Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G0137 Cannabis sativa HOM05D006491 ORTHO05D008412 1.3e-227 792.7 400 100.0
Potri.018G096900 Populus trichocarpa HOM05D006491 ORTHO05D008412 1.1e-141 507.3 391 66.0
TAR383G0527 Trochodendron aralioides HOM05D006491 ORTHO05D008412 1.1e-141 507.3 401 65.1
Sabra18G0084000 Salix brachista HOM05D006491 ORTHO05D008412 1.8e-141 506.5 391 65.2
Duzib150G0568 Durio zibethinus HOM05D006491 ORTHO05D008412 7.0e-141 504.6 394 64.2
QL02p096111 Quercus lobata HOM05D006491 ORTHO05D008412 5.9e-140 501.5 375 65.3
Prupe.1G095000 Prunus persica HOM05D006491 ORTHO05D008412 1.3e-139 500.4 395 63.0
MD13G1262500 Malus domestica HOM05D006491 ORTHO05D008412 1.9e-138 496.5 391 63.9
Lalb_Chr13g0300441 Lupinus albus HOM05D006491 ORTHO05D008412 7.2e-138 494.6 397 63.2
arahy.Tifrunner.gnm1.ann1.E3AGAX Arachis hypogaea HOM05D006491 ORTHO05D008412 6.1e-137 491.5 392 65.1
CiPaw.07G187800 Carya illinoinensis HOM05D006491 ORTHO05D008412 6.1e-137 491.5 387 63.6
Dinv41291 Davidia involucrata HOM05D006491 ORTHO05D008412 1.4e-136 490.3 383 64.5
arahy.Tifrunner.gnm1.ann1.1P8XK5 Arachis hypogaea HOM05D006491 ORTHO05D008412 2.3e-136 489.6 392 64.8
Manes.14G150100 Manihot esculenta HOM05D006491 ORTHO05D008412 6.8e-136 488.0 391 62.4
Gohir.D08G096700 Gossypium hirsutum HOM05D006491 ORTHO05D008412 7.5e-135 484.6 389 61.7
Ciclev10008637m.g Citrus clementina HOM05D006491 ORTHO05D008412 9.8e-135 484.2 386 64.5
Gorai.004G103700 Gossypium raimondii HOM05D006491 ORTHO05D008412 9.8e-135 484.2 386 61.9
FAN12G3371 Fragaria x ananassa HOM05D006491 ORTHO05D008412 4.9e-134 481.9 396 61.6
Psat4g010880 Pisum sativum HOM05D006491 ORTHO05D008412 4.1e-133 478.8 388 62.6
RcHm_v2.0_Chr4g0404161 Rosa chinensis HOM05D006491 ORTHO05D008412 7.0e-133 478.0 370 63.5
COL.COLO4_16079 Corchorus olitorius HOM05D006491 ORTHO05D008412 9.2e-133 477.6 411 60.1
Medtr4g129150 Medicago truncatula HOM05D006491 ORTHO05D008412 1.6e-132 476.9 379 65.7
FAN22G1104 Fragaria x ananassa HOM05D006491 ORTHO05D008412 5.9e-132 474.9 396 60.9
Thecc.09G163600 Theobroma cacao HOM05D006491 ORTHO05D008412 7.7e-132 474.6 392 62.0
Ca_21191_v3 Cicer arietinum L. HOM05D006491 ORTHO05D008412 8.6e-131 471.1 387 63.0
Haze_22140 Corylus avellana HOM05D006491 ORTHO05D008412 1.1e-130 470.7 365 64.1
Gohir.A08G070300 Gossypium hirsutum HOM05D006491 ORTHO05D008412 4.3e-130 468.8 390 60.3
TPR.G5304 Trifolium pratense HOM05D006491 ORTHO05D008412 4.3e-130 468.8 385 60.8
GSVIVG01029103001 Vitis vinifera HOM05D006491 ORTHO05D008412 7.3e-130 468.0 390 61.8
Nn2g14424 Nelumbo nucifera HOM05D006491 ORTHO05D008412 6.1e-129 464.9 401 59.4
CSS0049223 Camellia sinensis var. sinensis HOM05D006491 ORTHO05D008412 3.0e-128 462.6 386 61.7
Lj4g0007651 Lotus japonicus HOM05D006491 ORTHO05D008412 2.6e-127 459.5 378 63.0
MBI14_g24284_MAGBIO Magnolia biondii HOM05D006491 ORTHO05D008412 2.9e-126 456.1 400 57.5
TWI63G0546 Tripterygium wilfordii HOM05D006491 ORTHO05D008412 6.4e-126 454.9 374 62.8
Phvul.003G149900 Phaseolus vulgaris HOM05D006491 ORTHO05D008412 8.3e-126 454.5 388 59.8
Actinidia17330 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.8e-125 453.4 387 60.5
Rhsim03G0262200 Rhododendron simsii HOM05D006491 ORTHO05D008412 7.0e-125 451.4 388 61.1
Sc14g0001140 Simmondsia chinensis HOM05D006491 ORTHO05D008412 1.7e-123 446.8 358 62.3
Aqoxy7G03183 Aquilegia oxysepala HOM05D006491 ORTHO05D008412 2.3e-123 446.4 403 59.3
VMungo1215G2097 Vigna mungo HOM05D006491 ORTHO05D008412 6.6e-123 444.9 364 61.8
Cpa.g.sc450.5 Carica papaya HOM05D006491 ORTHO05D008412 4.3e-122 442.2 406 57.4
PGR142G3664 Punica granatum HOM05D006491 ORTHO05D008412 6.2e-121 438.3 370 58.6
vmacro06036 Vaccinium macrocarpon HOM05D006491 ORTHO05D008412 8.0e-121 438.0 397 58.7
Atru.chr7.558 Acer truncatum HOM05D006491 ORTHO05D008412 1.2e-119 434.1 318 66.7
Glyma.17G067500 Glycine max HOM05D006491 ORTHO05D008412 2.9e-118 429.5 380 57.6
CsaV3_1G029540 Cucumis sativus L. HOM05D006491 ORTHO05D008412 1.4e-117 427.2 387 58.1
ClCG06G012970 Citrullus lanatus HOM05D006491 ORTHO05D008412 2.7e-116 422.9 390 56.9
PGSC0003DMG401027355 Solanum tuberosum HOM05D006491 ORTHO05D008412 7.8e-116 421.4 368 57.3
Cfa013536 Carpinus fangiana HOM05D006491 ORTHO05D008412 1.3e-115 420.6 283 71.0
MSTRG.10725 Avicennia marina HOM05D006491 ORTHO05D008412 2.3e-115 419.9 391 56.5
ATR0580G190 Amborella trichopoda HOM05D006491 ORTHO05D008412 3.0e-115 419.5 382 56.8
PSO063G6711 Papaver somniferum HOM05D006491 ORTHO05D008412 5.0e-115 418.7 369 58.8
MELO3C017512.2 Cucumis melo HOM05D006491 ORTHO05D008412 8.6e-115 417.9 391 57.8
EL10Ac8g18256 Beta vulgaris HOM05D006491 ORTHO05D008412 1.9e-114 416.8 381 57.5
PSO782G2884 Papaver somniferum HOM05D006491 ORTHO05D008412 1.9e-114 416.8 370 58.6
Nitab4.5_0000593g0170 Nicotiana tabacum HOM05D006491 ORTHO05D008412 5.6e-114 415.2 372 56.7
Ah.09g229650 Amaranthus hybridus HOM05D006491 ORTHO05D008412 7.3e-114 414.8 380 56.6
Nitab4.5_0003408g0120 Nicotiana tabacum HOM05D006491 ORTHO05D008412 1.6e-113 413.7 372 56.5
Solyc11g007750.3 Solanum lycopersicum HOM05D006491 ORTHO05D008412 2.8e-113 412.9 368 56.5
Oeu043515.2 Olea europaea HOM05D006491 ORTHO05D008412 4.7e-113 412.1 450 50.4
Sopen11g003610 Solanum pennellii HOM05D006491 ORTHO05D008412 4.7e-113 412.1 366 56.6
CAN.G135.50 Capsicum annuum HOM05D006491 ORTHO05D008412 2.0e-111 406.8 369 57.5
THA.LOC104817809 Tarenaya hassleriana HOM05D006491 ORTHO05D008412 1.1e-109 401.0 362 56.9
FAN07G0899 Fragaria x ananassa HOM05D006491 ORTHO05D008412 5.4e-109 398.7 396 55.3
Migut.K00266 Erythranthe guttata HOM05D006491 ORTHO05D008412 1.6e-108 397.1 382 58.4
Os09g0428900 Oryza sativa ssp. japonica HOM05D006491 ORTHO05D008412 5.1e-107 392.1 392 53.1
HanXRQChr05g0136551 Helianthus annuus HOM05D006491 ORTHO05D008412 8.6e-107 391.3 374 54.3
Carub.0007s1278 Capsella rubella HOM05D006491 ORTHO05D008412 1.1e-106 391.0 378 52.1
Thhalv10025588m.g Eutrema salsugineum HOM05D006491 ORTHO05D008412 9.5e-106 387.9 379 53.3
AL7G24610 Arabidopsis lyrata HOM05D006491 ORTHO05D008412 1.6e-105 387.1 381 52.0
Cc06_g13780 Coffea canephora HOM05D006491 ORTHO05D008412 1.6e-105 387.1 379 53.6
unitig_62.g23494 Utricularia gibba HOM05D006491 ORTHO05D008412 2.8e-105 386.3 345 57.7
Aa31LG3G170 Aethionema arabicum HOM05D006491 ORTHO05D008412 6.2e-105 385.2 379 53.3
BolC8t48733H Brassica oleracea HOM05D006491 ORTHO05D008412 6.2e-105 385.2 349 55.6
BcaC07g38308 Brassica carinata HOM05D006491 ORTHO05D008412 1.8e-104 383.6 349 55.3
C08p10580 Brassica napus HOM05D006491 ORTHO05D008412 2.3e-104 383.3 349 55.3
Eucgr.C00197 Eucalyptus grandis HOM05D006491 ORTHO05D008412 3.1e-104 382.9 299 62.2
BraA08t33984Z Brassica rapa HOM05D006491 ORTHO05D008412 5.2e-104 382.1 367 54.0
ECA236G3989 Erigeron canadensis HOM05D006491 ORTHO05D008412 8.9e-104 381.3 376 55.1
A08p20250 Brassica napus HOM05D006491 ORTHO05D008412 2.0e-103 380.2 369 53.4
Zm00001eb313540 Zea mays HOM05D006491 ORTHO05D008412 2.6e-103 379.8 371 53.1
CARHR235700 Cardamine hirsuta HOM05D006491 ORTHO05D008412 2.2e-102 376.7 378 52.4
BcaB03g12553 Brassica carinata HOM05D006491 ORTHO05D008412 3.7e-102 375.9 334 56.0
Lsat_1_v5_gn_8_65441 Lactuca sativa HOM05D006491 ORTHO05D008412 1.9e-101 373.6 382 52.9
Sp7g25960 Schrenkiella parvula HOM05D006491 ORTHO05D008412 4.1e-101 372.5 375 51.2
Hund26385 Selenicereus undatus HOM05D006491 ORTHO05D008412 1.7e-99 367.1 392 53.3
Peaxi162Scf00113g00085 Petunia axillaris HOM05D006491 ORTHO05D008412 8.6e-99 364.8 281 61.2
AUR62040289 Chenopodium quinoa HOM05D006491 ORTHO05D008412 1.6e-97 360.5 361 53.5
AUR62039980 Chenopodium quinoa HOM05D006491 ORTHO05D008412 3.1e-96 356.3 361 52.9
Pp3c9_21480 Physcomitrium patens HOM05D006491 ORTHO05D008412 4.4e-95 352.4 424 48.3
Actinidia17333 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.7e-94 350.5 281 63.3
Sed0015960 Sechium edule HOM05D006491 ORTHO05D008412 2.9e-94 349.7 285 59.6
Glyma.13G093000 Glycine max HOM05D006491 ORTHO05D008412 2.4e-93 346.7 255 66.3
FvH4_4g08360 Fragaria vesca HOM05D006491 ORTHO05D008412 2.1e-92 343.6 247 68.8
AT4G28020 Arabidopsis thaliana HOM05D006491 ORTHO05D008412 7.8e-92 341.7 287 55.7
Hma1.2p1_0921F.1_g236670 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 9.0e-88 328.2 318 55.7
AagrBONN_evm.TU.Sc2ySwM_344.1093 Anthoceros agrestis HOM05D006491 ORTHO05D008412 2.9e-86 323.2 382 47.4
SMO358G0273 Selaginella moellendorffii HOM05D006491 ORTHO05D008412 3.5e-84 316.2 368 50.0
DCAR_017948 Daucus carota HOM05D006491 ORTHO05D008412 5.1e-83 312.4 250 64.4
Actinidia14076 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.3e-81 307.8 246 63.8
Mapoly0045s0079 Marchantia polymorpha HOM05D006491 ORTHO05D008412 3.1e-80 303.1 320 49.4
Actinidia25168 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.1e-77 294.7 182 73.1
CDE05G0295 Ceratophyllum demersum HOM05D006491 ORTHO05D008412 1.9e-77 293.9 306 50.7
Lj9A730G48 Lonicera japonica HOM05D006491 ORTHO05D008412 1.5e-74 284.3 172 73.3
SGA_v2.0_scaffold242G44263 Striga asiatica HOM05D006491 ORTHO05D008412 2.5e-74 283.5 297 51.9
Peaxi162Scf00532g00051 Petunia axillaris HOM05D006491 ORTHO05D008412 5.5e-69 265.8 342 45.0
Cre14.g613450 Chlamydomonas reinhardtii HOM05D006491 ORTHO05D008412 6.1e-52 209.1 299 40.8
arahy.Tifrunner.gnm1.ann1.6S8GSB Arachis hypogaea HOM05D006491 ORTHO05D008412 5.1e-51 206.1 198 59.6
SEGI_13660 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 1.4e-45 188.0 117 70.9
MCO01G751 Micromonas commoda HOM05D006491 ORTHO05D008412 1.8e-43 181.0 267 41.2
MELO3C026731.2 Cucumis melo HOM05D006491 ORTHO05D008412 4.5e-39 166.4 141 61.7
PRCOL_00001913 Prasinoderma coloniale HOM05D006491 ORTHO05D008412 1.1e-37 161.8 274 41.2
MCO14G289 Micromonas commoda HOM05D006491 ORTHO05D008412 6.7e-35 152.5 155 51.6
SEGI_21199 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 8.2e-33 145.6 207 42.0
SGA_v2.0_scaffold242G44258 Striga asiatica HOM05D006491 ORTHO05D008412 3.5e-23 113.6 71 71.8
Duzib168G0391 Durio zibethinus HOM05D006491 ORTHO05D008412 1.5e-21 108.2 117 49.6
GSVIVG01029402001 Vitis vinifera HOM05D006491 ORTHO05D008412 2.9e-09 67.4 55 60.0
Hma1.2p1_1576F.1_g291650 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 8.3e-09 65.9 51 52.9


User provided reference genes

Program Settings