Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G3033 Cannabis sativa HOM05D008721 ORTHO05D000137 6.0e-82 307.4 147 100.0
CANSAT21G0858 Cannabis sativa HOM05D008721 ORTHO05D000137 2.5e-80 302.0 146 97.9
CANSAT25G3227 Cannabis sativa HOM05D008721 ORTHO05D000137 2.5e-80 302.0 146 97.9
CANSAT80G0449 Cannabis sativa HOM05D008721 ORTHO05D000137 5.6e-80 300.8 146 97.3
CANSAT80G1051 Cannabis sativa HOM05D008721 ORTHO05D000137 7.4e-80 300.4 146 97.9
CANSAT11G0393 Cannabis sativa HOM05D008721 ORTHO05D000137 4.8e-79 297.7 146 97.3
CANSAT25G0487 Cannabis sativa HOM05D008721 ORTHO05D000137 1.1e-78 296.6 146 96.6
CANSAT54G1171 Cannabis sativa HOM05D008721 ORTHO05D000482 9.9e-77 290.0 146 96.6
CANSAT11G1365 Cannabis sativa HOM05D008636 ORTHO05D000137 1.3e-52 209.9 98 94.9
CANSAT25G1620 Cannabis sativa HOM05D008721 ORTHO05D000482 6.3e-47 191.0 96 97.9
CANSAT54G0650 Cannabis sativa HOM05D008721 ORTHO05D000482 5.0e-44 181.4 96 92.7
ATR0441G001 Amborella trichopoda HOM05D008721 ORTHO05D000137 5.7e-40 167.9 138 68.1
CANSAT54G1761 Cannabis sativa HOM05D008721 ORTHO05D000137 3.1e-38 162.2 105 79.0
CANSAT56G3453 Cannabis sativa HOM05D008636 ORTHO05D000137 4.2e-35 151.8 144 56.2
CANSAT01G0053 Cannabis sativa HOM05D008636 ORTHO05D000137 1.6e-34 149.8 143 55.9
CANSAT11G0656 Cannabis sativa HOM05D008636 ORTHO05D000137 1.6e-34 149.8 144 55.6
CANSAT21G0896 Cannabis sativa HOM05D008636 ORTHO05D000137 1.6e-34 149.8 143 55.9
CANSAT54G0860 Cannabis sativa HOM05D008636 ORTHO05D000137 1.6e-34 149.8 143 55.9
CANSAT35G1851 Cannabis sativa HOM05D008636 ORTHO05D000137 2.1e-34 149.4 143 55.9
CANSAT56G1903 Cannabis sativa HOM05D008721 ORTHO05D000137 6.1e-34 147.9 79 94.9
CANSAT25G1366 Cannabis sativa HOM05D008636 ORTHO05D000137 8.0e-34 147.5 143 55.2
CANSAT25G3489 Cannabis sativa HOM05D008636 ORTHO05D000137 3.3e-32 142.1 143 54.5
CANSAT56G1233 Cannabis sativa HOM05D008636 ORTHO05D000137 3.3e-32 142.1 144 54.9
CANSAT01G2792 Cannabis sativa HOM05D008636 ORTHO05D000137 1.1e-30 137.1 109 61.5
CANSAT54G2329 Cannabis sativa HOM05D008636 ORTHO05D000137 1.1e-30 137.1 109 61.5
CANSAT54G0660 Cannabis sativa HOM05D008636 ORTHO05D000137 1.4e-30 136.7 109 61.5
CANSAT35G0078 Cannabis sativa HOM05D008636 ORTHO05D000137 1.5e-27 126.7 131 53.4
CANSAT64G2498 Cannabis sativa HOM05D008636 ORTHO05D000137 8.0e-26 120.9 124 53.2
CANSAT25G0646 Cannabis sativa HOM05D008636 ORTHO05D000137 7.5e-24 114.4 97 58.8
CANSAT80G1627 Cannabis sativa HOM05D008636 ORTHO05D000137 7.5e-24 114.4 97 58.8
CANSAT11G0828 Cannabis sativa HOM05D008636 ORTHO05D000137 1.3e-20 103.6 124 49.2
CANSAT21G0297 Cannabis sativa HOM05D008897 ORTHO05D014793 1.3e-20 103.6 149 38.3
CANSAT21G1153 Cannabis sativa HOM05D008897 ORTHO05D000137 1.3e-20 103.6 149 38.3
CANSAT54G0249 Cannabis sativa HOM05D008897 ORTHO05D000137 1.3e-20 103.6 149 38.3
CANSAT56G3280 Cannabis sativa HOM05D008897 ORTHO05D000137 1.3e-20 103.6 149 38.3
CANSAT80G0664 Cannabis sativa HOM05D008897 ORTHO05D000137 1.3e-20 103.6 149 38.3
CANSAT80G2560 Cannabis sativa HOM05D008897 ORTHO05D000137 1.3e-20 103.6 149 38.3
CANSAT56G0181 Cannabis sativa HOM05D008897 ORTHO05D014793 2.9e-20 102.4 149 38.3
CANSAT78G1896 Cannabis sativa HOM05D008897 ORTHO05D000137 8.6e-20 100.9 149 37.6
CANSAT21G0433 Cannabis sativa HOM05D008897 ORTHO05D000016 1.1e-19 100.5 149 37.6
DCAR_010080 Daucus carota HOM05D000679 ORTHO05D000137 6.1e-18 94.7 132 42.4
CANSAT35G1468 Cannabis sativa HOM05D008897 ORTHO05D000137 8.0e-18 94.4 149 35.6
CANSAT78G2148 Cannabis sativa HOM05D008897 ORTHO05D000137 1.4e-17 93.6 110 41.8
CANSAT54G1268 Cannabis sativa HOM05D008897 ORTHO05D000137 1.3e-15 87.0 96 40.6
Nitab4.5_0007904g0010 Nicotiana tabacum HOM05D008636 ORTHO05D000137 2.8e-15 85.9 133 36.8
DCAR_018395 Daucus carota HOM05D000679 ORTHO05D000137 6.3e-15 84.7 133 38.3
CANSAT01G2866 Cannabis sativa HOM05D008897 ORTHO05D014793 1.1e-14 84.0 136 35.3
CANSAT01G2590 Cannabis sativa HOM05D008897 ORTHO05D000137 4.1e-14 82.0 134 35.8
CANSAT11G1535 Cannabis sativa HOM05D008636 ORTHO05D000137 1.6e-13 80.1 105 47.6
CANSAT54G0513 Cannabis sativa HOM05D008636 ORTHO05D000137 3.5e-13 79.0 137 36.5
CANSAT35G0999 Cannabis sativa HOM05D008721 ORTHO05D000137 7.8e-13 77.8 43 95.3
Nitab4.5_0005355g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.3e-12 76.3 134 36.6
SGA_v2.0_scaffold276G46661 Striga asiatica HOM05D000679 ORTHO05D000137 1.9e-11 73.2 162 29.6
SGA_v2.0_scaffold59G20643 Striga asiatica HOM05D000679 ORTHO05D000137 2.5e-11 72.8 162 29.6
CANSAT25G1234 Cannabis sativa HOM05D023333 ORTHO05D000137 4.3e-11 72.0 138 31.9
Sopen00g005360 Solanum pennellii HOM05D000541 ORTHO05D000137 4.3e-11 72.0 139 32.4
Sopen06g003040 Solanum pennellii HOM05D000679 ORTHO05D000137 4.3e-11 72.0 137 34.3
Sopen09g026450 Solanum pennellii HOM05D000679 ORTHO05D000137 4.3e-11 72.0 137 34.3
Sopen12g007430 Solanum pennellii HOM05D000679 ORTHO05D000137 4.3e-11 72.0 137 34.3
CANSAT25G0378 Cannabis sativa HOM05D000679 ORTHO05D000137 2.8e-10 69.3 94 31.9
CANSAT64G1718 Cannabis sativa HOM05D017160 ORTHO05D000137 2.8e-10 69.3 94 31.9
Sopen01g017990 Solanum pennellii HOM05D000541 ORTHO05D000137 2.8e-10 69.3 139 31.7
Sopen05g020660 Solanum pennellii HOM05D000541 ORTHO05D000137 2.8e-10 69.3 139 31.7
CANSAT11G1407 Cannabis sativa HOM05D008636 ORTHO05D000137 6.1e-10 68.2 85 48.2
CANSAT80G0147 Cannabis sativa HOM05D017160 ORTHO05D000137 6.1e-10 68.2 136 30.1
SGA_v2.0_scaffold2G00971 Striga asiatica HOM05D000679 ORTHO05D000137 6.1e-10 68.2 102 38.2
CANSAT25G3069 Cannabis sativa HOM05D008636 ORTHO05D000482 8.0e-10 67.8 85 48.2
SGA_v2.0_scaffold1G00046 Striga asiatica HOM05D000679 ORTHO05D000137 8.0e-10 67.8 93 39.8
Nitab4.5_0000571g0200 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.0e-09 67.4 149 32.2
PGSC0003DMG400008245 Solanum tuberosum HOM05D011278 ORTHO05D014267 1.0e-09 67.4 146 32.9
CANSAT56G0417 Cannabis sativa HOM05D008636 ORTHO05D000137 1.4e-09 67.0 85 48.2
Nitab4.5_0013951g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.4e-09 67.0 87 39.1
CANSAT35G0046 Cannabis sativa HOM05D000679 ORTHO05D000137 2.3e-09 66.2 28 96.4
CANSAT56G1504 Cannabis sativa HOM05D000679 ORTHO05D000137 2.3e-09 66.2 28 96.4
CANSAT80G0150 Cannabis sativa HOM05D002262 ORTHO05D000482 2.3e-09 66.2 85 47.1
Sopen01g014180 Solanum pennellii HOM05D000679 ORTHO05D000137 2.3e-09 66.2 146 35.6
CANSAT54G1484 Cannabis sativa HOM05D000679 ORTHO05D000137 3.1e-09 65.9 134 31.3
Nitab4.5_0002279g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 4.0e-09 65.5 145 30.3
Sopen00g004650 Solanum pennellii HOM05D000679 ORTHO05D000137 5.2e-09 65.1 148 33.1
Sopen10g028350 Solanum pennellii HOM05D000679 ORTHO05D000137 6.8e-09 64.7 144 32.6
Sopen06g029680 Solanum pennellii HOM05D000679 ORTHO05D000137 8.9e-09 64.3 144 31.9
SGA_v2.0_scaffold240G44055 Striga asiatica HOM05D000679 ORTHO05D000137 8.9e-09 64.3 93 39.8
CAN.G165.29 Capsicum annuum HOM05D000541 ORTHO05D000137 1.2e-08 63.9 138 30.4
Nitab4.5_0001425g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.2e-08 63.9 133 33.1
Nitab4.5_0004308g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 1.2e-08 63.9 148 29.1
DCAR_024959 Daucus carota HOM05D000679 ORTHO05D000137 1.5e-08 63.5 106 34.0
Sopen12g021510 Solanum pennellii HOM05D000679 ORTHO05D000137 1.5e-08 63.5 70 45.7
CANSAT54G2098 Cannabis sativa HOM05D000679 ORTHO05D000137 3.4e-08 62.4 133 27.8
CANSAT54G2653 Cannabis sativa HOM05D000679 ORTHO05D000137 3.4e-08 62.4 133 27.8
CANSAT56G0862 Cannabis sativa HOM05D000679 ORTHO05D000137 3.4e-08 62.4 133 27.8
Nitab4.5_0000477g0030 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.4e-08 62.4 142 28.9
CANSAT80G2652 Cannabis sativa HOM05D023333 ORTHO05D000137 4.4e-08 62.0 138 29.7
CAN.G53.24 Capsicum annuum HOM05D000679 ORTHO05D000137 4.4e-08 62.0 80 37.5
Nitab4.5_0000697g0240 Nicotiana tabacum HOM05D005063 ORTHO05D010498 4.4e-08 62.0 145 29.7
Nitab4.5_0002373g0140 Nicotiana tabacum HOM05D000679 ORTHO05D000137 4.4e-08 62.0 87 33.3
Sopen07g017260 Solanum pennellii HOM05D000679 ORTHO05D000137 4.4e-08 62.0 70 44.3
Nitab4.5_0001889g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 5.8e-08 61.6 94 36.2
Sopen12g024090 Solanum pennellii HOM05D000679 ORTHO05D000137 5.8e-08 61.6 148 32.4
Nitab4.5_0019772g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 7.5e-08 61.2 148 28.4
SGA_v2.0_scaffold76G25157 Striga asiatica HOM05D002262 ORTHO05D000137 7.5e-08 61.2 49 51.0
CAN.G1862.3 Capsicum annuum HOM05D000361 ORTHO05D000137 9.8e-08 60.8 148 30.4
Sopen05g027230 Solanum pennellii HOM05D000002 ORTHO05D000001 9.8e-08 60.8 62 41.9
Nitab4.5_0001173g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.3e-07 60.5 145 29.0
Nitab4.5_0002414g0070 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.3e-07 60.5 117 35.9
Nitab4.5_0008647g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.3e-07 60.5 93 35.5
Nitab4.5_0010618g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.3e-07 60.5 87 34.5
SGA_v2.0_scaffold67G22584 Striga asiatica HOM05D000679 ORTHO05D000137 1.3e-07 60.5 93 38.7
Sopen05g027730 Solanum pennellii HOM05D000679 ORTHO05D000137 1.7e-07 60.1 70 44.3
CANSAT56G1481 Cannabis sativa HOM05D009472 ORTHO05D000482 2.9e-07 59.3 135 32.6
ATR0614G001 Amborella trichopoda HOM05D008897 ORTHO05D014793 3.7e-07 58.9 91 37.4
Nitab4.5_0005654g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.7e-07 58.9 88 34.1
Nitab4.5_0006179g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.7e-07 58.9 73 38.4
CAN.G1316.3 Capsicum annuum HOM05D000679 ORTHO05D000137 6.4e-07 58.2 112 28.6
Nitab4.5_0001109g0050 Nicotiana tabacum HOM05D008108 ORTHO05D011004 6.4e-07 58.2 92 33.7
CAN.G453.11 Capsicum annuum HOM05D000679 ORTHO05D000137 8.3e-07 57.8 69 39.1
Nitab4.5_0023553g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 8.3e-07 57.8 79 36.7
Sopen05g026050 Solanum pennellii HOM05D000679 ORTHO05D000137 8.3e-07 57.8 134 29.1
CANSAT80G2874 Cannabis sativa HOM05D008897 ORTHO05D000137 1.1e-06 57.4 91 36.3
Nitab4.5_0006628g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.1e-06 57.4 88 34.1
Nitab4.5_0008752g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.1e-06 57.4 73 37.0
Nitab4.5_0011972g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000137 1.1e-06 57.4 93 34.4
PGSC0003DMG400014993 Solanum tuberosum HOM05D000541 ORTHO05D000137 1.1e-06 57.4 139 28.1
Sopen12g022620 Solanum pennellii HOM05D010988 ORTHO05D000137 1.4e-06 57.0 147 29.9
Sopen12g024080 Solanum pennellii HOM05D000679 ORTHO05D000137 1.4e-06 57.0 50 52.0
PGSC0003DMG400011887 Solanum tuberosum HOM05D000541 ORTHO05D000137 1.4e-06 57.0 139 28.1
Nitab4.5_0002879g0090 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.9e-06 56.6 73 35.6
CAN.G1245.5 Capsicum annuum HOM05D000679 ORTHO05D000137 2.4e-06 56.2 79 32.9
CAN.G568.8 Capsicum annuum HOM05D000541 ORTHO05D000137 2.4e-06 56.2 136 30.1
CAN.G639.25 Capsicum annuum HOM05D000679 ORTHO05D000137 2.4e-06 56.2 80 35.0
Sopen05g031060 Solanum pennellii HOM05D009268 ORTHO05D011733 2.4e-06 56.2 147 28.6
Sopen06g017270 Solanum pennellii HOM05D009268 ORTHO05D011733 2.4e-06 56.2 147 28.6
Sopen09g021100 Solanum pennellii HOM05D009268 ORTHO05D011733 2.4e-06 56.2 147 28.6
PGSC0003DMG400020014 Solanum tuberosum HOM05D000541 ORTHO05D000137 2.4e-06 56.2 139 28.8
CAN.G1344.11 Capsicum annuum HOM05D000679 ORTHO05D000482 3.2e-06 55.8 50 44.0
Nitab4.5_0000902g0220 Nicotiana tabacum HOM05D002262 ORTHO05D000137 3.2e-06 55.8 146 30.1
PGSC0003DMG400044701 Solanum tuberosum HOM05D000541 ORTHO05D000137 3.2e-06 55.8 139 29.5
Nitab4.5_0010898g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000137 4.1e-06 55.5 93 33.3
Sopen02g006090 Solanum pennellii HOM05D000541 ORTHO05D000137 4.1e-06 55.5 139 29.5
Sopen02g028490 Solanum pennellii HOM05D000541 ORTHO05D000137 4.1e-06 55.5 139 29.5
Sopen04g016430 Solanum pennellii HOM05D000541 ORTHO05D000137 4.1e-06 55.5 139 29.5
Sopen04g016450 Solanum pennellii HOM05D000541 ORTHO05D000137 4.1e-06 55.5 139 29.5
Sopen11g022980 Solanum pennellii HOM05D000679 ORTHO05D000137 4.1e-06 55.5 63 44.4
Nitab4.5_0004917g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 5.4e-06 55.1 87 32.2
Sopen01g030890 Solanum pennellii HOM05D000679 ORTHO05D000137 5.4e-06 55.1 62 45.2
DCAR_029854 Daucus carota HOM05D002749 ORTHO05D000137 7.0e-06 54.7 50 42.0
Nitab4.5_0000665g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 7.0e-06 54.7 137 30.7
Nitab4.5_0009434g0020 Nicotiana tabacum HOM05D008108 ORTHO05D011004 7.0e-06 54.7 92 31.5
SGA_v2.0_scaffold23G10125 Striga asiatica HOM05D000679 ORTHO05D000137 7.0e-06 54.7 75 36.0
Nitab4.5_0000425g0130 Nicotiana tabacum HOM05D000679 ORTHO05D000137 9.2e-06 54.3 50 44.0
SGA_v2.0_scaffold2471G54126 Striga asiatica HOM05D000679 ORTHO05D000137 9.2e-06 54.3 89 36.0


User provided reference genes

Program Settings