Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G0110 Cannabis sativa HOM05D009267 ORTHO05D010384 8.9e-162 573.5 290 100.0
CANSAT25G2360 Cannabis sativa HOM05D009267 ORTHO05D010384 1.2e-113 413.7 260 83.8
CANSAT21G1209 Cannabis sativa HOM05D009267 ORTHO05D010384 1.2e-76 290.8 150 96.0
CANSAT35G1516 Cannabis sativa HOM05D009267 ORTHO05D010384 4.3e-55 219.2 109 99.1
CANSAT01G2441 Cannabis sativa HOM05D009267 ORTHO05D010384 1.8e-50 203.8 144 75.7
CiPaw.01G012000 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.4e-45 187.6 261 42.5
CiPaw.01G054700 Carya illinoinensis HOM05D009267 ORTHO05D010384 8.9e-29 131.7 209 36.4
Actinidia03272 Actinidia chinensis HOM05D006612 ORTHO05D010619 1.4e-26 124.4 235 33.2
Dinv05943 Davidia involucrata HOM05D006612 ORTHO05D010619 1.4e-26 124.4 217 33.6
Oeu058530.1 Olea europaea HOM05D008860 ORTHO05D010619 3.2e-26 123.2 251 31.5
CANSAT56G0625 Cannabis sativa HOM05D008860 ORTHO05D010619 3.5e-25 119.8 222 32.0
CANSAT80G1395 Cannabis sativa HOM05D008860 ORTHO05D010619 6.6e-24 115.5 236 30.1
Dinv08482 Davidia involucrata HOM05D000824 ORTHO05D010619 4.3e-23 112.8 217 31.3
Dinv26739 Davidia involucrata HOM05D000824 ORTHO05D010384 5.6e-23 112.5 254 31.1
CANSAT01G1154 Cannabis sativa HOM05D000824 ORTHO05D010619 1.6e-22 110.9 206 30.6
Dinv08250 Davidia involucrata HOM05D000824 ORTHO05D010384 1.6e-22 110.9 230 31.3
CiPaw.15G116600 Carya illinoinensis HOM05D000096 ORTHO05D010384 2.1e-22 110.5 169 36.1
CSS0028456 Camellia sinensis var. sinensis HOM05D002261 ORTHO05D002334 1.1e-21 108.2 217 28.1
Dinv10520 Davidia involucrata HOM05D000824 ORTHO05D010384 2.4e-21 107.1 194 32.0
CANSAT78G1911 Cannabis sativa HOM05D000096 ORTHO05D010619 5.2e-21 105.9 256 28.5
Atru.chr3.2966 Acer truncatum HOM05D008860 ORTHO05D010619 2.2e-19 100.5 209 31.6
Hma1.2p1_0500F.1_g166880 Hydrangea macrophylla HOM05D009267 ORTHO05D010384 8.4e-19 98.6 170 34.7
CANSAT54G0134 Cannabis sativa HOM05D009267 ORTHO05D010384 1.4e-18 97.8 111 47.7
Oeu029240.1 Olea europaea HOM05D008860 ORTHO05D010619 5.4e-18 95.9 221 29.4
Oeu039609.1 Olea europaea HOM05D008860 ORTHO05D010619 1.6e-17 94.4 140 37.1
Atru.chr4.2122 Acer truncatum HOM05D002751 ORTHO05D003005 2.1e-17 94.0 248 28.2
EL10Ac6g15055 Beta vulgaris HOM05D000096 ORTHO05D000045 2.7e-17 93.6 211 29.4
EL10Ac1g02309 Beta vulgaris HOM05D003315 ORTHO05D003407 6.0e-17 92.4 212 30.7
EL10Ac8g19549 Beta vulgaris HOM05D000096 ORTHO05D000045 6.6e-16 89.0 240 27.9
Oeu013093.1 Olea europaea HOM05D019936 ORTHO05D010619 1.9e-15 87.4 241 27.0
Cc07_g18580 Coffea canephora HOM05D006612 ORTHO05D009014 1.3e-14 84.7 210 29.5
CiPaw.09G042900 Carya illinoinensis HOM05D009267 ORTHO05D010384 1.6e-14 84.3 135 34.8
CiPaw.15G057000 Carya illinoinensis HOM05D009267 ORTHO05D010384 2.8e-14 83.6 135 34.8
PGSC0003DMG400001679 Solanum tuberosum HOM05D002261 ORTHO05D002334 3.6e-14 83.2 259 26.6
CiPaw.15G013500 Carya illinoinensis HOM05D009267 ORTHO05D010384 6.2e-14 82.4 135 34.1
CiPaw.07G195700 Carya illinoinensis HOM05D009267 ORTHO05D010384 8.1e-14 82.0 135 34.8
CANSAT01G2695 Cannabis sativa HOM05D008860 ORTHO05D010384 1.1e-13 81.6 175 28.6
Dinv19531 Davidia involucrata HOM05D000824 ORTHO05D010384 1.8e-13 80.9 196 28.6
Lsat_1_v5_gn_2_22101 Lactuca sativa HOM05D006612 ORTHO05D009014 1.8e-13 80.9 217 27.2
Dinv36352 Davidia involucrata HOM05D009267 ORTHO05D000302 4.0e-13 79.7 208 24.5
Dinv41987 Davidia involucrata HOM05D000824 ORTHO05D010384 5.3e-13 79.3 195 27.7
Cc01_g08100 Coffea canephora HOM05D000096 ORTHO05D000045 6.9e-13 79.0 218 25.2
Dinv30925 Davidia involucrata HOM05D000824 ORTHO05D010384 6.9e-13 79.0 195 27.7
Rhsim08G0049800 Rhododendron simsii HOM05D023805 ORTHO05D010384 1.2e-12 78.2 173 30.6
vmacro17288 Vaccinium macrocarpon HOM05D008860 ORTHO05D010619 1.2e-12 78.2 212 26.4
Peaxi162Scf00677g10012 Petunia axillaris HOM05D002261 ORTHO05D002334 5.8e-12 75.9 210 27.1
Atru.chr12.1651 Acer truncatum HOM05D000096 ORTHO05D000045 7.6e-12 75.5 201 29.4
Rhsim06G0109600 Rhododendron simsii HOM05D002224 ORTHO05D002334 7.6e-12 75.5 178 26.4
Peaxi162Scf00111g00518 Petunia axillaris HOM05D002261 ORTHO05D002334 1.7e-11 74.3 225 27.6
Peaxi162Scf00363g00012 Petunia axillaris HOM05D002261 ORTHO05D002334 2.2e-11 73.9 210 26.7
Peaxi162Scf00565g00829 Petunia axillaris HOM05D002261 ORTHO05D002334 2.2e-11 73.9 235 26.4
Sopen10g004570 Solanum pennellii HOM05D002261 ORTHO05D002334 2.2e-11 73.9 207 29.0
Peaxi162Scf00175g00342 Petunia axillaris HOM05D002261 ORTHO05D002334 2.9e-11 73.6 205 31.2
Dinv35503 Davidia involucrata HOM05D015775 ORTHO05D010384 3.8e-11 73.2 166 31.3
AUR62018076 Chenopodium quinoa HOM05D003315 ORTHO05D003407 4.9e-11 72.8 225 22.7
Oeu058483.1 Olea europaea HOM05D008860 ORTHO05D010619 4.9e-11 72.8 178 27.0
PGSC0003DMG400009893 Solanum tuberosum HOM05D002261 ORTHO05D002334 6.4e-11 72.4 226 26.5
TAR091G0002 Trochodendron aralioides HOM05D000824 ORTHO05D000001 6.4e-11 72.4 218 25.7
EL10Ac7g18197 Beta vulgaris HOM05D003315 ORTHO05D003407 8.4e-11 72.0 220 23.2
Nitab4.5_0002588g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 8.4e-11 72.0 205 25.9
Nitab4.5_0006835g0020 Nicotiana tabacum HOM05D002261 ORTHO05D002334 8.4e-11 72.0 262 25.2
TAR063G0004 Trochodendron aralioides HOM05D000824 ORTHO05D010357 8.4e-11 72.0 218 25.7
Peaxi162Scf00357g00621 Petunia axillaris HOM05D002261 ORTHO05D002334 2.4e-10 70.5 216 26.4
PSO478G2603 Papaver somniferum HOM05D000824 ORTHO05D003555 3.2e-10 70.1 209 26.8
Oeu057576.1 Olea europaea HOM05D008860 ORTHO05D010619 4.2e-10 69.7 125 29.6
Peaxi162Scf00308g00076 Petunia axillaris HOM05D002261 ORTHO05D002334 4.2e-10 69.7 217 28.6
PSO017G4603 Papaver somniferum HOM05D000824 ORTHO05D003555 5.4e-10 69.3 209 26.8
Peaxi162Scf00809g00418 Petunia axillaris HOM05D002261 ORTHO05D002334 7.1e-10 68.9 256 25.8
Hma1.2p1_2379F.1_g320940 Hydrangea macrophylla HOM05D009267 ORTHO05D010619 9.3e-10 68.6 102 39.2
Peaxi162Scf03993g00002 Petunia axillaris HOM05D002261 ORTHO05D002334 2.1e-09 67.4 172 29.1
Cc07_g15780 Coffea canephora HOM05D006612 ORTHO05D009014 2.7e-09 67.0 126 32.5
Oeu026609.1 Olea europaea HOM05D008860 ORTHO05D010619 2.7e-09 67.0 148 31.1
AUR62042683 Chenopodium quinoa HOM05D003315 ORTHO05D003407 3.5e-09 66.6 213 23.0
Dinv03710 Davidia involucrata HOM05D015775 ORTHO05D010384 3.5e-09 66.6 128 32.8
PGSC0003DMG401021841 Solanum tuberosum HOM05D002261 ORTHO05D002334 4.6e-09 66.2 241 24.9
vmacro23315 Vaccinium macrocarpon HOM05D008336 ORTHO05D011831 4.6e-09 66.2 222 22.5
Oeu030897.1 Olea europaea HOM05D008860 ORTHO05D010619 6.0e-09 65.9 160 28.8
Peaxi162Scf00047g00443 Petunia axillaris HOM05D002261 ORTHO05D002334 6.0e-09 65.9 111 37.8
Peaxi162Scf00334g00041 Petunia axillaris HOM05D002327 ORTHO05D002306 6.0e-09 65.9 226 24.3
Rhsim08G0044600 Rhododendron simsii HOM05D008336 ORTHO05D011520 6.0e-09 65.9 191 26.7
EL10Ac5g11732 Beta vulgaris HOM05D000096 ORTHO05D000045 7.9e-09 65.5 212 21.7
SGA_v2.0_scaffold289G47248 Striga asiatica HOM05D006612 ORTHO05D009014 7.9e-09 65.5 220 25.5
AUR62008720 Chenopodium quinoa HOM05D003315 ORTHO05D003407 1.0e-08 65.1 184 21.7
AUR62041240 Chenopodium quinoa HOM05D003315 ORTHO05D003407 1.0e-08 65.1 184 21.7
Peaxi162Scf00053g00910 Petunia axillaris HOM05D002327 ORTHO05D002306 1.0e-08 65.1 226 25.7
Peaxi162Scf00158g00318 Petunia axillaris HOM05D002261 ORTHO05D002334 1.0e-08 65.1 106 35.8
Sopen07g011000 Solanum pennellii HOM05D000004 ORTHO05D002334 1.0e-08 65.1 164 31.7
EL10Ac4g07888 Beta vulgaris HOM05D003315 ORTHO05D003407 1.3e-08 64.7 205 23.4
Peaxi162Scf00248g00213 Petunia axillaris HOM05D002327 ORTHO05D002306 1.3e-08 64.7 226 23.9
EL10Ac4g07893 Beta vulgaris HOM05D003315 ORTHO05D003407 1.8e-08 64.3 194 23.2
AUR62041084 Chenopodium quinoa HOM05D003315 ORTHO05D003407 1.8e-08 64.3 240 25.4
Nitab4.5_0005054g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.8e-08 64.3 189 24.9
Peaxi162Scf01253g00018 Petunia axillaris HOM05D002261 ORTHO05D002334 2.3e-08 63.9 106 34.0
AUR62013558 Chenopodium quinoa HOM05D003315 ORTHO05D003407 3.0e-08 63.5 221 24.4
AUR62028024 Chenopodium quinoa HOM05D003315 ORTHO05D003407 3.0e-08 63.5 161 27.3
Dinv07358 Davidia involucrata HOM05D015775 ORTHO05D010384 3.0e-08 63.5 169 30.8
Peaxi162Scf00098g01535 Petunia axillaris HOM05D002261 ORTHO05D002334 3.0e-08 63.5 107 35.5
Nitab4.5_0000877g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.9e-08 63.2 208 23.1
AUR62032045 Chenopodium quinoa HOM05D003315 ORTHO05D003407 5.1e-08 62.8 186 25.8
PGSC0003DMG400020694 Solanum tuberosum HOM05D002261 ORTHO05D002334 5.1e-08 62.8 177 27.7
Peaxi162Scf01365g00039 Petunia axillaris HOM05D002327 ORTHO05D002306 6.7e-08 62.4 227 23.8
Aqoxy3G03684 Aquilegia oxysepala HOM05D000824 ORTHO05D003555 8.7e-08 62.0 217 25.3
AUR62019789 Chenopodium quinoa HOM05D003315 ORTHO05D003407 8.7e-08 62.0 184 27.7
Rhsim03G0120000 Rhododendron simsii HOM05D008336 ORTHO05D011520 8.7e-08 62.0 104 34.6
AUR62008792 Chenopodium quinoa HOM05D003315 ORTHO05D003407 1.1e-07 61.6 186 25.8
AUR62008794 Chenopodium quinoa HOM05D003315 ORTHO05D003407 1.1e-07 61.6 186 25.8
AUR62037123 Chenopodium quinoa HOM05D003315 ORTHO05D003407 1.1e-07 61.6 123 25.2
Peaxi162Scf00271g00110 Petunia axillaris HOM05D002327 ORTHO05D002306 1.5e-07 61.2 233 24.9
QL01p028236 Quercus lobata HOM05D009267 ORTHO05D010384 1.5e-07 61.2 101 33.7
PGSC0003DMG401024222 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.5e-07 61.2 192 25.5
Nitab4.5_0000754g0300 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.9e-07 60.8 112 34.8
Sopen04g013910 Solanum pennellii HOM05D002261 ORTHO05D002334 1.9e-07 60.8 199 26.1
Sopen11g020370 Solanum pennellii HOM05D002261 ORTHO05D002334 1.9e-07 60.8 205 25.9
AUR62034257 Chenopodium quinoa HOM05D003315 ORTHO05D003407 2.5e-07 60.5 219 21.0
AUR62041865 Chenopodium quinoa HOM05D003315 ORTHO05D003407 3.3e-07 60.1 174 27.0
AUR62041866 Chenopodium quinoa HOM05D003315 ORTHO05D003407 3.3e-07 60.1 174 27.0
Nitab4.5_0001568g0120 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.3e-07 60.1 167 25.1
Nitab4.5_0004247g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.3e-07 60.1 194 23.7
CiPaw.01G182600 Carya illinoinensis HOM05D000096 ORTHO05D000045 4.3e-07 59.7 83 37.3
Nitab4.5_0011868g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.3e-07 59.7 116 31.9
AUR62003621 Chenopodium quinoa HOM05D003315 ORTHO05D003407 5.6e-07 59.3 222 25.2
Nitab4.5_0009613g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 5.6e-07 59.3 205 25.4
Peaxi162Scf00164g00088 Petunia axillaris HOM05D002261 ORTHO05D002334 5.6e-07 59.3 204 27.0
AUR62030527 Chenopodium quinoa HOM05D003315 ORTHO05D003407 7.4e-07 58.9 233 23.2
Nitab4.5_0011586g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 7.4e-07 58.9 111 33.3
Peaxi162Scf00028g00075 Petunia axillaris HOM05D002261 ORTHO05D002334 9.6e-07 58.5 109 34.9
Sopen03g007870 Solanum pennellii HOM05D002261 ORTHO05D002334 1.3e-06 58.2 205 25.4
SGA_v2.0_scaffold19G08816 Striga asiatica HOM05D006612 ORTHO05D009014 1.3e-06 58.2 218 23.9
CAN.G280.21 Capsicum annuum HOM05D002261 ORTHO05D002334 2.1e-06 57.4 91 34.1
Nitab4.5_0000113g0330 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.1e-06 57.4 175 26.3
Peaxi162Scf00351g00326 Petunia axillaris HOM05D002327 ORTHO05D002306 2.8e-06 57.0 226 23.0
Peaxi162Scf00611g00127 Petunia axillaris HOM05D002327 ORTHO05D002306 2.8e-06 57.0 228 23.7
CAN.G619.1 Capsicum annuum HOM05D002261 ORTHO05D002334 3.7e-06 56.6 125 29.6
Peaxi162Scf00013g03332 Petunia axillaris HOM05D002327 ORTHO05D002306 3.7e-06 56.6 225 22.7
Peaxi162Scf00096g01841 Petunia axillaris HOM05D002327 ORTHO05D002306 3.7e-06 56.6 186 25.3
Peaxi162Scf01481g00035 Petunia axillaris HOM05D002327 ORTHO05D002306 4.8e-06 56.2 228 23.7
vmacro10190 Vaccinium macrocarpon HOM05D008336 ORTHO05D011831 4.8e-06 56.2 202 23.3
vmacro23524 Vaccinium macrocarpon HOM05D008336 ORTHO05D011831 4.8e-06 56.2 202 23.3
Solyc11g013730.3 Solanum lycopersicum HOM05D002261 ORTHO05D002334 6.2e-06 55.8 175 25.7
Peaxi162Scf00206g00046 Petunia axillaris HOM05D002261 ORTHO05D002334 8.1e-06 55.5 134 33.6
Peaxi162Scf00371g00312 Petunia axillaris HOM05D002261 ORTHO05D002334 8.1e-06 55.5 108 32.4
Peaxi162Scf00582g00016 Petunia axillaris HOM05D002261 ORTHO05D002334 8.1e-06 55.5 63 42.9
PGSC0003DMG400001258 Solanum tuberosum HOM05D002261 ORTHO05D002334 8.1e-06 55.5 295 23.7


User provided reference genes

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