Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G2942 Cannabis sativa HOM05D004438 ORTHO05D005256 1.1e-68 263.1 126 100.0
MD03G1238400 Malus domestica HOM05D004438 ORTHO05D005256 4.1e-63 244.6 122 95.1
MD15G1340400 Malus domestica HOM05D004438 ORTHO05D005256 7.7e-62 240.4 123 92.7
Prupe.6G170300 Prunus persica HOM05D004438 ORTHO05D005256 1.7e-61 239.2 124 91.1
Cpa.g.sc21.8 Carica papaya HOM05D004438 ORTHO05D005256 2.9e-61 238.4 124 91.9
Duzib187G1770 Durio zibethinus HOM05D004438 ORTHO05D005256 2.9e-61 238.4 124 90.3
Gohir.A11G197600 Gossypium hirsutum HOM05D004438 ORTHO05D005256 2.9e-61 238.4 124 90.3
MD15G1331400 Malus domestica HOM05D004438 ORTHO05D005256 2.9e-61 238.4 122 93.4
QL06p031963 Quercus lobata HOM05D004438 ORTHO05D005256 5.0e-61 237.7 123 91.9
RcHm_v2.0_Chr2g0117091 Rosa chinensis HOM05D004438 ORTHO05D005256 5.0e-61 237.7 122 91.8
Gorai.007G245000 Gossypium raimondii HOM05D004438 ORTHO05D005256 6.6e-61 237.3 124 89.5
Prupe.4G171500 Prunus persica HOM05D004438 ORTHO05D005256 6.6e-61 237.3 122 91.8
Cfa002762 Carpinus fangiana HOM05D004438 ORTHO05D005256 1.5e-60 236.1 123 91.9
ClCG01G016040 Citrullus lanatus HOM05D004438 ORTHO05D005256 1.9e-60 235.7 124 87.9
Haze_25054 Corylus avellana HOM05D004438 ORTHO05D005256 1.9e-60 235.7 121 93.4
FvH4_1g22770 Fragaria vesca HOM05D004438 ORTHO05D005256 2.5e-60 235.3 122 91.0
FAN19G1036 Fragaria x ananassa HOM05D004438 ORTHO05D005256 2.5e-60 235.3 122 91.0
FAN23G1009 Fragaria x ananassa HOM05D004438 ORTHO05D005256 2.5e-60 235.3 122 91.0
FAN26G1829 Fragaria x ananassa HOM05D004438 ORTHO05D005256 2.5e-60 235.3 122 91.0
FAN28G0942 Fragaria x ananassa HOM05D004438 ORTHO05D005256 2.5e-60 235.3 122 91.0
CiPaw.03G133700 Carya illinoinensis HOM05D004438 ORTHO05D005256 3.3e-60 235.0 123 90.2
COL.COLO4_11000 Corchorus olitorius HOM05D004438 ORTHO05D005256 3.3e-60 235.0 124 89.5
Thecc.01G114400 Theobroma cacao HOM05D004438 ORTHO05D005256 9.5e-60 233.4 124 89.5
Gohir.A11G053800 Gossypium hirsutum HOM05D004438 ORTHO05D005256 1.2e-59 233.0 127 85.0
Gohir.D11G231900 Gossypium hirsutum HOM05D004438 ORTHO05D005256 1.6e-59 232.6 124 88.7
Phvul.L002244 Phaseolus vulgaris HOM05D004438 ORTHO05D005256 1.6e-59 232.6 121 90.9
VMungo0720G0202 Vigna mungo HOM05D004438 ORTHO05D005256 1.6e-59 232.6 121 90.9
Gohir.D11G057300 Gossypium hirsutum HOM05D004438 ORTHO05D005256 2.1e-59 232.3 127 85.0
TWI53G0984 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 2.1e-59 232.3 121 90.9
Rhsim10G0149000 Rhododendron simsii HOM05D004438 ORTHO05D005256 2.8e-59 231.9 123 89.4
QL01p009111 Quercus lobata HOM05D004438 ORTHO05D005256 3.6e-59 231.5 123 90.2
CsaV3_6G042320 Cucumis sativus L. HOM05D004438 ORTHO05D005256 6.1e-59 230.7 124 85.5
Solyc04g051710.2 Solanum lycopersicum HOM05D004438 ORTHO05D005256 8.0e-59 230.3 123 86.2
Sopen04g023090 Solanum pennellii HOM05D004438 ORTHO05D005256 8.0e-59 230.3 123 86.2
Actinidia06107 Actinidia chinensis HOM05D004438 ORTHO05D005256 1.0e-58 229.9 123 87.8
Peaxi162Scf00106g00162 Petunia axillaris HOM05D004438 ORTHO05D005256 1.0e-58 229.9 123 86.2
Gohir.A10G084200 Gossypium hirsutum HOM05D004438 ORTHO05D005256 1.4e-58 229.6 124 86.3
MBI11_g03707_MAGBIO Magnolia biondii HOM05D004438 ORTHO05D005256 1.4e-58 229.6 124 86.3
Oeu027202.1 Olea europaea HOM05D004438 ORTHO05D005256 1.4e-58 229.6 123 87.0
PSO541G1989 Papaver somniferum HOM05D004438 ORTHO05D005256 1.4e-58 229.6 124 86.3
Gorai.011G114100 Gossypium raimondii HOM05D004438 ORTHO05D005256 1.8e-58 229.2 124 86.3
PGSC0003DMG400031197 Solanum tuberosum HOM05D004438 ORTHO05D005256 1.8e-58 229.2 123 85.4
MELO3C007474.2 Cucumis melo HOM05D004438 ORTHO05D005256 4.0e-58 228.0 124 85.5
Glyma.01G200000 Glycine max HOM05D004438 ORTHO05D005256 4.0e-58 228.0 121 89.3
RcHm_v2.0_Chr5g0031621 Rosa chinensis HOM05D000965 ORTHO05D000842 4.0e-58 228.0 120 88.3
AL8G42290 Arabidopsis lyrata HOM05D004438 ORTHO05D005256 5.2e-58 227.6 123 86.2
AT5G64816 Arabidopsis thaliana HOM05D004438 ORTHO05D005256 5.2e-58 227.6 123 86.2
Dinv42684 Davidia involucrata HOM05D004438 ORTHO05D005256 5.2e-58 227.6 123 87.0
Gohir.D10G104600 Gossypium hirsutum HOM05D004438 ORTHO05D005256 5.2e-58 227.6 124 85.5
Sed0014495 Sechium edule HOM05D004438 ORTHO05D005256 5.2e-58 227.6 123 85.4
Glyma.10G190000 Glycine max HOM05D004438 ORTHO05D005256 8.9e-58 226.9 121 89.3
TWI74G1039 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 8.9e-58 226.9 119 89.9
Cc10_g15830 Coffea canephora HOM05D004438 ORTHO05D005256 1.2e-57 226.5 123 87.8
Lalb_Chr02g0150651 Lupinus albus HOM05D004438 ORTHO05D005256 1.2e-57 226.5 121 88.4
PSO675G7198 Papaver somniferum HOM05D004438 ORTHO05D005256 1.2e-57 226.5 124 85.5
SGA_v2.0_scaffold79G25619 Striga asiatica HOM05D004438 ORTHO05D005256 1.2e-57 226.5 123 84.6
THA.LOC104799304 Tarenaya hassleriana HOM05D004438 ORTHO05D005256 1.2e-57 226.5 123 87.0
Ah.02g126620 Amaranthus hybridus HOM05D004438 ORTHO05D005256 1.5e-57 226.1 123 86.2
MSTRG.9937 Avicennia marina HOM05D004438 ORTHO05D005256 1.5e-57 226.1 123 85.4
CSS0020413 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 1.5e-57 226.1 123 86.2
Sed0003177 Sechium edule HOM05D004438 ORTHO05D005256 2.0e-57 225.7 123 85.4
Glyma.20G200800 Glycine max HOM05D004438 ORTHO05D005256 2.6e-57 225.3 121 86.8
Carub.0008s2564 Capsella rubella HOM05D004438 ORTHO05D005256 3.4e-57 224.9 123 86.2
Migut.N00230 Erythranthe guttata HOM05D004438 ORTHO05D005256 4.4e-57 224.6 123 85.4
CARHR278820 Cardamine hirsuta HOM05D004438 ORTHO05D005256 5.7e-57 224.2 123 85.4
AUR62027160 Chenopodium quinoa HOM05D004438 ORTHO05D005256 7.5e-57 223.8 121 87.6
AUR62044399 Chenopodium quinoa HOM05D004438 ORTHO05D005256 7.5e-57 223.8 121 87.6
Lj5g0016992 Lotus japonicus HOM05D004438 ORTHO05D005256 1.3e-56 223.0 121 87.6
Os03g0185600 Oryza sativa ssp. japonica HOM05D004438 ORTHO05D005256 1.3e-56 223.0 123 84.6
SalBow3G3218 Salvia bowleyana HOM05D004438 ORTHO05D005256 1.3e-56 223.0 123 83.7
Dinv19477 Davidia involucrata HOM05D004438 ORTHO05D005256 1.7e-56 222.6 122 86.1
Nitab4.5_0003709g0100 Nicotiana tabacum HOM05D004438 ORTHO05D005256 1.7e-56 222.6 123 85.4
Medtr1g073620 Medicago truncatula HOM05D004438 ORTHO05D005256 2.2e-56 222.2 121 86.0
Peaxi162Scf00979g00008 Petunia axillaris HOM05D004438 ORTHO05D005256 2.2e-56 222.2 123 86.2
Thhalv10005124m.g Eutrema salsugineum HOM05D004438 ORTHO05D005256 2.9e-56 221.9 123 84.6
Psat6g129880 Pisum sativum HOM05D004438 ORTHO05D005256 2.9e-56 221.9 121 86.0
TPR.G28848 Trifolium pratense HOM05D004438 ORTHO05D005256 2.9e-56 221.9 121 86.8
TAR625G0091 Trochodendron aralioides HOM05D004438 ORTHO05D005256 2.9e-56 221.9 124 82.3
BcaB02g09832 Brassica carinata HOM05D004438 ORTHO05D005256 3.7e-56 221.5 123 84.6
BcaC01g02715 Brassica carinata HOM05D004438 ORTHO05D005256 3.7e-56 221.5 123 84.6
A06p31610 Brassica napus HOM05D004438 ORTHO05D005256 3.7e-56 221.5 123 84.6
C03p61350 Brassica napus HOM05D004438 ORTHO05D005256 3.7e-56 221.5 123 84.6
BolC3t18395H Brassica oleracea HOM05D004438 ORTHO05D005256 3.7e-56 221.5 123 84.6
BraA06t26098Z Brassica rapa HOM05D004438 ORTHO05D005256 3.7e-56 221.5 123 84.6
Nitab4.5_0000131g0360 Nicotiana tabacum HOM05D004438 ORTHO05D005256 3.7e-56 221.5 123 84.6
Potri.002G105400 Populus trichocarpa HOM05D004438 ORTHO05D005256 3.7e-56 221.5 123 86.2
Sp2g27890 Schrenkiella parvula HOM05D004438 ORTHO05D005256 3.7e-56 221.5 123 84.6
TAR381G0625 Trochodendron aralioides HOM05D004438 ORTHO05D005256 4.9e-56 221.1 124 83.9
Ah.03g137490 Amaranthus hybridus HOM05D004438 ORTHO05D005256 6.4e-56 220.7 123 82.1
Potri.005G156400 Populus trichocarpa HOM05D004438 ORTHO05D005256 6.4e-56 220.7 123 86.2
CAN.G344.10 Capsicum annuum HOM05D004438 ORTHO05D005256 1.1e-55 219.9 123 82.1
Eucgr.F02140 Eucalyptus grandis HOM05D004438 ORTHO05D005256 1.1e-55 219.9 123 83.7
vmacro18638 Vaccinium macrocarpon HOM05D004438 ORTHO05D005256 1.4e-55 219.5 123 84.6
DCAR_009568 Daucus carota HOM05D004438 ORTHO05D005256 3.2e-55 218.4 123 83.7
SGA_v2.0_scaffold308G48110 Striga asiatica HOM05D004438 ORTHO05D005256 3.2e-55 218.4 123 81.3
TAR625G0287 Trochodendron aralioides HOM05D004438 ORTHO05D005256 4.1e-55 218.0 123 83.7
Sopen00g011470 Solanum pennellii HOM05D004438 ORTHO05D005256 5.4e-55 217.6 123 83.7
SalBow2G1806 Salvia bowleyana HOM05D004438 ORTHO05D005256 7.0e-55 217.2 127 79.5
CAN.G475.35 Capsicum annuum HOM05D004438 ORTHO05D005256 9.2e-55 216.9 123 85.4
THA.LOC104819312 Tarenaya hassleriana HOM05D004438 ORTHO05D005256 9.2e-55 216.9 123 82.9
Zm00001eb006400 Zea mays HOM05D004438 ORTHO05D005256 9.2e-55 216.9 123 82.1
Solyc04g076260.2 Solanum lycopersicum HOM05D004438 ORTHO05D005256 1.2e-54 216.5 123 83.7
Lsat_1_v5_gn_8_150501 Lactuca sativa HOM05D004438 ORTHO05D005256 1.6e-54 216.1 123 84.6
Aqoxy2G01099 Aquilegia oxysepala HOM05D004438 ORTHO05D005256 2.0e-54 215.7 123 82.1
DCAR_009565 Daucus carota HOM05D004438 ORTHO05D005256 2.0e-54 215.7 123 82.9
Nitab4.5_0000184g0290 Nicotiana tabacum HOM05D004438 ORTHO05D005256 3.5e-54 214.9 115 86.1
Zm00001eb401580 Zea mays HOM05D004438 ORTHO05D005256 3.5e-54 214.9 123 81.3
Atru.chr13.1020 Acer truncatum HOM05D004438 ORTHO05D005256 4.6e-54 214.5 123 82.1
Ciclev10002841m.g Citrus clementina HOM05D004438 ORTHO05D005256 5.9e-54 214.2 123 82.1
ECA233G2293 Erigeron canadensis HOM05D004438 ORTHO05D005256 5.9e-54 214.2 123 84.6
GSVIVG01009169001 Vitis vinifera HOM05D004438 ORTHO05D005256 7.8e-54 213.8 124 82.3
HanXRQChr12g0372061 Helianthus annuus HOM05D004438 ORTHO05D005256 1.3e-53 213.0 123 82.9
PGSC0003DMG400009364 Solanum tuberosum HOM05D004438 ORTHO05D005256 1.3e-53 213.0 123 82.9
Psat7g208520 Pisum sativum HOM05D004438 ORTHO05D005256 2.3e-53 212.2 121 82.6
Nn5g29898 Nelumbo nucifera HOM05D004438 ORTHO05D005256 6.6e-53 210.7 123 82.1
HPP92_015825 Vanilla planifolia HOM05D004438 ORTHO05D005256 6.6e-53 210.7 122 80.3
Aa31LG1G17110 Aethionema arabicum HOM05D004438 ORTHO05D005256 8.6e-53 210.3 123 80.5
Manes.10G131700 Manihot esculenta HOM05D004438 ORTHO05D005256 1.1e-52 209.9 123 81.3
Sc03g0004400 Simmondsia chinensis HOM05D004438 ORTHO05D005256 2.5e-52 208.8 115 83.5
unitig_699.g19132 Utricularia gibba HOM05D004438 ORTHO05D005256 4.3e-52 208.0 123 77.2
FvH4_3g18771 Fragaria vesca HOM05D004438 ORTHO05D005256 5.6e-52 207.6 114 86.0
Gorai.007G062500 Gossypium raimondii HOM05D004438 ORTHO05D005256 5.6e-52 207.6 127 79.5
Lalb_Chr21g0312471 Lupinus albus HOM05D004438 ORTHO05D005256 3.1e-50 201.8 118 82.2
Manes.02G145100 Manihot esculenta HOM05D004438 ORTHO05D005256 4.0e-50 201.4 110 90.0
Sc23g0000680 Simmondsia chinensis HOM05D004438 ORTHO05D005256 1.2e-49 199.9 123 78.9
Sabra02G0082700 Salix brachista HOM05D004438 ORTHO05D005256 1.5e-49 199.5 112 85.7
Nitab4.5_0004977g0040 Nicotiana tabacum HOM05D004438 ORTHO05D005256 2.6e-49 198.7 107 86.9
Sabra05G0119900 Salix brachista HOM05D004438 ORTHO05D005256 7.5e-49 197.2 112 84.8
Nn1g08461 Nelumbo nucifera HOM05D004438 ORTHO05D005256 2.9e-48 195.3 103 89.3
CDE02G2078 Ceratophyllum demersum HOM05D004438 ORTHO05D005256 3.7e-48 194.9 112 83.9
ATR1132G028 Amborella trichopoda HOM05D004438 ORTHO05D005256 6.4e-48 194.1 126 77.8
EL10Ac6g13106 Beta vulgaris HOM05D004438 ORTHO05D005256 6.4e-48 194.1 107 86.0
FAN16G1755 Fragaria x ananassa HOM05D004438 ORTHO05D005256 2.4e-47 192.2 107 85.0
Duzib264G0014 Durio zibethinus HOM05D004438 ORTHO05D005256 1.2e-46 189.9 101 91.1
TWI56G0149 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 2.3e-45 185.7 124 75.0
Migut.G00404 Erythranthe guttata HOM05D004438 ORTHO05D005256 5.0e-45 184.5 131 70.2
FAN11G0727 Fragaria x ananassa HOM05D000965 ORTHO05D000842 1.2e-43 179.9 98 85.7
SHI31196 Sapria himalayana HOM05D004438 ORTHO05D005256 2.8e-43 178.7 122 67.2
FAN21G3234 Fragaria x ananassa HOM05D000965 ORTHO05D000842 6.2e-43 177.6 98 83.7
Nitab4.5_0004977g0030 Nicotiana tabacum HOM05D004438 ORTHO05D005256 8.9e-42 173.7 86 89.5
Oeu028520.2 Olea europaea HOM05D004438 ORTHO05D005256 2.2e-40 169.1 102 82.4
CSS0036861 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 4.1e-39 164.9 127 66.1
Mapoly0031s0095 Marchantia polymorpha HOM05D004438 ORTHO05D005256 9.2e-39 163.7 120 65.8
SEGI_36857 Sequoiadendron giganteum HOM05D004438 ORTHO05D005256 9.2e-39 163.7 88 81.8
Rhsim08G0005900 Rhododendron simsii HOM05D004438 ORTHO05D005256 3.0e-37 158.7 102 76.5
AagrBONN_evm.TU.Sc2ySwM_117.295 Anthoceros agrestis HOM05D004438 ORTHO05D005256 5.1e-37 157.9 124 58.9
Pp3c22_12110 Physcomitrium patens HOM05D004438 ORTHO05D005256 3.3e-36 155.2 120 60.8
COL.COLO4_35234 Corchorus olitorius HOM05D004438 ORTHO05D005256 4.3e-36 154.8 131 63.4
Gohir.1Z049407 Gossypium hirsutum HOM05D004438 ORTHO05D005256 6.8e-34 147.5 89 79.8
AagrBONN_evm.TU.Sc2ySwM_344.1988 Anthoceros agrestis HOM05D004438 ORTHO05D005256 1.2e-30 136.7 124 51.6
Pp3c19_18370 Physcomitrium patens HOM05D004438 ORTHO05D005256 3.5e-30 135.2 119 53.8
SEGI_35678 Sequoiadendron giganteum HOM05D004438 ORTHO05D005256 5.1e-29 131.3 120 52.5
CSS0034319 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 4.7e-27 124.8 111 56.8
arahy.Tifrunner.gnm1.ann1.7JV24P Arachis hypogaea HOM05D004438 ORTHO05D005256 2.4e-26 122.5 57 93.0
CSS0009061 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 3.1e-26 122.1 108 56.5
PRCOL_00001176 Prasinoderma coloniale HOM05D004438 ORTHO05D005256 7.1e-23 110.9 75 58.7
CiPaw.04G091100 Carya illinoinensis HOM05D004438 ORTHO05D005256 7.8e-22 107.5 62 87.1
MCO08G336 Micromonas commoda HOM05D004438 ORTHO05D005256 5.1e-21 104.8 105 49.5
ATR0049G041 Amborella trichopoda HOM05D004438 ORTHO05D005256 4.3e-20 101.7 119 44.5
Cre07.g313800 Chlamydomonas reinhardtii HOM05D004438 ORTHO05D005256 1.3e-19 100.1 74 56.8
CSS0036545 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 2.4e-15 85.9 43 88.4
Hund21738 Selenicereus undatus HOM05D004438 ORTHO05D005256 9.6e-12 73.9 35 94.3
SalBow2G3602 Salvia bowleyana HOM05D004438 ORTHO05D005256 5.8e-09 64.7 32 84.4
CBR_g51299 Chara braunii HOM05D004438 ORTHO05D005256 6.4e-08 61.2 35 74.3
SalBow1G8643 Salvia bowleyana HOM05D000379 ORTHO05D000254 1.1e-07 60.5 33 75.8


User provided reference genes

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