Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G3222 Cannabis sativa HOM05D007874 ORTHO05D009614 4.4e-80 301.2 149 100.0
CiPaw.05G249700 Carya illinoinensis HOM05D007874 ORTHO05D009614 7.6e-24 114.4 153 50.3
Cpa.g.sc65.135 Carica papaya HOM05D007874 ORTHO05D009614 1.3e-23 113.6 149 49.7
Haze_11010 Corylus avellana HOM05D007874 ORTHO05D009614 9.6e-19 97.4 145 45.5
Manes.17G076900 Manihot esculenta HOM05D007874 ORTHO05D009614 1.3e-18 97.1 146 43.2
QL01p001738 Quercus lobata HOM05D007874 ORTHO05D009614 2.1e-18 96.3 147 42.9
CiPaw.06G012000 Carya illinoinensis HOM05D007874 ORTHO05D009614 2.8e-18 95.9 146 43.2
Sabra10G0083200 Salix brachista HOM05D007874 ORTHO05D009614 8.1e-18 94.4 137 46.0
Ciclev10017051m.g Citrus clementina HOM05D007874 ORTHO05D009614 6.9e-17 91.3 155 41.9
Duzib251G0922 Durio zibethinus HOM05D007874 ORTHO05D009614 4.5e-16 88.6 151 41.7
PGR102G2496 Punica granatum HOM05D007874 ORTHO05D009614 9.9e-16 87.4 147 42.9
Thecc.02G281500 Theobroma cacao HOM05D007874 ORTHO05D009614 9.9e-16 87.4 154 40.9
Potri.008G129200 Populus trichocarpa HOM05D007874 ORTHO05D009614 2.2e-15 86.3 149 43.0
CARHR064260 Cardamine hirsuta HOM05D007874 ORTHO05D009614 4.9e-15 85.1 144 39.6
EL10Ac6g14213 Beta vulgaris HOM05D007874 ORTHO05D009614 8.4e-15 84.3 145 41.4
RcHm_v2.0_Chr4g0441281 Rosa chinensis HOM05D020194 ORTHO05D009614 8.4e-15 84.3 142 40.1
Hma1.2p1_0096F.1_g047930 Hydrangea macrophylla HOM05D007874 ORTHO05D009614 5.4e-14 81.6 145 39.3
Gorai.002G179200 Gossypium raimondii HOM05D007874 ORTHO05D009614 7.9e-13 77.8 148 40.5
Psat7g128240 Pisum sativum HOM05D007874 ORTHO05D009614 7.9e-13 77.8 158 38.6
Sed0007191 Sechium edule HOM05D007874 ORTHO05D009614 3.9e-12 75.5 141 38.3
Manes.15G127500 Manihot esculenta HOM05D007874 ORTHO05D009614 5.1e-12 75.1 152 40.8
Glyma.07G216900 Glycine max HOM05D017162 ORTHO05D009614 6.7e-12 74.7 124 40.3
Lsat_1_v5_gn_3_54800 Lactuca sativa HOM05D007874 ORTHO05D009614 1.1e-11 73.9 139 37.4
Sabra08G0097900 Salix brachista HOM05D007874 ORTHO05D009614 4.3e-11 72.0 149 39.6
Duzib248G1518 Durio zibethinus HOM05D007874 ORTHO05D009614 5.6e-11 71.6 113 45.1
Dinv05171 Davidia involucrata HOM05D007874 ORTHO05D009614 1.3e-10 70.5 125 39.2
Eucgr.G02190 Eucalyptus grandis HOM05D007874 ORTHO05D009614 1.3e-10 70.5 115 43.5
Thhalv10019301m.g Eutrema salsugineum HOM05D007874 ORTHO05D009614 1.1e-09 67.4 139 35.3
THA.LOC104809191 Tarenaya hassleriana HOM05D007874 ORTHO05D009614 1.1e-09 67.4 110 41.8
MELO3C005324.2 Cucumis melo HOM05D030674 ORTHO05D009614 1.8e-09 66.6 143 39.2
Gohir.D01G145200 Gossypium hirsutum HOM05D007874 ORTHO05D009614 2.4e-09 66.2 151 38.4
MSTRG.901 Avicennia marina HOM05D007874 ORTHO05D009614 4.0e-09 65.5 147 41.5
BcaB05g24626 Brassica carinata HOM05D007874 ORTHO05D009614 5.3e-09 65.1 134 38.1
FAN07G2552 Fragaria x ananassa HOM05D020194 ORTHO05D025497 2.0e-08 63.2 103 46.6
Nitab4.5_0002523g0020 Nicotiana tabacum HOM05D007874 ORTHO05D009614 4.5e-08 62.0 142 38.7
Aa31LG4G10100 Aethionema arabicum HOM05D007874 ORTHO05D009614 5.8e-08 61.6 102 43.1
AT1G70985 Arabidopsis thaliana HOM05D007874 ORTHO05D009614 9.9e-08 60.8 137 34.3
BcaB03g14859 Brassica carinata HOM05D007874 ORTHO05D009614 1.3e-07 60.5 132 34.1
Medtr4g084950 Medicago truncatula HOM05D017162 ORTHO05D009614 2.2e-07 59.7 94 46.8
Cc11_g08720 Coffea canephora HOM05D007874 ORTHO05D009614 4.9e-07 58.5 141 34.0
Prupe.1G324600 Prunus persica HOM05D007874 ORTHO05D009614 4.9e-07 58.5 147 32.7
AT1G23050 Arabidopsis thaliana HOM05D007874 ORTHO05D009614 8.4e-07 57.8 144 34.7
FAN17G2583 Fragaria x ananassa HOM05D020194 ORTHO05D025497 8.4e-07 57.8 91 41.8
FAN22G1452 Fragaria x ananassa HOM05D020194 ORTHO05D025497 8.4e-07 57.8 91 41.8
Lalb_Chr05g0219441 Lupinus albus HOM05D007874 ORTHO05D009614 1.1e-06 57.4 143 34.3
TAR622G1026 Trochodendron aralioides HOM05D032524 ORTHO05D009614 1.4e-06 57.0 117 39.3
Eucgr.B02901 Eucalyptus grandis HOM05D007874 ORTHO05D009614 1.9e-06 56.6 141 33.3
Sp5g26130 Schrenkiella parvula HOM05D007874 ORTHO05D009614 2.4e-06 56.2 136 33.8
CsaV3_5G028610 Cucumis sativus L. HOM05D030674 ORTHO05D009614 3.2e-06 55.8 97 42.3
Nitab4.5_0000742g0160 Nicotiana tabacum HOM05D007874 ORTHO05D009614 5.5e-06 55.1 153 32.0
Atru.chr11.536 Acer truncatum HOM05D007874 ORTHO05D009614 7.1e-06 54.7 103 40.8
ClCG01G006070 Citrullus lanatus HOM05D030674 ORTHO05D009614 7.1e-06 54.7 140 35.0
Rhsim09G0067000 Rhododendron simsii HOM05D007874 ORTHO05D009614 7.1e-06 54.7 121 38.0


User provided reference genes

Program Settings