Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G3167 Cannabis sativa HOM05D007502 ORTHO05D010230 1.9e-85 319.3 183 100.0
Prupe.6G218900 Prunus persica HOM05D007502 ORTHO05D010230 2.3e-22 109.8 159 49.1
CSS0024819 Camellia sinensis var. sinensis HOM05D007502 ORTHO05D010230 2.1e-20 103.2 171 41.5
CiPaw.01G003100 Carya illinoinensis HOM05D007502 ORTHO05D010230 3.7e-20 102.4 176 41.5
RcHm_v2.0_Chr2g0108411 Rosa chinensis HOM05D007502 ORTHO05D010230 4.0e-19 99.0 152 55.9
MD15G1299000 Malus domestica HOM05D007502 ORTHO05D010230 9.0e-19 97.8 156 46.2
Medtr5g015230 Medicago truncatula HOM05D007502 ORTHO05D010230 1.3e-17 94.0 165 38.8
Cpa.g.c26343.2 Carica papaya HOM05D007502 ORTHO05D010230 8.4e-17 91.3 177 36.7
Potri.007G006000 Populus trichocarpa HOM05D007502 ORTHO05D010230 1.9e-16 90.1 170 41.2
Lalb_Chr05g0213781 Lupinus albus HOM05D007502 ORTHO05D010230 2.5e-16 89.7 161 36.6
Cfa004764 Carpinus fangiana HOM05D007502 ORTHO05D010230 5.5e-16 88.6 187 39.6
Ciclev10027603m.g Citrus clementina HOM05D007502 ORTHO05D010230 7.1e-16 88.2 170 41.8
Eucgr.I00691 Eucalyptus grandis HOM05D007502 ORTHO05D010230 9.3e-16 87.8 176 38.6
vmacro05426 Vaccinium macrocarpon HOM05D007502 ORTHO05D010230 3.5e-15 85.9 160 38.8
QL06p039372 Quercus lobata HOM05D007502 ORTHO05D010230 6.0e-15 85.1 159 40.9
Gorai.007G225000 Gossypium raimondii HOM05D007502 ORTHO05D010230 7.9e-15 84.7 185 37.8
C03p59700 Brassica napus HOM05D007502 ORTHO05D011692 1.0e-14 84.3 164 39.0
BolC3t18232H Brassica oleracea HOM05D007502 ORTHO05D011692 1.0e-14 84.3 164 39.0
Cc07_g07260 Coffea canephora HOM05D007502 ORTHO05D010230 1.3e-14 84.0 168 38.7
Glyma.11G046600 Glycine max HOM05D007502 ORTHO05D010230 1.8e-14 83.6 165 37.6
Gohir.D11G209800 Gossypium hirsutum HOM05D007502 ORTHO05D010230 1.9e-13 80.1 181 37.6
GSVIVG01002329001 Vitis vinifera HOM05D007502 ORTHO05D010230 2.5e-13 79.7 175 41.7
Gohir.A11G213400 Gossypium hirsutum HOM05D007502 ORTHO05D010230 5.7e-13 78.6 177 36.2
Haze_10361 Corylus avellana HOM05D007502 ORTHO05D010230 1.3e-12 77.4 180 37.2
DCAR_025816 Daucus carota HOM05D007502 ORTHO05D010230 2.8e-12 76.3 155 40.6
Solyc02g092200.3 Solanum lycopersicum HOM05D007502 ORTHO05D010230 2.8e-12 76.3 158 37.3
CARHR279950 Cardamine hirsuta HOM05D007502 ORTHO05D010230 4.8e-12 75.5 158 38.0
Thecc.01G074400 Theobroma cacao HOM05D007502 ORTHO05D010230 4.8e-12 75.5 180 36.7
A06p32780 Brassica napus HOM05D007502 ORTHO05D011692 6.3e-12 75.1 156 37.8
COL.COLO4_11595 Corchorus olitorius HOM05D007502 ORTHO05D010230 6.3e-12 75.1 184 34.8
Duzib187G0517 Durio zibethinus HOM05D007502 ORTHO05D010230 6.3e-12 75.1 194 39.7
TAR628G1349 Trochodendron aralioides HOM05D007502 ORTHO05D010230 6.3e-12 75.1 152 36.8
BraA06t26210Z Brassica rapa HOM05D007502 ORTHO05D011692 1.4e-11 73.9 166 38.0
Actinidia11971 Actinidia chinensis HOM05D007502 ORTHO05D010230 1.8e-11 73.6 105 50.5
CSS0004026 Camellia sinensis var. sinensis HOM05D007502 ORTHO05D010230 1.8e-11 73.6 134 38.1
PGSC0003DMG401021412 Solanum tuberosum HOM05D007502 ORTHO05D010230 2.4e-11 73.2 151 37.1
Lsat_1_v5_gn_2_82580 Lactuca sativa HOM05D007502 ORTHO05D010230 4.1e-11 72.4 161 35.4
Ca_24677_v3 Cicer arietinum L. HOM05D007502 ORTHO05D010230 6.9e-11 71.6 95 45.3
arahy.Tifrunner.gnm1.ann1.69I0H7 Arachis hypogaea HOM05D007502 ORTHO05D010230 9.0e-11 71.2 164 35.4
Sopen02g036770 Solanum pennellii HOM05D007502 ORTHO05D010230 9.0e-11 71.2 177 35.6
RhsimUnG0241800 Rhododendron simsii HOM05D007502 ORTHO05D010230 2.0e-10 70.1 108 47.2
Lj2g0008607 Lotus japonicus HOM05D007502 ORTHO05D010230 3.4e-10 69.3 185 31.4
BcaB02g09909 Brassica carinata HOM05D007502 ORTHO05D010230 4.5e-10 68.9 168 35.1
Psat2g171920 Pisum sativum HOM05D007502 ORTHO05D010230 4.5e-10 68.9 126 35.7
MSTRG.3478 Avicennia marina HOM05D007502 ORTHO05D010230 1.3e-09 67.4 114 45.6
Phvul.002G009800 Phaseolus vulgaris HOM05D007502 ORTHO05D010230 1.7e-09 67.0 170 30.6
VMungo1215G1334 Vigna mungo HOM05D007502 ORTHO05D010230 1.7e-09 67.0 188 29.3
arahy.Tifrunner.gnm1.ann1.W7GVX2 Arachis hypogaea HOM05D007502 ORTHO05D010230 2.9e-09 66.2 167 33.5
AT5G67640 Arabidopsis thaliana HOM05D007502 ORTHO05D010230 6.5e-09 65.1 188 34.6
ECA238G4396 Erigeron canadensis HOM05D007502 ORTHO05D010230 8.5e-09 64.7 168 37.5
Sabra07G0004300 Salix brachista HOM05D007502 ORTHO05D010230 1.1e-08 64.3 195 32.3
SalBow5G4540 Salvia bowleyana HOM05D007502 ORTHO05D010230 1.1e-08 64.3 175 43.4
Nitab4.5_0000142g0280 Nicotiana tabacum HOM05D007502 ORTHO05D010230 7.2e-08 61.6 195 31.3
Dinv26948 Davidia involucrata HOM05D001896 ORTHO05D001862 1.2e-07 60.8 113 44.2
Thhalv10005075m.g Eutrema salsugineum HOM05D007502 ORTHO05D010230 1.2e-07 60.8 117 35.9
Glyma.01G195100 Glycine max HOM05D007502 ORTHO05D010230 2.7e-07 59.7 109 33.0
FAN23G3114 Fragaria x ananassa HOM05D007502 ORTHO05D010230 1.8e-06 57.0 92 47.8
Lsat_1_v5_gn_5_174300 Lactuca sativa HOM05D007502 ORTHO05D010230 2.3e-06 56.6 115 37.4
Carub.0008s2683 Capsella rubella HOM05D007502 ORTHO05D010230 3.0e-06 56.2 183 33.3
Peaxi162Scf00548g00223 Petunia axillaris HOM05D007502 ORTHO05D010230 8.8e-06 54.7 103 40.8


User provided reference genes

Program Settings