Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G0077 Cannabis sativa HOM05D007421 ORTHO05D009203 4.9e-157 557.8 282 100.0
Actinidia38971 Actinidia chinensis HOM05D003963 ORTHO05D004558 1.7e-29 134.0 360 33.6
CSS0030012 Camellia sinensis var. sinensis HOM05D007421 ORTHO05D009203 2.3e-29 133.7 350 34.0
CSS0048527 Camellia sinensis var. sinensis HOM05D007421 ORTHO05D009203 3.9e-29 132.9 350 34.0
Dinv24220 Davidia involucrata HOM05D007421 ORTHO05D009203 6.9e-26 122.1 318 34.6
Nn5g28883 Nelumbo nucifera HOM05D007421 ORTHO05D009203 1.5e-25 120.9 322 33.5
Cfa005578 Carpinus fangiana HOM05D007421 ORTHO05D009203 3.0e-21 106.7 328 31.7
Sed0000945 Sechium edule HOM05D007421 ORTHO05D009203 3.0e-21 106.7 363 30.9
TAR628G0675 Trochodendron aralioides HOM05D007421 ORTHO05D009203 3.9e-21 106.3 327 30.9
Ca_18335_v3 Cicer arietinum L. HOM05D007421 ORTHO05D009203 1.1e-20 104.8 340 32.4
Prupe.1G559900 Prunus persica HOM05D007421 ORTHO05D009203 9.6e-20 101.7 220 40.5
Lj4g0022412 Lotus japonicus HOM05D007421 ORTHO05D009203 3.7e-19 99.8 310 32.3
QL11p019404 Quercus lobata HOM05D007421 ORTHO05D009203 1.1e-18 98.2 137 42.3
RcHm_v2.0_Chr7g0225501 Rosa chinensis HOM05D007421 ORTHO05D009203 1.4e-18 97.8 203 39.4
Lj9C318G13 Lonicera japonica HOM05D007421 ORTHO05D009203 2.4e-18 97.1 135 45.9
Actinidia00249 Actinidia chinensis HOM05D007421 ORTHO05D009203 3.1e-18 96.7 271 32.5
TPR.G10446 Trifolium pratense HOM05D007421 ORTHO05D009203 3.1e-18 96.7 311 32.8
MD08G1222100 Malus domestica HOM05D007421 ORTHO05D009203 5.3e-18 95.9 236 37.3
vmacro01809 Vaccinium macrocarpon HOM05D007421 ORTHO05D009203 5.3e-18 95.9 328 31.1
Rhsim11G0134600 Rhododendron simsii HOM05D007421 ORTHO05D009203 9.0e-18 95.1 394 28.9
DCAR_029217 Daucus carota HOM05D007421 ORTHO05D009203 4.5e-17 92.8 280 31.8
Glyma.08G075000 Glycine max HOM05D007421 ORTHO05D009203 1.1e-15 88.2 301 31.9
ClCG09G021300 Citrullus lanatus HOM05D007421 ORTHO05D009203 1.4e-15 87.8 263 33.5
Haze_10776 Corylus avellana HOM05D007421 ORTHO05D009203 3.2e-15 86.7 202 35.1
CsaV3_7G012710 Cucumis sativus L. HOM05D007421 ORTHO05D009203 3.2e-15 86.7 258 33.3
FAN18G4438 Fragaria x ananassa HOM05D007421 ORTHO05D009203 5.5e-15 85.9 223 33.6
Glyma.05G120200 Glycine max HOM05D007421 ORTHO05D009203 9.3e-15 85.1 338 30.2
FvH4_5g30620 Fragaria vesca HOM05D007421 ORTHO05D009203 2.1e-14 84.0 223 33.2
CiPaw.06G151100 Carya illinoinensis HOM05D007421 ORTHO05D009203 6.0e-14 82.4 228 32.9
FAN04G0435 Fragaria x ananassa HOM05D007421 ORTHO05D009203 1.8e-13 80.9 219 36.1
EL10Ac8g19356 Beta vulgaris HOM05D007421 ORTHO05D009203 3.0e-13 80.1 270 31.1
TWI59G0537 Tripterygium wilfordii HOM05D007421 ORTHO05D009203 8.7e-13 78.6 302 29.5
Cc02_g21850 Coffea canephora HOM05D007421 ORTHO05D009203 1.5e-12 77.8 287 29.3
Sc08g0004770 Simmondsia chinensis HOM05D007421 ORTHO05D009203 1.9e-12 77.4 288 30.9
COL.COLO4_20870 Corchorus olitorius HOM05D007321 ORTHO05D009244 2.5e-12 77.0 261 33.3
Gohir.A13G065600 Gossypium hirsutum HOM05D007421 ORTHO05D009203 9.6e-12 75.1 220 36.8
Potri.005G176900 Populus trichocarpa HOM05D007421 ORTHO05D009203 9.6e-12 75.1 265 30.2
Atru.chr6.906 Acer truncatum HOM05D007421 ORTHO05D009203 2.1e-11 73.9 239 28.9
Thecc.02G143500 Theobroma cacao HOM05D007421 ORTHO05D009203 2.8e-11 73.6 275 32.4
Gorai.013G063400 Gossypium raimondii HOM05D007421 ORTHO05D009203 4.8e-11 72.8 220 35.5
Peaxi162Scf00003g03742 Petunia axillaris HOM05D007421 ORTHO05D009203 4.8e-11 72.8 336 27.4
Aqoxy5G02013 Aquilegia oxysepala HOM05D007421 ORTHO05D009203 1.8e-10 70.9 282 28.7
Cpa.g.sc0.12 Carica papaya HOM05D007421 ORTHO05D009203 2.4e-10 70.5 182 31.3
Manes.11G148500 Manihot esculenta HOM05D007421 ORTHO05D009203 2.4e-10 70.5 306 30.1
Nitab4.5_0011639g0020 Nicotiana tabacum HOM05D007421 ORTHO05D009203 2.4e-10 70.5 359 25.9
Sabra05G0133500 Salix brachista HOM05D007421 ORTHO05D009203 2.4e-10 70.5 275 29.8
Gohir.A03G171600 Gossypium hirsutum HOM05D007421 ORTHO05D009203 3.1e-10 70.1 270 31.1
CAN.G1034.36 Capsicum annuum HOM05D007421 ORTHO05D009203 4.1e-10 69.7 350 27.1
Nitab4.5_0000078g0170 Nicotiana tabacum HOM05D007421 ORTHO05D009203 4.1e-10 69.7 359 25.6
Oeu000232.1 Olea europaea HOM05D007421 ORTHO05D009203 4.1e-10 69.7 160 32.5
Phvul.002G206600 Phaseolus vulgaris HOM05D007421 ORTHO05D009203 9.0e-10 68.6 298 30.9
Ciclev10003479m.g Citrus clementina HOM05D007421 ORTHO05D009203 1.5e-09 67.8 255 29.8
Sopen10g016990 Solanum pennellii HOM05D007421 ORTHO05D009203 1.5e-09 67.8 353 26.9
DCAR_001801 Daucus carota HOM05D007421 ORTHO05D009203 2.0e-09 67.4 106 42.5
Psat7g097480 Pisum sativum HOM05D007421 ORTHO05D009203 2.0e-09 67.4 303 27.4
Gorai.005G217800 Gossypium raimondii HOM05D007421 ORTHO05D009203 5.9e-09 65.9 270 30.4
Nitab4.5_0004176g0040 Nicotiana tabacum HOM05D007421 ORTHO05D009203 1.3e-08 64.7 361 25.5
Solyc10g047040.3 Solanum lycopersicum HOM05D007421 ORTHO05D009203 1.3e-08 64.7 152 33.6
Haze_09992 Corylus avellana HOM05D003963 ORTHO05D004558 2.2e-08 63.9 176 33.5
Hma1.2p1_0012F.1_g007610 Hydrangea macrophylla HOM05D007421 ORTHO05D009203 2.2e-08 63.9 59 54.2
Potri.002G084750 Populus trichocarpa HOM05D007421 ORTHO05D009203 2.2e-08 63.9 260 32.3
RcHm_v2.0_Chr5g0049711 Rosa chinensis HOM05D007421 ORTHO05D009203 2.2e-08 63.9 162 35.8
PGSC0003DMG400024171 Solanum tuberosum HOM05D007421 ORTHO05D009203 2.2e-08 63.9 352 26.4
GSVIVG01022264001 Vitis vinifera HOM05D007421 ORTHO05D009203 1.1e-07 61.6 130 33.8
Gohir.D13G056100 Gossypium hirsutum HOM05D007421 ORTHO05D009203 1.4e-07 61.2 163 35.6
MBI07_g32548_MAGBIO Magnolia biondii HOM05D007421 ORTHO05D009203 7.2e-07 58.9 332 27.7
Medtr4g094292 Medicago truncatula HOM05D007421 ORTHO05D009203 9.3e-07 58.5 288 27.4
RcHm_v2.0_Chr7g0236151 Rosa chinensis HOM05D007421 ORTHO05D009203 1.6e-06 57.8 151 33.8
ECA236G4083 Erigeron canadensis HOM05D007421 ORTHO05D009203 6.1e-06 55.8 138 34.1


User provided reference genes

Program Settings