Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G0176 Cannabis sativa HOM05D007302 ORTHO05D009191 6.7e-64 247.3 133 100.0
RcHm_v2.0_Chr1g0313291 Rosa chinensis HOM05D007302 ORTHO05D009191 2.7e-49 198.7 116 90.5
MD07G1001600 Malus domestica HOM05D007302 ORTHO05D009191 3.6e-49 198.4 131 81.7
Prupe.2G003100 Prunus persica HOM05D007302 ORTHO05D009191 6.1e-49 197.6 131 80.9
FAN03G0504 Fragaria x ananassa HOM05D007302 ORTHO05D009191 1.8e-48 196.1 131 80.9
AT2G44360 Arabidopsis thaliana HOM05D007302 ORTHO05D009191 2.8e-46 188.7 120 85.8
QL04p001433 Quercus lobata HOM05D007302 ORTHO05D009191 2.8e-46 188.7 123 82.1
TWI09G1618 Tripterygium wilfordii HOM05D007302 ORTHO05D009191 2.8e-46 188.7 125 81.6
TAR369G0850 Trochodendron aralioides HOM05D007302 ORTHO05D009191 3.7e-46 188.3 130 78.5
FvH4_7g00100 Fragaria vesca HOM05D007302 ORTHO05D009191 4.8e-46 188.0 109 90.8
Glyma.15G268700 Glycine max HOM05D007302 ORTHO05D009191 4.8e-46 188.0 116 83.6
Thhalv10001676m.g Eutrema salsugineum HOM05D007302 ORTHO05D009191 6.3e-46 187.6 132 79.5
TAR369G0332 Trochodendron aralioides HOM05D007302 ORTHO05D009191 8.2e-46 187.2 123 80.5
Aa31LG1G25940 Aethionema arabicum HOM05D007302 ORTHO05D009191 1.8e-45 186.0 117 86.3
Cpa.g.sc189.6 Carica papaya HOM05D007302 ORTHO05D009191 1.8e-45 186.0 117 83.8
Manes.10G151800 Manihot esculenta HOM05D007302 ORTHO05D009191 2.4e-45 185.7 125 80.8
Carub.0004s2694 Capsella rubella HOM05D007302 ORTHO05D009191 3.1e-45 185.3 120 84.2
Ciclev10033063m.g Citrus clementina HOM05D007302 ORTHO05D009191 3.1e-45 185.3 123 80.5
Potri.001G230100 Populus trichocarpa HOM05D007302 ORTHO05D009191 3.1e-45 185.3 124 79.8
Cfa010688 Carpinus fangiana HOM05D007302 ORTHO05D009191 5.3e-45 184.5 123 80.5
CsaV3_7G031460 Cucumis sativus L. HOM05D007302 ORTHO05D009191 5.3e-45 184.5 125 79.2
Sp4g26420 Schrenkiella parvula HOM05D007302 ORTHO05D009191 5.3e-45 184.5 120 84.2
Sed0011752 Sechium edule HOM05D007302 ORTHO05D009191 7.0e-45 184.1 124 78.2
Haze_03286 Corylus avellana HOM05D007302 ORTHO05D009191 9.1e-45 183.7 123 80.5
THA.LOC104817151 Tarenaya hassleriana HOM05D007302 ORTHO05D009191 9.1e-45 183.7 122 82.8
GSVIVG01001360001 Vitis vinifera HOM05D007302 ORTHO05D009191 1.5e-44 183.0 121 80.2
Medtr2g061420 Medicago truncatula HOM05D007302 ORTHO05D009191 2.0e-44 182.6 116 83.6
CARHR139520 Cardamine hirsuta HOM05D007302 ORTHO05D009191 2.6e-44 182.2 134 77.6
Eucgr.G03411 Eucalyptus grandis HOM05D007302 ORTHO05D009191 2.6e-44 182.2 120 80.8
Actinidia05847 Actinidia chinensis HOM05D007302 ORTHO05D009191 4.5e-44 181.4 139 74.8
AL4G43340 Arabidopsis lyrata HOM05D007302 ORTHO05D009191 5.9e-44 181.0 116 83.6
A04p33280 Brassica napus HOM05D007302 ORTHO05D009191 7.7e-44 180.6 129 77.5
BraA04t18789Z Brassica rapa HOM05D007302 ORTHO05D009191 7.7e-44 180.6 129 77.5
Thecc.01G416400 Theobroma cacao HOM05D007302 ORTHO05D009191 7.7e-44 180.6 124 81.5
TPR.G16161 Trifolium pratense HOM05D007302 ORTHO05D009191 7.7e-44 180.6 116 82.8
Ca_02882_v3 Cicer arietinum L. HOM05D007302 ORTHO05D009191 1.3e-43 179.9 116 81.9
Phvul.005G041100 Phaseolus vulgaris HOM05D007302 ORTHO05D009191 1.7e-43 179.5 116 79.3
Psat1g127480 Pisum sativum HOM05D007302 ORTHO05D009191 1.7e-43 179.5 116 82.8
BcaB06g29370 Brassica carinata HOM05D007302 ORTHO05D009191 2.2e-43 179.1 120 81.7
C04p70980 Brassica napus HOM05D007302 ORTHO05D009191 2.2e-43 179.1 120 81.7
BolC4t28601H Brassica oleracea HOM05D007302 ORTHO05D009191 2.2e-43 179.1 120 81.7
Atru.chr11.2701 Acer truncatum HOM05D007302 ORTHO05D009191 2.9e-43 178.7 130 77.7
DCAR_015712 Daucus carota HOM05D007302 ORTHO05D009191 2.9e-43 178.7 117 82.1
Gohir.D08G037201 Gossypium hirsutum HOM05D007302 ORTHO05D009191 3.8e-43 178.3 121 81.0
Gorai.004G035200 Gossypium raimondii HOM05D007302 ORTHO05D009191 3.8e-43 178.3 121 81.0
VMungo1080G0568 Vigna mungo HOM05D007302 ORTHO05D009191 6.5e-43 177.6 115 79.1
arahy.Tifrunner.gnm1.ann1.5U19IL Arachis hypogaea HOM05D007302 ORTHO05D009191 8.5e-43 177.2 130 73.1
ClCG09G003750 Citrullus lanatus HOM05D007302 ORTHO05D009191 1.4e-42 176.4 127 76.4
Lalb_Chr25g0283591 Lupinus albus HOM05D007302 ORTHO05D009191 1.9e-42 176.0 114 81.6
Duzib268G0295 Durio zibethinus HOM05D007302 ORTHO05D009191 2.5e-42 175.6 120 81.7
Actinidia31711 Actinidia chinensis HOM05D007302 ORTHO05D009191 3.2e-42 175.3 126 76.2
Lj6g0025867 Lotus japonicus HOM05D007302 ORTHO05D009191 3.2e-42 175.3 116 77.6
QL04p001298 Quercus lobata HOM05D007302 ORTHO05D009191 3.2e-42 175.3 147 68.7
arahy.Tifrunner.gnm1.ann1.Z7X15P Arachis hypogaea HOM05D007302 ORTHO05D009191 7.2e-42 174.1 126 74.6
Lj3g0023486 Lotus japonicus HOM05D007302 ORTHO05D009191 9.4e-42 173.7 116 76.7
MBI08_g23101_MAGBIO Magnolia biondii HOM05D007302 ORTHO05D009191 9.4e-42 173.7 131 73.3
vmacro13612 Vaccinium macrocarpon HOM05D007302 ORTHO05D009191 1.2e-41 173.3 136 72.1
MELO3C023508.2 Cucumis melo HOM05D007302 ORTHO05D009191 1.6e-41 172.9 144 68.1
Gohir.A08G026680 Gossypium hirsutum HOM05D007302 ORTHO05D009191 1.6e-41 172.9 122 77.9
FAN06G3306 Fragaria x ananassa HOM05D007302 ORTHO05D009191 1.4e-40 169.9 118 79.7
Nn2g15684 Nelumbo nucifera HOM05D007302 ORTHO05D009191 1.4e-40 169.9 115 77.4
FAN10G3108 Fragaria x ananassa HOM05D007302 ORTHO05D009191 6.7e-40 167.5 118 78.8
Lsat_1_v5_gn_1_87261 Lactuca sativa HOM05D007302 ORTHO05D009191 6.7e-40 167.5 123 75.6
CiPaw.16G067000 Carya illinoinensis HOM05D007302 ORTHO05D009191 1.1e-39 166.8 111 79.3
PSO384G4593 Papaver somniferum HOM05D007302 ORTHO05D009191 1.1e-39 166.8 121 74.4
Sopen10g014540 Solanum pennellii HOM05D007302 ORTHO05D009191 1.5e-39 166.4 119 74.8
PGSC0003DMG400028766 Solanum tuberosum HOM05D007302 ORTHO05D009191 1.5e-39 166.4 122 73.0
PSO339G0269 Papaver somniferum HOM05D007302 ORTHO05D009191 2.6e-39 165.6 121 74.4
Rhsim07G0050000 Rhododendron simsii HOM05D007302 ORTHO05D009191 4.4e-39 164.9 137 68.6
ECA248G3756 Erigeron canadensis HOM05D007302 ORTHO05D009191 1.3e-38 163.3 114 76.3
Sabra16G0137900 Salix brachista HOM05D007302 ORTHO05D009191 1.3e-38 163.3 165 59.4
Solyc10g045350.2 Solanum lycopersicum HOM05D007302 ORTHO05D009191 2.2e-38 162.5 119 73.9
MSTRG.28098 Avicennia marina HOM05D007302 ORTHO05D009191 2.8e-38 162.2 117 74.4
Actinidia25680 Actinidia chinensis HOM05D007302 ORTHO05D009191 6.3e-38 161.0 113 77.0
Sc11g0006270 Simmondsia chinensis HOM05D007302 ORTHO05D009191 8.2e-38 160.6 114 72.8
Migut.N01659 Erythranthe guttata HOM05D007302 ORTHO05D009191 1.1e-37 160.2 128 67.2
Migut.O00474 Erythranthe guttata HOM05D007302 ORTHO05D009191 1.1e-37 160.2 128 67.2
CSS0004707 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 3.1e-37 158.7 100 85.0
CSS0001542 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 4.1e-37 158.3 110 79.1
Peaxi162Scf00245g01315 Petunia axillaris HOM05D007302 ORTHO05D009191 4.1e-37 158.3 111 74.8
HanXRQChr15g0480631 Helianthus annuus HOM05D007302 ORTHO05D009191 7.0e-37 157.5 117 74.4
Aqoxy1G00038 Aquilegia oxysepala HOM05D003342 ORTHO05D003861 9.1e-37 157.1 131 67.9
Cc02_g26960 Coffea canephora HOM05D007302 ORTHO05D009191 1.2e-36 156.8 116 75.0
SalBow4G1665 Salvia bowleyana HOM05D007302 ORTHO05D009191 1.6e-36 156.4 122 70.5
SalBow4G2255 Salvia bowleyana HOM05D007302 ORTHO05D009191 1.6e-36 156.4 122 70.5
Nn7g36009 Nelumbo nucifera HOM05D007302 ORTHO05D009191 4.5e-36 154.8 128 66.4
CDE07G1496 Ceratophyllum demersum HOM05D007302 ORTHO05D009191 1.1e-34 150.2 120 63.3
Hund06578 Selenicereus undatus HOM05D007302 ORTHO05D009191 1.4e-32 143.3 124 64.5
unitig_736.g22290 Utricularia gibba HOM05D007302 ORTHO05D009191 4.0e-32 141.7 115 62.6
EL10Ac9g21938 Beta vulgaris HOM05D007302 ORTHO05D009191 1.7e-30 136.3 124 62.1
ATR0807G228 Amborella trichopoda HOM05D007302 ORTHO05D009191 2.2e-30 136.0 97 72.2
SGA_v2.0_scaffold95G28773 Striga asiatica HOM05D007302 ORTHO05D009191 2.8e-30 135.6 136 60.3
COL.COLO4_25061 Corchorus olitorius HOM05D007302 ORTHO05D009191 3.1e-29 132.1 115 70.4
Dinv43937 Davidia involucrata HOM05D007302 ORTHO05D009191 7.0e-29 131.0 126 63.5
SEGI_27997 Sequoiadendron giganteum HOM05D007302 ORTHO05D009191 9.1e-29 130.6 124 59.7
AUR62011558 Chenopodium quinoa HOM05D007302 ORTHO05D009191 1.7e-27 126.3 102 67.6
AUR62016377 Chenopodium quinoa HOM05D007302 ORTHO05D009191 8.5e-27 124.0 103 67.0
CSS0017005 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 1.1e-26 123.6 107 65.4
HPP92_022445 Vanilla planifolia HOM05D007302 ORTHO05D009191 4.2e-26 121.7 88 75.0
CSS0014571 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 6.3e-22 107.8 104 60.6
DCAR_024994 Daucus carota HOM05D007302 ORTHO05D009191 6.6e-19 97.8 95 61.1
Pp3c17_19080 Physcomitrium patens HOM05D007302 ORTHO05D009191 1.9e-18 96.3 117 46.2
Oeu003126.2 Olea europaea HOM05D007302 ORTHO05D009191 9.5e-18 94.0 66 71.2
CBR_g22319 Chara braunii HOM05D000019 ORTHO05D000048 1.0e-16 90.5 116 43.1
Os09g0553800 Oryza sativa ssp. japonica HOM05D007302 ORTHO05D009191 8.9e-16 87.4 59 74.6
Mapoly0007s0266 Marchantia polymorpha HOM05D007302 ORTHO05D009191 3.4e-15 85.5 101 48.5
MD05G1005700 Malus domestica HOM05D007302 ORTHO05D009191 4.4e-15 85.1 51 88.2
MD15G1336100 Malus domestica HOM05D007302 ORTHO05D009191 4.7e-09 65.1 55 61.8
BcaB01g03316 Brassica carinata HOM05D007302 ORTHO05D009191 2.3e-08 62.8 51 64.7


User provided reference genes

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