Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G0094 Cannabis sativa HOM05D005954 ORTHO05D007347 3.8e-77 291.6 163 100.0
Gohir.A05G156000 Gossypium hirsutum HOM05D005954 ORTHO05D007347 1.7e-45 186.4 161 70.2
Gorai.009G163700 Gossypium raimondii HOM05D005954 ORTHO05D007347 5.0e-45 184.9 161 69.6
Gohir.D05G158700 Gossypium hirsutum HOM05D005954 ORTHO05D007347 8.5e-45 184.1 161 68.9
Thecc.06G173000 Theobroma cacao HOM05D005954 ORTHO05D007347 8.5e-45 184.1 163 68.7
Duzib160G0806 Durio zibethinus HOM05D005954 ORTHO05D007347 7.2e-44 181.0 161 70.2
MELO3C007218.2 Cucumis melo HOM05D005954 ORTHO05D007347 2.7e-43 179.1 163 68.7
CsaV3_6G050830 Cucumis sativus L. HOM05D005954 ORTHO05D007347 3.6e-43 178.7 163 68.7
Haze_06257 Corylus avellana HOM05D005954 ORTHO05D007347 6.1e-43 177.9 165 68.5
ClCG01G023670 Citrullus lanatus HOM05D005954 ORTHO05D007347 8.0e-43 177.6 163 69.3
FAN21G0082 Fragaria x ananassa HOM05D005954 ORTHO05D007347 1.4e-42 176.8 163 68.7
FvH4_3g07980 Fragaria vesca HOM05D005954 ORTHO05D007347 3.0e-42 175.6 163 68.1
FAN16G0914 Fragaria x ananassa HOM05D005954 ORTHO05D007347 3.0e-42 175.6 163 68.1
Potri.011G064800 Populus trichocarpa HOM05D005954 ORTHO05D007347 3.0e-42 175.6 161 68.3
FAN11G0799 Fragaria x ananassa HOM05D005954 ORTHO05D007347 4.4e-41 171.8 163 67.5
RcHm_v2.0_Chr5g0010351 Rosa chinensis HOM05D005954 ORTHO05D007347 9.7e-41 170.6 163 66.3
Gohir.D06G136500 Gossypium hirsutum HOM05D005954 ORTHO05D007347 6.3e-40 167.9 161 66.5
Gorai.010G158700 Gossypium raimondii HOM05D005954 ORTHO05D007347 6.3e-40 167.9 161 66.5
Prupe.4G059500 Prunus persica HOM05D005954 ORTHO05D007347 8.3e-40 167.5 165 66.7
Manes.17G054200 Manihot esculenta HOM05D005954 ORTHO05D007347 1.4e-39 166.8 163 62.6
MD10G1282300 Malus domestica HOM05D005954 ORTHO05D007347 1.2e-38 163.7 163 65.0
Gohir.A06G134004 Gossypium hirsutum HOM05D005954 ORTHO05D007347 1.6e-38 163.3 161 66.5
Cpa.g.sc7.59 Carica papaya HOM05D005954 ORTHO05D007347 3.8e-37 158.7 167 64.1
Sed0006910 Sechium edule HOM05D005954 ORTHO05D007347 5.0e-37 158.3 164 65.9
PSO541G3988 Papaver somniferum HOM05D005954 ORTHO05D007347 1.9e-36 156.4 159 64.2
QL05p046336 Quercus lobata HOM05D005954 ORTHO05D007347 2.5e-36 156.0 169 63.3
Dinv04624 Davidia involucrata HOM05D005954 ORTHO05D007347 4.2e-36 155.2 160 62.5
TAR626G1287 Trochodendron aralioides HOM05D005954 ORTHO05D007347 4.2e-36 155.2 164 65.9
Cfa000593 Carpinus fangiana HOM05D005954 ORTHO05D007347 9.4e-36 154.1 165 61.8
TWI38G2142 Tripterygium wilfordii HOM05D005954 ORTHO05D007347 9.4e-36 154.1 161 61.5
Ciclev10017015m.g Citrus clementina HOM05D005954 ORTHO05D007347 1.2e-35 153.7 169 61.5
PSO675G5672 Papaver somniferum HOM05D005954 ORTHO05D007347 1.2e-35 153.7 159 62.9
Manes.16G037400 Manihot esculenta HOM05D005954 ORTHO05D007347 3.6e-35 152.1 163 62.0
Sabra11G0046600 Salix brachista HOM05D005954 ORTHO05D007347 4.7e-35 151.8 196 55.1
Nn1g09054 Nelumbo nucifera HOM05D005954 ORTHO05D007347 8.0e-35 151.0 163 63.8
Glyma.13G230600 Glycine max HOM05D005954 ORTHO05D007347 1.8e-34 149.8 143 67.8
MD05G1303200 Malus domestica HOM05D005954 ORTHO05D007347 3.0e-34 149.1 163 62.6
Phvul.006G176900 Phaseolus vulgaris HOM05D005954 ORTHO05D007347 4.0e-34 148.7 143 63.6
Phvul.006G176980 Phaseolus vulgaris HOM05D005954 ORTHO05D007347 4.0e-34 148.7 143 63.6
Atru.chr10.1690 Acer truncatum HOM05D005954 ORTHO05D007347 6.8e-34 147.9 163 62.6
arahy.Tifrunner.gnm1.ann1.N07IEU Arachis hypogaea HOM05D005954 ORTHO05D007347 7.5e-33 144.4 161 61.5
Glyma.15G082000 Glycine max HOM05D005954 ORTHO05D007347 1.3e-32 143.7 139 66.9
PGR004G0539 Punica granatum HOM05D005954 ORTHO05D007347 1.7e-32 143.3 164 61.0
PGR004G0737 Punica granatum HOM05D005954 ORTHO05D007347 1.7e-32 143.3 164 61.0
GSVIVG01021193001 Vitis vinifera HOM05D005954 ORTHO05D007347 2.2e-32 142.9 119 72.3
MSTRG.14726 Avicennia marina HOM05D005954 ORTHO05D007347 3.7e-32 142.1 159 58.5
Lj6g0020578 Lotus japonicus HOM05D005954 ORTHO05D007347 3.7e-32 142.1 163 61.3
CiPaw.09G068600 Carya illinoinensis HOM05D005954 ORTHO05D007347 4.8e-32 141.7 166 60.2
CSS0014251 Camellia sinensis var. sinensis HOM05D005954 ORTHO05D007347 1.8e-31 139.8 162 58.6
AUR62036591 Chenopodium quinoa HOM05D005954 ORTHO05D007347 1.8e-31 139.8 162 59.9
Solyc01g056780.3 Solanum lycopersicum HOM05D005954 ORTHO05D007347 4.1e-31 138.7 164 57.9
Thhalv10008967m.g Eutrema salsugineum HOM05D005954 ORTHO05D007347 5.4e-31 138.3 169 59.2
AL1G42790 Arabidopsis lyrata HOM05D005954 ORTHO05D007347 7.0e-31 137.9 170 60.6
THA.LOC104820590 Tarenaya hassleriana HOM05D005954 ORTHO05D007347 9.1e-31 137.5 172 61.0
MD16G1032000 Malus domestica HOM05D005954 ORTHO05D007347 1.2e-30 137.1 163 56.4
Ah.09g233660 Amaranthus hybridus HOM05D005954 ORTHO05D007347 2.0e-30 136.3 140 65.7
arahy.Tifrunner.gnm1.ann1.YBYE48 Arachis hypogaea HOM05D005954 ORTHO05D007347 2.7e-30 136.0 161 60.9
BcaNung06433 Brassica carinata HOM05D005954 ORTHO05D007347 2.7e-30 136.0 164 59.1
A08p25330 Brassica napus HOM05D005954 ORTHO05D007347 2.7e-30 136.0 165 59.4
BraA08t34485Z Brassica rapa HOM05D005954 ORTHO05D007347 2.7e-30 136.0 165 59.4
Peaxi162Scf00061g00155 Petunia axillaris HOM05D005954 ORTHO05D007347 2.7e-30 136.0 141 62.4
Aqoxy1G03187 Aquilegia oxysepala HOM05D005954 ORTHO05D007347 3.5e-30 135.6 157 59.2
AUR62031174 Chenopodium quinoa HOM05D005954 ORTHO05D007347 3.5e-30 135.6 140 65.0
Migut.H01450 Erythranthe guttata HOM05D005954 ORTHO05D007347 3.5e-30 135.6 160 56.2
Sp1g25010 Schrenkiella parvula HOM05D005954 ORTHO05D007347 3.5e-30 135.6 169 59.8
A09p37340 Brassica napus HOM05D005954 ORTHO05D007347 4.5e-30 135.2 147 64.6
C03p75510 Brassica napus HOM05D005954 ORTHO05D007347 4.5e-30 135.2 165 58.8
BraA09t39243Z Brassica rapa HOM05D005954 ORTHO05D007347 4.5e-30 135.2 147 64.6
BcaB07g32486 Brassica carinata HOM05D005954 ORTHO05D007347 7.7e-30 134.4 147 63.3
C07p16610 Brassica napus HOM05D005954 ORTHO05D007347 7.7e-30 134.4 160 60.0
BolC3t19807H Brassica oleracea HOM05D005954 ORTHO05D007347 1.3e-29 133.7 167 57.5
Cc02_g14660 Coffea canephora HOM05D005954 ORTHO05D007347 1.7e-29 133.3 167 58.7
TPR.G11659 Trifolium pratense HOM05D005954 ORTHO05D007347 1.7e-29 133.3 160 56.9
BcaNung06755 Brassica carinata HOM05D005954 ORTHO05D007347 2.3e-29 132.9 165 58.8
Carub.0001s2727 Capsella rubella HOM05D005954 ORTHO05D007347 2.9e-29 132.5 169 58.6
Lsat_1_v5_gn_7_23061 Lactuca sativa HOM05D005954 ORTHO05D007347 2.9e-29 132.5 145 63.4
AT1G29070 Arabidopsis thaliana HOM05D005954 ORTHO05D007347 6.6e-29 131.3 170 58.8
Nitab4.5_0004274g0040 Nicotiana tabacum HOM05D005954 ORTHO05D007347 6.6e-29 131.3 144 61.1
SalBow8G3893 Salvia bowleyana HOM05D005954 ORTHO05D007347 6.6e-29 131.3 151 58.9
Aa31LG5G21180 Aethionema arabicum HOM05D005954 ORTHO05D007347 8.6e-29 131.0 172 57.6
PGSC0003DMG400021493 Solanum tuberosum HOM05D005954 ORTHO05D007347 8.6e-29 131.0 164 56.7
SGA_v2.0_scaffold1G00032 Striga asiatica HOM05D005954 ORTHO05D007347 1.1e-28 130.6 147 59.9
Nitab4.5_0000117g0150 Nicotiana tabacum HOM05D005954 ORTHO05D007347 1.5e-28 130.2 144 61.1
Medtr2g015790 Medicago truncatula HOM05D005954 ORTHO05D007347 1.9e-28 129.8 160 56.9
Eucgr.D00519 Eucalyptus grandis HOM05D005954 ORTHO05D007347 2.5e-28 129.4 163 57.7
MD10G1067400 Malus domestica HOM05D005954 ORTHO05D007347 2.5e-28 129.4 152 57.2
EL10Ac8g20509 Beta vulgaris HOM05D005954 ORTHO05D007347 4.2e-28 128.6 162 58.6
BcaC05g26922 Brassica carinata HOM05D005954 ORTHO05D007347 4.2e-28 128.6 142 65.5
C05p27750 Brassica napus HOM05D005954 ORTHO05D007347 4.2e-28 128.6 142 65.5
BolC5t31496H Brassica oleracea HOM05D005954 ORTHO05D007347 4.2e-28 128.6 142 65.5
CDE05G1458 Ceratophyllum demersum HOM05D005954 ORTHO05D007347 7.2e-28 127.9 151 59.6
arahy.Tifrunner.gnm1.ann1.69550A Arachis hypogaea HOM05D005954 ORTHO05D007347 1.2e-27 127.1 150 60.7
CARHR028290 Cardamine hirsuta HOM05D005954 ORTHO05D007347 1.2e-27 127.1 170 57.1
Sopen01g025250 Solanum pennellii HOM05D005954 ORTHO05D007347 4.7e-27 125.2 167 56.3
HanXRQChr04g0116001 Helianthus annuus HOM05D005954 ORTHO05D007347 1.0e-26 124.0 149 61.1
MBI13_g00561_MAGBIO Magnolia biondii HOM05D005954 ORTHO05D007347 1.0e-26 124.0 148 60.8
DCAR_007962 Daucus carota HOM05D005954 ORTHO05D007347 6.8e-26 121.3 139 61.9
Hund23979 Selenicereus undatus HOM05D005954 ORTHO05D007347 1.2e-25 120.6 151 60.9
Psat1g199440 Pisum sativum HOM05D005954 ORTHO05D007347 1.5e-25 120.2 139 60.4
COL.COLO4_31320 Corchorus olitorius HOM05D005954 ORTHO05D007347 9.8e-25 117.5 79 81.0
Lj1P1194T69 Lonicera japonica HOM05D005954 ORTHO05D007347 4.9e-24 115.2 86 73.3
ECA236G0551 Erigeron canadensis HOM05D005954 ORTHO05D007347 1.1e-23 114.0 165 52.7
HPP92_016045 Vanilla planifolia HOM05D005954 ORTHO05D007347 1.1e-23 114.0 89 74.2
ATR0602G014 Amborella trichopoda HOM05D005954 ORTHO05D007347 4.1e-23 112.1 129 61.2
Rhsim13G0191500 Rhododendron simsii HOM05D005954 ORTHO05D007347 2.0e-22 109.8 161 52.2
Zm00001eb150530 Zea mays HOM05D005954 ORTHO05D007347 2.0e-22 109.8 102 66.7
CDE02G3841 Ceratophyllum demersum HOM05D005954 ORTHO05D009675 3.5e-22 109.0 134 60.4
Oeu001090.1 Olea europaea HOM05D005954 ORTHO05D007347 7.8e-22 107.8 111 63.1
vmacro01548 Vaccinium macrocarpon HOM05D005954 ORTHO05D007347 7.8e-22 107.8 149 51.0
Atru.chr10.1684 Acer truncatum HOM05D005954 ORTHO05D007347 6.6e-21 104.8 81 74.1
BcaC06g35397 Brassica carinata HOM05D005954 ORTHO05D007347 6.6e-21 104.8 160 51.9
Ca_00467_v3 Cicer arietinum L. HOM05D005954 ORTHO05D007347 6.6e-21 104.8 161 51.6
Ca_30955_v3 Cicer arietinum L. HOM05D005954 ORTHO05D007347 6.6e-21 104.8 161 51.6
MD16G1032400 Malus domestica HOM05D005954 ORTHO05D007347 6.6e-21 104.8 108 62.0
Os01g0805000 Oryza sativa ssp. japonica HOM05D005954 ORTHO05D007347 1.9e-20 103.2 91 64.8
Sc05g0007180 Simmondsia chinensis HOM05D005954 ORTHO05D007347 3.3e-20 102.4 78 73.1
unitig_22.g6753 Utricularia gibba HOM05D005954 ORTHO05D007347 4.3e-20 102.1 168 47.6
CAN.G889.12 Capsicum annuum HOM05D005954 ORTHO05D007347 1.6e-19 100.1 163 49.1
Lalb_Chr20g0121221 Lupinus albus HOM05D005954 ORTHO05D007347 8.0e-19 97.8 162 49.4
MD16G1032600 Malus domestica HOM05D005954 ORTHO05D007347 6.4e-16 88.2 125 52.8
CARHR028330 Cardamine hirsuta HOM05D005954 ORTHO05D007347 1.0e-13 80.9 59 79.7
Pp3c21_6450 Physcomitrium patens HOM05D005954 ORTHO05D007347 1.3e-13 80.5 124 55.6
Pp3c18_19220 Physcomitrium patens HOM05D005954 ORTHO05D007347 8.6e-13 77.8 136 50.0
SEGI_22528 Sequoiadendron giganteum HOM05D005954 ORTHO05D007347 5.6e-12 75.1 86 59.3
Mapoly0043s0046 Marchantia polymorpha HOM05D005954 ORTHO05D007347 8.0e-11 71.2 112 54.5
AagrBONN_evm.TU.Sc2ySwM_117.1983 Anthoceros agrestis HOM05D005954 ORTHO05D007347 1.4e-10 70.5 136 45.6
CBR_g29683 Chara braunii HOM05D005954 ORTHO05D007347 1.4e-10 70.5 110 50.0
Nn3g19836 Nelumbo nucifera HOM05D005954 ORTHO05D007347 2.4e-07 59.7 46 73.9


User provided reference genes

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