4
FAN20G0098 Fragaria x ananassa HOM05D007387 ORTHO05D009321 2.8e-09 66.2 50 68.0
EL10Ac9g21673 Beta vulgaris HOM05D007387 ORTHO05D009321 3.7e-09 65.9 60 58.3
Hma1.2p1_0066F.1_g035940 Hydrangea macrophylla HOM05D007387 ORTHO05D009321 4.8e-09 65.5 59 59.3
PGSC0003DMG400030970 Solanum tuberosum HOM05D007387 ORTHO05D009321 8.2e-09 64.7 175 42.9
Lsat_1_v5_gn_7_91901 Lactuca sativa HOM05D007387 ORTHO05D009321 1.1e-08 64.3 198 37.4
Oeu055620.1 Olea europaea HOM05D007387 ORTHO05D009321 1.1e-08 64.3 57 52.6
Ah.01g018920 Amaranthus hybridus HOM05D001785 ORTHO05D001933 1.4e-08 63.9 160 37.5
BcaNung00681 Brassica carinata HOM05D007387 ORTHO05D009321 1.4e-08 63.9 62 61.3
C01p04170 Brassica napus HOM05D007387 ORTHO05D009321 1.4e-08 63.9 62 61.3
BolC1t00405H Brassica oleracea HOM05D007387 ORTHO05D009321 1.4e-08 63.9 62 61.3
BraA01t00373Z Brassica rapa HOM05D007387 ORTHO05D009321 1.4e-08 63.9 62 61.3
CARHR242940 Cardamine hirsuta HOM05D007387 ORTHO05D009321 1.8e-08 63.5 61 60.7
AT4G34630 Arabidopsis thaliana HOM05D007387 ORTHO05D009321 2.4e-08 63.2 51 64.7
CARHR106690 Cardamine hirsuta HOM05D007387 ORTHO05D009321 9.0e-08 61.2 57 54.4
Sopen01g052310 Solanum pennellii HOM05D007387 ORTHO05D009321 1.2e-07 60.8 180 40.0
FvH4_4g16763 Fragaria vesca HOM05D007387 ORTHO05D009321 3.4e-07 59.3 36 83.3
Haze_02310 Corylus avellana HOM05D007387 ORTHO05D009321 2.2e-06 56.6 43 67.4


User provided reference genes

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