Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G0200 Cannabis sativa HOM05D007012 ORTHO05D008882 1.6e-62 242.7 126 100.0
RcHm_v2.0_Chr5g0015911 Rosa chinensis HOM05D007012 ORTHO05D008882 9.8e-49 196.8 121 81.8
Atru.chr10.869 Acer truncatum HOM05D007012 ORTHO05D008882 2.9e-48 195.3 121 81.0
FAN25G0029 Fragaria x ananassa HOM05D007012 ORTHO05D008882 3.7e-48 194.9 122 79.5
QL05p061226 Quercus lobata HOM05D007012 ORTHO05D008882 6.4e-48 194.1 125 78.4
MD10G1253600 Malus domestica HOM05D007012 ORTHO05D008882 1.9e-47 192.6 121 81.0
FvH4_3g10060 Fragaria vesca HOM05D007012 ORTHO05D008882 3.2e-47 191.8 122 78.7
FAN21G1693 Fragaria x ananassa HOM05D007012 ORTHO05D008882 3.2e-47 191.8 122 77.9
CiPaw.09G115600 Carya illinoinensis HOM05D007012 ORTHO05D008882 7.0e-47 190.7 123 81.3
PGR031G1292 Punica granatum HOM05D007012 ORTHO05D008882 1.6e-46 189.5 122 78.7
Eucgr.K01942 Eucalyptus grandis HOM05D007012 ORTHO05D008882 2.7e-46 188.7 125 76.0
GSVIVG01021626001 Vitis vinifera HOM05D007012 ORTHO05D008882 2.7e-46 188.7 123 77.2
Potri.011G098200 Populus trichocarpa HOM05D007012 ORTHO05D008882 4.6e-46 188.0 119 79.8
Cc09_g08050 Coffea canephora HOM05D007012 ORTHO05D008882 6.0e-46 187.6 120 77.5
Gohir.A06G207700 Gossypium hirsutum HOM05D007012 ORTHO05D008882 6.0e-46 187.6 126 75.4
Manes.14G122800 Manihot esculenta HOM05D007012 ORTHO05D008882 6.0e-46 187.6 122 76.2
Sabra11G0090900 Salix brachista HOM05D007012 ORTHO05D008882 1.0e-45 186.8 119 80.7
Prupe.4G090000 Prunus persica HOM05D007012 ORTHO05D008882 1.7e-45 186.0 119 77.3
TWI73G0699 Tripterygium wilfordii HOM05D007012 ORTHO05D008882 1.7e-45 186.0 123 78.0
vmacro03442 Vaccinium macrocarpon HOM05D007012 ORTHO05D008882 1.7e-45 186.0 123 76.4
Sabra11G0084700 Salix brachista HOM05D007012 ORTHO05D008882 3.0e-45 185.3 119 79.8
MD05G1273800 Malus domestica HOM05D007012 ORTHO05D008882 6.6e-45 184.1 121 77.7
Gohir.D06G213600 Gossypium hirsutum HOM05D007012 ORTHO05D008882 8.6e-45 183.7 126 73.8
Gorai.010G252500 Gossypium raimondii HOM05D007012 ORTHO05D008882 8.6e-45 183.7 126 73.8
Ciclev10017190m.g Citrus clementina HOM05D007012 ORTHO05D008882 1.1e-44 183.3 122 77.0
Solyc02g069820.3 Solanum lycopersicum HOM05D007012 ORTHO05D008882 1.9e-44 182.6 123 73.2
Nitab4.5_0001225g0050 Nicotiana tabacum HOM05D007012 ORTHO05D008882 2.5e-44 182.2 123 73.2
CSS0014344 Camellia sinensis var. sinensis HOM05D007012 ORTHO05D008882 3.3e-44 181.8 122 75.4
CiPaw.10G085800 Carya illinoinensis HOM05D007012 ORTHO05D008882 3.3e-44 181.8 123 77.2
Thecc.06G001300 Theobroma cacao HOM05D007012 ORTHO05D008882 3.3e-44 181.8 123 74.0
Peaxi162Scf00100g01517 Petunia axillaris HOM05D007012 ORTHO05D008882 4.3e-44 181.4 123 72.4
Sopen02g018980 Solanum pennellii HOM05D007012 ORTHO05D008882 4.3e-44 181.4 123 73.2
arahy.Tifrunner.gnm1.ann1.80D497 Arachis hypogaea HOM05D007012 ORTHO05D008882 5.6e-44 181.0 126 70.6
PGSC0003DMG400021126 Solanum tuberosum HOM05D007012 ORTHO05D008882 7.3e-44 180.6 123 72.4
arahy.Tifrunner.gnm1.ann1.HAVC5G Arachis hypogaea HOM05D007012 ORTHO05D008882 9.5e-44 180.3 124 71.0
HanXRQChr15g0468791 Helianthus annuus HOM05D007012 ORTHO05D008882 9.5e-44 180.3 121 76.0
Sed0027179 Sechium edule HOM05D007012 ORTHO05D008882 9.5e-44 180.3 124 73.4
Lsat_1_v5_gn_1_117760 Lactuca sativa HOM05D007012 ORTHO05D008882 1.6e-43 179.5 123 74.0
TWI09G0010 Tripterygium wilfordii HOM05D007012 ORTHO05D008882 1.6e-43 179.5 123 76.4
Hma1.2p1_0333F.1_g128270 Hydrangea macrophylla HOM05D007012 ORTHO05D008882 2.1e-43 179.1 123 74.0
Nitab4.5_0004615g0020 Nicotiana tabacum HOM05D007012 ORTHO05D008882 2.1e-43 179.1 123 71.5
TAR629G2694 Trochodendron aralioides HOM05D007012 ORTHO05D008882 2.8e-43 178.7 123 71.5
CAN.G1520.3 Capsicum annuum HOM05D007012 ORTHO05D008882 4.7e-43 177.9 122 74.6
Dinv35474 Davidia involucrata HOM05D007012 ORTHO05D008882 6.2e-43 177.6 120 72.5
QL05p061674 Quercus lobata HOM05D007012 ORTHO05D008882 6.2e-43 177.6 157 62.4
Ah.02g129420 Amaranthus hybridus HOM05D007012 ORTHO05D008882 2.3e-42 175.6 118 78.0
Rhsim05G0222100 Rhododendron simsii HOM05D007012 ORTHO05D008882 2.3e-42 175.6 123 71.5
AUR62005835 Chenopodium quinoa HOM05D007012 ORTHO05D008882 3.1e-42 175.3 121 73.6
AUR62032828 Chenopodium quinoa HOM05D007012 ORTHO05D008882 3.1e-42 175.3 121 73.6
SGA_v2.0_scaffold1G00245 Striga asiatica HOM05D007012 ORTHO05D008882 3.1e-42 175.3 122 70.5
BcaC06g30880 Brassica carinata HOM05D007012 ORTHO05D008882 4.0e-42 174.9 119 71.4
HPP92_000966 Vanilla planifolia HOM05D007012 ORTHO05D008882 6.8e-42 174.1 120 72.5
CARHR152280 Cardamine hirsuta HOM05D007012 ORTHO05D008882 1.2e-41 173.3 119 71.4
PSO675G5463 Papaver somniferum HOM05D007012 ORTHO05D008882 1.2e-41 173.3 120 71.7
AL5G19030 Arabidopsis lyrata HOM05D007012 ORTHO05D008882 2.6e-41 172.2 119 71.4
Glyma.05G166500 Glycine max HOM05D007012 ORTHO05D008882 2.6e-41 172.2 122 70.5
PSO541G1654 Papaver somniferum HOM05D007012 ORTHO05D008882 2.6e-41 172.2 120 70.0
ClCG02G000770 Citrullus lanatus HOM05D007012 ORTHO05D008882 3.4e-41 171.8 124 70.2
Sp2g17760 Schrenkiella parvula HOM05D007012 ORTHO05D008882 3.4e-41 171.8 119 70.6
MSTRG.7536 Avicennia marina HOM05D007012 ORTHO05D008882 4.4e-41 171.4 120 70.0
Migut.M00621 Erythranthe guttata HOM05D007012 ORTHO05D008882 5.8e-41 171.0 115 71.3
MELO3C023274.2 Cucumis melo HOM05D007012 ORTHO05D008882 7.5e-41 170.6 124 69.4
EL10Ac6g13254 Beta vulgaris HOM05D007012 ORTHO05D008882 9.8e-41 170.2 116 75.9
BcaC06g33671 Brassica carinata HOM05D007012 ORTHO05D008882 9.8e-41 170.2 119 68.9
A06p40130 Brassica napus HOM05D007012 ORTHO05D008882 9.8e-41 170.2 119 68.9
C07p38010 Brassica napus HOM05D007012 ORTHO05D008882 9.8e-41 170.2 119 68.9
BolC7t44322H Brassica oleracea HOM05D007012 ORTHO05D008882 9.8e-41 170.2 119 68.9
Thhalv10005148m.g Eutrema salsugineum HOM05D007012 ORTHO05D008882 9.8e-41 170.2 119 69.7
Actinidia03306 Actinidia chinensis HOM05D007012 ORTHO05D008882 1.3e-40 169.9 123 69.1
TPR.G6804 Trifolium pratense HOM05D007012 ORTHO05D008882 1.3e-40 169.9 126 65.9
Migut.M01889 Erythranthe guttata HOM05D007012 ORTHO05D008882 1.7e-40 169.5 119 69.7
Migut.M01890 Erythranthe guttata HOM05D007012 ORTHO05D008882 1.7e-40 169.5 115 70.4
Carub.0005s0786 Capsella rubella HOM05D007012 ORTHO05D008882 2.2e-40 169.1 119 67.2
unitig_748.g7806 Utricularia gibba HOM05D007012 ORTHO05D008882 2.9e-40 168.7 120 67.5
Lj4g0006275 Lotus japonicus HOM05D007012 ORTHO05D008882 4.9e-40 167.9 117 70.1
ECA248G1541 Erigeron canadensis HOM05D007012 ORTHO05D008882 8.3e-40 167.2 119 73.9
Aa31LG2G4090 Aethionema arabicum HOM05D007012 ORTHO05D008882 1.1e-39 166.8 119 67.2
Lalb_Chr12g0204651 Lupinus albus HOM05D007012 ORTHO05D008882 3.2e-39 165.2 120 69.2
THA.LOC104805486 Tarenaya hassleriana HOM05D007012 ORTHO05D008882 3.2e-39 165.2 118 67.8
SalBow8G4607 Salvia bowleyana HOM05D007012 ORTHO05D008882 4.1e-39 164.9 138 62.3
Hund20768 Selenicereus undatus HOM05D007012 ORTHO05D008882 1.2e-38 163.3 120 70.0
Phvul.002G246900 Phaseolus vulgaris HOM05D007012 ORTHO05D008882 4.6e-38 161.4 123 65.9
Sc24g0001360 Simmondsia chinensis HOM05D007012 ORTHO05D008882 3.9e-37 158.3 121 67.8
Medtr8g088380 Medicago truncatula HOM05D007012 ORTHO05D008882 5.1e-37 157.9 124 62.1
Psat7g066160 Pisum sativum HOM05D007012 ORTHO05D008882 5.1e-37 157.9 122 63.1
Os03g0640400 Oryza sativa ssp. japonica HOM05D007012 ORTHO05D008882 3.6e-35 151.8 111 64.0
Zm00001eb218740 Zea mays HOM05D007012 ORTHO05D008882 1.8e-34 149.4 122 58.2
Migut.M00618 Erythranthe guttata HOM05D007012 ORTHO05D008882 5.2e-34 147.9 104 68.3
Sed0002894 Sechium edule HOM05D007012 ORTHO05D008882 5.2e-34 147.9 101 71.3
CDE08G0050 Ceratophyllum demersum HOM05D007012 ORTHO05D008882 3.4e-33 145.2 102 65.7
BraA06t26928Z Brassica rapa HOM05D007012 ORTHO05D008882 2.2e-32 142.5 174 46.6
FAN16G3160 Fragaria x ananassa HOM05D007012 ORTHO05D008882 2.9e-32 142.1 90 78.9
FAN11G2674 Fragaria x ananassa HOM05D007012 ORTHO05D008882 6.4e-32 141.0 90 78.9
SEGI_30962 Sequoiadendron giganteum HOM05D007012 ORTHO05D008882 4.1e-31 138.3 118 60.2
AT3G29130 Arabidopsis thaliana HOM05D007012 ORTHO05D008882 7.1e-31 137.5 87 74.7
Oeu034103.1 Olea europaea HOM05D007012 ORTHO05D008882 7.8e-30 134.0 88 75.0
Cfa000822 Carpinus fangiana HOM05D007012 ORTHO05D008882 1.0e-29 133.7 89 74.2
Hma1.2p1_0333F.1_g128260 Hydrangea macrophylla HOM05D007012 ORTHO05D008882 8.6e-29 130.6 88 75.0
Haze_05817 Corylus avellana HOM05D007012 ORTHO05D008882 3.6e-27 125.2 95 67.4
VMungo0251G0322 Vigna mungo HOM05D007012 ORTHO05D008882 1.4e-26 123.2 93 66.7
CDE08G0396 Ceratophyllum demersum HOM05D007012 ORTHO05D008882 2.4e-26 122.5 100 61.0
CsaV3_2G017990 Cucumis sativus L. HOM05D007012 ORTHO05D008882 1.2e-25 120.2 90 66.7
SEGI_05812 Sequoiadendron giganteum HOM05D007012 ORTHO05D008882 2.0e-25 119.4 81 69.1
Aqoxy1G01570 Aquilegia oxysepala HOM05D007012 ORTHO05D008882 5.8e-25 117.9 99 60.6
AagrBONN_evm.TU.Sc2ySwM_368.2441 Anthoceros agrestis HOM05D007012 ORTHO05D008882 9.9e-25 117.1 122 50.8
Mapoly0001s0437 Marchantia polymorpha HOM05D007012 ORTHO05D008882 2.2e-24 115.9 122 45.9
Pp3c17_18250 Physcomitrium patens HOM05D007012 ORTHO05D008882 6.4e-24 114.4 122 51.6
ATR0165G051 Amborella trichopoda HOM05D007012 ORTHO05D008882 6.0e-22 107.8 93 60.2
CBR_g52649 Chara braunii HOM05D007012 ORTHO05D008882 6.0e-22 107.8 114 43.9
AagrBONN_evm.TU.Sc2ySwM_117.2140 Anthoceros agrestis HOM05D007012 ORTHO05D008882 1.7e-21 106.3 85 60.0
Migut.M00617 Erythranthe guttata HOM05D007012 ORTHO05D008882 4.3e-20 101.7 115 48.7
Glyma.08G124500 Glycine max HOM05D007012 ORTHO05D008882 1.2e-17 93.6 54 77.8
Nn3g20226 Nelumbo nucifera HOM05D007012 ORTHO05D008882 8.4e-08 60.8 123 35.8


User provided reference genes

Program Settings