Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G3269 Cannabis sativa HOM05D005313 ORTHO05D006317 1.3e-205 719.5 378 100.0
Atru.chr9.122 Acer truncatum HOM05D005313 ORTHO05D006317 1.3e-152 543.5 335 83.6
QL01p001863 Quercus lobata HOM05D005313 ORTHO05D006317 1.9e-151 539.7 341 81.8
Potri.008G128900 Populus trichocarpa HOM05D005313 ORTHO05D006317 7.0e-151 537.7 346 80.3
Cfa008602 Carpinus fangiana HOM05D005313 ORTHO05D006317 6.0e-150 534.6 329 83.3
GSVIVG01011763001 Vitis vinifera HOM05D005313 ORTHO05D006317 5.0e-149 531.6 315 85.7
CSS0048776 Camellia sinensis var. sinensis HOM05D005313 ORTHO05D006317 8.6e-149 530.8 325 83.1
Thecc.02G280500 Theobroma cacao HOM05D005313 ORTHO05D006317 8.6e-149 530.8 350 78.6
TWI31G1405 Tripterygium wilfordii HOM05D005313 ORTHO05D006317 1.5e-148 530.0 335 81.2
COL.COLO4_20475 Corchorus olitorius HOM05D005313 ORTHO05D006317 2.5e-148 529.3 325 83.4
Gorai.002G179900 Gossypium raimondii HOM05D005313 ORTHO05D006317 2.5e-148 529.3 350 78.0
Lj6A747T68 Lonicera japonica HOM05D005313 ORTHO05D006317 9.5e-148 527.3 326 82.2
MD16G1029000 Malus domestica HOM05D005313 ORTHO05D006317 2.8e-147 525.8 346 79.2
Manes.17G006600 Manihot esculenta HOM05D005313 ORTHO05D006317 2.8e-147 525.8 355 77.7
TAR623G0220 Trochodendron aralioides HOM05D005313 ORTHO05D006317 3.6e-147 525.4 335 81.5
Gohir.A01G152800 Gossypium hirsutum HOM05D005313 ORTHO05D006317 6.2e-147 524.6 350 77.7
Lalb_Chr17g0338641 Lupinus albus HOM05D005313 ORTHO05D006317 8.1e-147 524.2 335 78.8
Gohir.D01G145600 Gossypium hirsutum HOM05D005313 ORTHO05D006317 1.1e-146 523.9 350 77.1
Prupe.1G323900 Prunus persica HOM05D005313 ORTHO05D006317 1.4e-146 523.5 335 81.8
Sed0021241 Sechium edule HOM05D005313 ORTHO05D006317 1.4e-146 523.5 338 79.3
Eucgr.G02191 Eucalyptus grandis HOM05D005313 ORTHO05D006317 1.8e-146 523.1 348 76.7
vmacro10642 Vaccinium macrocarpon HOM05D005313 ORTHO05D006317 6.8e-146 521.2 342 78.9
CsaV3_5G013570 Cucumis sativus L. HOM05D005313 ORTHO05D006317 1.2e-145 520.4 355 76.1
VMungo1215G0481 Vigna mungo HOM05D005313 ORTHO05D006317 1.2e-145 520.4 329 79.3
Glyma.02G238100 Glycine max HOM05D005313 ORTHO05D006317 2.6e-145 519.2 335 79.4
Cc11_g08770 Coffea canephora HOM05D005313 ORTHO05D006317 3.4e-145 518.8 326 81.3
Medtr1g030750 Medicago truncatula HOM05D005313 ORTHO05D006317 3.4e-145 518.8 331 79.8
PSO384G2037 Papaver somniferum HOM05D005313 ORTHO05D006317 3.4e-145 518.8 336 79.2
Rhsim02G0199800 Rhododendron simsii HOM05D005313 ORTHO05D006317 3.4e-145 518.8 323 82.0
MELO3C018332.2 Cucumis melo HOM05D005313 ORTHO05D006317 5.8e-145 518.1 321 81.3
RcHm_v2.0_Chr4g0441121 Rosa chinensis HOM05D005313 ORTHO05D006317 5.8e-145 518.1 355 76.1
FvH4_4g32330 Fragaria vesca HOM05D005313 ORTHO05D006317 7.5e-145 517.7 370 73.2
Glyma.09G118600 Glycine max HOM05D005313 ORTHO05D006317 7.5e-145 517.7 335 79.1
Thhalv10000908m.g Eutrema salsugineum HOM05D005313 ORTHO05D006317 2.2e-144 516.2 339 79.4
CARHR143870 Cardamine hirsuta HOM05D005313 ORTHO05D006317 3.7e-144 515.4 336 79.2
Psat6g042560 Pisum sativum HOM05D005313 ORTHO05D006317 6.4e-144 514.6 323 80.5
FAN17G2517 Fragaria x ananassa HOM05D005313 ORTHO05D006317 1.1e-143 513.8 377 72.1
BcaB07g30404 Brassica carinata HOM05D005313 ORTHO05D006317 1.9e-143 513.1 336 78.9
AL5G10310 Arabidopsis lyrata HOM05D005313 ORTHO05D006317 2.4e-143 512.7 336 78.0
PSO339G3364 Papaver somniferum HOM05D005313 ORTHO05D006317 2.4e-143 512.7 336 78.6
Phvul.003G023500 Phaseolus vulgaris HOM05D005313 ORTHO05D006317 2.4e-143 512.7 320 80.6
ECA246G2448 Erigeron canadensis HOM05D005313 ORTHO05D006317 3.2e-143 512.3 347 77.2
Carub.0005s0033 Capsella rubella HOM05D005313 ORTHO05D006317 4.1e-143 511.9 321 81.9
Lj2g0003652 Lotus japonicus HOM05D005313 ORTHO05D006317 4.1e-143 511.9 365 74.0
Sc14g0007170 Simmondsia chinensis HOM05D005313 ORTHO05D006317 4.1e-143 511.9 317 80.8
Sp2g12800 Schrenkiella parvula HOM05D005313 ORTHO05D006317 5.4e-143 511.5 339 78.8
AT2G01350 Arabidopsis thaliana HOM05D005313 ORTHO05D006317 9.2e-143 510.8 336 78.6
PGR119G0894 Punica granatum HOM05D005313 ORTHO05D006317 1.6e-142 510.0 316 81.6
Aa31LG2G8560 Aethionema arabicum HOM05D005313 ORTHO05D006317 2.1e-142 509.6 331 80.1
THA.LOC104805057 Tarenaya hassleriana HOM05D005313 ORTHO05D006317 2.1e-142 509.6 321 79.8
A02p31910 Brassica napus HOM05D005313 ORTHO05D006317 2.7e-142 509.2 336 78.9
BraA02t08201Z Brassica rapa HOM05D005313 ORTHO05D006317 2.7e-142 509.2 336 78.9
FAN22G0311 Fragaria x ananassa HOM05D005313 ORTHO05D006317 3.5e-142 508.8 377 71.4
Lsat_1_v5_gn_3_54641 Lactuca sativa HOM05D005313 ORTHO05D006317 3.5e-142 508.8 350 75.7
Solyc05g008180.3 Solanum lycopersicum HOM05D005313 ORTHO05D006317 4.6e-142 508.4 326 79.4
BolC2t11026H Brassica oleracea HOM05D005313 ORTHO05D006317 6.0e-142 508.1 336 78.6
Nitab4.5_0000742g0010 Nicotiana tabacum HOM05D005313 ORTHO05D006317 6.0e-142 508.1 338 77.2
Sopen05g004020 Solanum pennellii HOM05D005313 ORTHO05D006317 6.0e-142 508.1 326 79.4
C02p49400 Brassica napus HOM05D005313 ORTHO05D006317 1.0e-141 507.3 337 78.6
SalBow4G0219 Salvia bowleyana HOM05D005313 ORTHO05D006317 1.3e-141 506.9 338 78.4
BcaC03g17029 Brassica carinata HOM05D005313 ORTHO05D006317 1.7e-141 506.5 336 78.3
Ca_25713_v3 Cicer arietinum L. HOM05D005313 ORTHO05D006317 6.6e-141 504.6 369 72.1
Oeu024584.1 Olea europaea HOM05D005313 ORTHO05D006317 6.6e-141 504.6 344 75.6
Sabra08G0097700 Salix brachista HOM05D005313 ORTHO05D006317 6.6e-141 504.6 407 68.1
HanXRQChr15g0488661 Helianthus annuus HOM05D005313 ORTHO05D006317 8.6e-141 504.2 318 79.9
MSTRG.895 Avicennia marina HOM05D005313 ORTHO05D006317 1.1e-140 503.8 326 78.2
CDE05G1915 Ceratophyllum demersum HOM05D005313 ORTHO05D006317 1.1e-140 503.8 338 76.6
FAN07G2253 Fragaria x ananassa HOM05D005313 ORTHO05D006317 3.3e-140 502.3 395 68.4
Hund08629 Selenicereus undatus HOM05D005313 ORTHO05D006317 9.5e-140 500.7 311 80.7
AUR62017725 Chenopodium quinoa HOM05D005313 ORTHO05D006317 8.1e-139 497.7 311 80.7
PGSC0003DMG400030501 Solanum tuberosum HOM05D005313 ORTHO05D006317 1.1e-138 497.3 318 79.6
EL10Ac7g15995 Beta vulgaris HOM05D005313 ORTHO05D006317 1.8e-138 496.5 311 79.7
Peaxi162Scf00159g00112 Petunia axillaris HOM05D005313 ORTHO05D006317 5.2e-138 495.0 345 75.7
Peaxi162Scf00450g00614 Petunia axillaris HOM05D005313 ORTHO05D006317 1.2e-137 493.8 345 75.4
Aqoxy1G00025 Aquilegia oxysepala HOM05D005313 ORTHO05D006317 2.0e-137 493.0 313 80.5
HPP92_025383 Vanilla planifolia HOM05D005313 ORTHO05D006317 1.9e-135 486.5 354 70.3
Os09g0553600 Oryza sativa ssp. japonica HOM05D005313 ORTHO05D006317 1.6e-134 483.4 313 77.3
Haze_11011 Corylus avellana HOM05D005313 ORTHO05D006317 1.3e-133 480.3 304 80.9
Zm00001eb104420 Zea mays HOM05D005313 ORTHO05D006317 2.3e-133 479.6 346 72.5
Dinv17424 Davidia involucrata HOM05D005313 ORTHO05D006317 1.5e-132 476.9 324 76.5
AUR62032955 Chenopodium quinoa HOM05D005313 ORTHO05D006317 3.6e-131 472.2 364 69.5
Ah.01g012630 Amaranthus hybridus HOM05D005313 ORTHO05D006317 3.1e-130 469.2 318 76.1
Duzib248G1582 Durio zibethinus HOM05D005313 ORTHO05D006317 3.1e-130 469.2 335 74.6
Cpa.g.sc65.129 Carica papaya HOM05D005313 ORTHO05D006317 3.2e-127 459.1 325 75.4
BcaC03g17031 Brassica carinata HOM05D005313 ORTHO05D006317 1.6e-126 456.8 336 73.8
CAN.G1334.2 Capsicum annuum HOM05D005313 ORTHO05D006317 6.0e-126 454.9 287 81.5
SalBow4G0808 Salvia bowleyana HOM05D005313 ORTHO05D006317 6.6e-125 451.4 305 76.7
Ciclev10018157m.g Citrus clementina HOM05D005313 ORTHO05D006317 1.4e-122 443.7 287 79.1
Pp3c8_18030 Physcomitrium patens HOM05D005313 ORTHO05D006317 1.4e-122 443.7 313 72.5
SGA_v2.0_scaffold50G18517 Striga asiatica HOM05D005313 ORTHO05D006317 2.6e-121 439.5 326 71.2
CiPaw.06G012200 Carya illinoinensis HOM05D005313 ORTHO05D006317 3.4e-121 439.1 290 77.2
FAN12G1743 Fragaria x ananassa HOM05D005313 ORTHO05D006317 1.3e-120 437.2 424 59.0
Duzib248G1474 Durio zibethinus HOM05D005313 ORTHO05D006317 8.4e-120 434.5 282 79.1
Nn2g15695 Nelumbo nucifera HOM05D005313 ORTHO05D006317 1.1e-116 424.1 357 65.8
unitig_0.g2330 Utricularia gibba HOM05D005313 ORTHO05D006317 1.8e-114 416.8 337 66.2
Migut.L00987 Erythranthe guttata HOM05D005313 ORTHO05D006317 1.7e-112 410.2 271 75.6
Mapoly0011s0070 Marchantia polymorpha HOM05D005313 ORTHO05D006317 1.6e-110 403.7 298 67.8
SMO164G0169 Selaginella moellendorffii HOM05D005313 ORTHO05D006317 2.1e-110 403.3 313 66.8
CBR_g30917 Chara braunii HOM05D005313 ORTHO05D006317 1.1e-106 391.0 314 66.6
arahy.Tifrunner.gnm1.ann1.Y1EHRK Arachis hypogaea HOM05D005313 ORTHO05D006317 2.4e-106 389.8 342 62.3
Nitab4.5_0004816g0010 Nicotiana tabacum HOM05D005313 ORTHO05D006317 2.4e-106 389.8 242 83.1
arahy.Tifrunner.gnm1.ann1.G5QWBZ Arachis hypogaea HOM05D005313 ORTHO05D006317 1.0e-104 384.4 351 61.0
SEGI_23840 Sequoiadendron giganteum HOM05D005313 ORTHO05D006317 1.3e-101 374.0 255 74.1
DCAR_023608 Daucus carota HOM05D005313 ORTHO05D006317 1.1e-92 344.4 221 78.7
Ca_12605_v3 Cicer arietinum L. HOM05D005313 ORTHO05D006317 6.5e-88 328.6 210 76.2
MCO15G382 Micromonas commoda HOM05D005313 ORTHO05D006317 1.5e-84 317.4 303 55.8
PRCOL_00006420 Prasinoderma coloniale HOM05D005313 ORTHO05D006317 5.7e-84 315.5 321 53.9
AagrBONN_evm.TU.Sc2ySwM_117.3802 Anthoceros agrestis HOM05D005313 ORTHO05D006317 7.7e-81 305.1 230 67.0
Cre02.g141200 Chlamydomonas reinhardtii HOM05D005313 ORTHO05D006317 1.3e-80 304.3 308 56.2
ClCG07G006260 Citrullus lanatus HOM05D005313 ORTHO05D006317 1.7e-80 303.9 187 81.8
ATR0807G196 Amborella trichopoda HOM05D005313 ORTHO05D006317 5.5e-79 298.9 192 79.2
Zm00001eb320780 Zea mays HOM05D005313 ORTHO05D006317 5.9e-73 278.9 220 65.9
Dinv05167 Davidia involucrata HOM05D005313 ORTHO05D006317 3.3e-68 263.1 167 81.4
Potri.010G113500 Populus trichocarpa HOM05D005313 ORTHO05D006317 6.3e-67 258.8 202 64.4
Migut.L00982 Erythranthe guttata HOM05D005313 ORTHO05D006317 5.7e-60 235.7 326 45.4
CsaV3_UNG236450 Cucumis sativus L. HOM05D005313 ORTHO05D006317 1.6e-57 227.6 277 48.4
Actinidia26811 Actinidia chinensis HOM05D005313 ORTHO05D006317 8.0e-54 215.3 151 72.8
SHI04677 Sapria himalayana HOM05D005313 ORTHO05D006317 2.2e-51 207.2 186 59.7
A06p44480 Brassica napus HOM05D005313 ORTHO05D006317 1.0e-45 188.3 242 51.2
SHI04675 Sapria himalayana HOM05D005313 ORTHO05D006317 2.0e-44 184.1 133 68.4
AagrBONN_evm.TU.Sc2ySwM_368.1836 Anthoceros agrestis HOM05D005313 ORTHO05D006317 8.6e-40 168.7 163 58.3
RcHm_v2.0_Chr2g0157601 Rosa chinensis HOM05D005313 ORTHO05D006317 2.1e-38 164.1 107 73.8
ClCG07G006250 Citrullus lanatus HOM05D005313 ORTHO05D006317 3.6e-38 163.3 107 70.1
Ca_31307_v3 Cicer arietinum L. HOM05D005313 ORTHO05D006317 6.2e-38 162.5 280 36.1
Actinidia14964 Actinidia chinensis HOM05D005313 ORTHO05D006317 8.9e-37 158.7 265 41.1
Sabra10G0083500 Salix brachista HOM05D005313 ORTHO05D006317 1.6e-33 147.9 266 37.6
Oeu045874.1 Olea europaea HOM05D005313 ORTHO05D006317 3.0e-32 143.7 140 60.0
TPR.G36891 Trifolium pratense HOM05D005313 ORTHO05D006317 4.0e-29 133.3 101 72.3
COL.COLO4_10085 Corchorus olitorius HOM05D005313 ORTHO05D006317 9.9e-28 128.6 85 70.6
Glyma.07G165500 Glycine max HOM05D005313 ORTHO05D006317 6.4e-27 125.9 97 68.0
CsaV3_UNG236470 Cucumis sativus L. HOM05D005313 ORTHO05D006317 1.2e-20 105.1 60 88.3
CSS0042289 Camellia sinensis var. sinensis HOM05D005313 ORTHO05D006317 7.6e-20 102.4 109 54.1
CAN.G1020.2 Capsicum annuum HOM05D005313 ORTHO05D006317 2.9e-19 100.5 141 44.7
COL.COLO4_10084 Corchorus olitorius HOM05D005313 ORTHO05D006317 1.1e-18 98.6 54 83.3
Aa31LG11G8270 Aethionema arabicum HOM05D005313 ORTHO05D006317 1.4e-18 98.2 88 64.8
MBI06_g07791_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.1e-17 94.4 59 86.4
TPR.G36912 Trifolium pratense HOM05D005313 ORTHO05D006317 3.5e-17 93.6 113 48.7
Aa31LG11G8280 Aethionema arabicum HOM05D005313 ORTHO05D006317 9.6e-15 85.5 62 64.5
BcaC06g31315 Brassica carinata HOM05D005313 ORTHO05D006317 1.1e-13 82.0 55 70.9
Actinidia01955 Actinidia chinensis HOM05D005313 ORTHO05D006317 4.4e-12 76.6 43 86.0
AagrBONN_evm.TU.Sc2ySwM_117.3801 Anthoceros agrestis HOM05D005313 ORTHO05D006317 1.5e-07 61.6 71 53.5
DCAR_023607 Daucus carota HOM05D005313 ORTHO05D006317 6.2e-06 56.2 38 71.1


User provided reference genes

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