Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G2845 Cannabis sativa HOM05D006862 ORTHO05D008726 1.3e-126 456.4 236 100.0
TAR381G1571 Trochodendron aralioides HOM05D006862 ORTHO05D008726 1.8e-99 366.3 236 77.5
Dinv32268 Davidia involucrata HOM05D006862 ORTHO05D005283 2.3e-99 365.9 236 77.1
Hma1.2p1_0341F.1_g130400 Hydrangea macrophylla HOM05D006862 ORTHO05D008726 1.9e-98 362.8 236 76.7
QL12p036953 Quercus lobata HOM05D006862 ORTHO05D008726 3.3e-98 362.1 235 74.5
Duzib093G2032 Durio zibethinus HOM05D006862 ORTHO05D008726 2.1e-97 359.4 233 76.0
CSS0002443 Camellia sinensis var. sinensis HOM05D006862 ORTHO05D008726 4.8e-97 358.2 236 76.3
Prupe.1G518300 Prunus persica HOM05D006862 ORTHO05D008726 2.4e-96 355.9 235 75.7
CSS0011508 Camellia sinensis var. sinensis HOM05D006862 ORTHO05D008726 4.0e-96 355.1 236 76.3
Actinidia33490 Actinidia chinensis HOM05D006862 ORTHO05D008726 2.6e-95 352.4 236 73.7
CiPaw.08G045700 Carya illinoinensis HOM05D006862 ORTHO05D008726 2.6e-95 352.4 236 72.9
Gorai.002G140500 Gossypium raimondii HOM05D006862 ORTHO05D008726 7.6e-95 350.9 233 74.2
Thecc.08G105700 Theobroma cacao HOM05D006862 ORTHO05D008726 7.6e-95 350.9 233 73.0
TWI23G1270 Tripterygium wilfordii HOM05D006862 ORTHO05D008726 1.7e-94 349.7 236 75.0
TWI56G0923 Tripterygium wilfordii HOM05D006862 ORTHO05D008726 2.9e-94 349.0 236 74.6
Gohir.A01G127200 Gossypium hirsutum HOM05D006862 ORTHO05D008726 8.4e-94 347.4 233 72.5
GSVIVG01020916001 Vitis vinifera HOM05D006862 ORTHO05D008726 1.4e-93 346.7 250 69.2
Gohir.D01G114900 Gossypium hirsutum HOM05D006862 ORTHO05D008726 1.9e-93 346.3 233 73.8
Lj7A540T61 Lonicera japonica HOM05D006862 ORTHO05D008726 1.9e-93 346.3 224 75.4
Ciclev10002323m.g Citrus clementina HOM05D006862 ORTHO05D008726 1.2e-92 343.6 236 73.3
MD08G1184100 Malus domestica HOM05D006862 ORTHO05D008726 1.2e-92 343.6 237 73.0
Sed0019597 Sechium edule HOM05D006862 ORTHO05D008726 1.2e-92 343.6 234 70.5
COL.COLO4_16384 Corchorus olitorius HOM05D006862 ORTHO05D008726 2.1e-92 342.8 213 78.9
FAN04G2864 Fragaria x ananassa HOM05D006862 ORTHO05D008726 6.0e-92 341.3 237 72.2
Nn1g05382 Nelumbo nucifera HOM05D006862 ORTHO05D008726 6.0e-92 341.3 239 70.3
Cfa013642 Carpinus fangiana HOM05D006862 ORTHO05D008726 1.0e-91 340.5 211 77.7
FAN13G0737 Fragaria x ananassa HOM05D006862 ORTHO05D008726 1.3e-91 340.1 237 71.7
RcHm_v2.0_Chr7g0238691 Rosa chinensis HOM05D006862 ORTHO05D008726 1.8e-91 339.7 237 72.2
Potri.005G164300 Populus trichocarpa HOM05D006862 ORTHO05D008726 8.7e-91 337.4 230 71.7
Glyma.15G146200 Glycine max HOM05D006862 ORTHO05D008726 1.9e-90 336.3 224 72.3
vmacro13466 Vaccinium macrocarpon HOM05D006862 ORTHO05D008726 1.9e-90 336.3 223 75.8
Eucgr.F00331 Eucalyptus grandis HOM05D006862 ORTHO05D008726 2.5e-90 335.9 236 71.6
FAN18G1242 Fragaria x ananassa HOM05D006862 ORTHO05D008726 2.5e-90 335.9 237 71.7
FvH4_5g37140 Fragaria vesca HOM05D006862 ORTHO05D008726 4.3e-90 335.1 237 71.3
AUR62027770 Chenopodium quinoa HOM05D006862 ORTHO05D008726 9.6e-90 334.0 235 66.8
Glyma.09G040700 Glycine max HOM05D006862 ORTHO05D008726 2.1e-89 332.8 224 71.4
DCAR_031876 Daucus carota HOM05D006862 ORTHO05D008726 6.2e-89 331.3 222 73.0
Manes.18G066800 Manihot esculenta HOM05D006862 ORTHO05D008726 8.2e-89 330.9 236 70.3
Cpa.g.sc36.141 Carica papaya HOM05D006862 ORTHO05D008726 1.1e-88 330.5 223 72.6
MELO3C011029.2 Cucumis melo HOM05D006862 ORTHO05D008726 1.1e-88 330.5 233 69.5
Ca_01890_v3 Cicer arietinum L. HOM05D006862 ORTHO05D008726 1.4e-88 330.1 224 71.0
Sabra05G0123800 Salix brachista HOM05D006862 ORTHO05D008726 1.8e-88 329.7 233 70.0
ClCG08G011130 Citrullus lanatus HOM05D006862 ORTHO05D008726 2.4e-88 329.3 223 70.9
VMungo1309G2304 Vigna mungo HOM05D006862 ORTHO05D008726 2.4e-88 329.3 232 69.0
EL10Ac1g01209 Beta vulgaris HOM05D006862 ORTHO05D008726 9.0e-88 327.4 235 66.4
Aqoxy2G03696 Aquilegia oxysepala HOM05D006862 ORTHO05D008726 1.2e-87 327.0 233 69.1
Phvul.009G253100 Phaseolus vulgaris HOM05D006862 ORTHO05D008726 4.5e-87 325.1 224 70.1
PGR042G4010 Punica granatum HOM05D006862 ORTHO05D008726 7.6e-87 324.3 233 68.7
Oeu009615.1 Olea europaea HOM05D006862 ORTHO05D008726 1.7e-86 323.2 227 70.9
Sc23g0003870 Simmondsia chinensis HOM05D006862 ORTHO05D008726 2.9e-86 322.4 236 66.5
CsaV3_2G029710 Cucumis sativus L. HOM05D006862 ORTHO05D008726 6.5e-86 321.2 233 68.2
Psat1g156880 Pisum sativum HOM05D006862 ORTHO05D008726 1.4e-85 320.1 224 69.2
Hund16900 Selenicereus undatus HOM05D006862 ORTHO05D008726 1.6e-84 316.6 211 72.0
THA.LOC104806470 Tarenaya hassleriana HOM05D006862 ORTHO05D008726 1.6e-84 316.6 237 67.9
Medtr2g035310 Medicago truncatula HOM05D006862 ORTHO05D008726 2.1e-84 316.2 224 68.3
MBI05_g39046_MAGBIO Magnolia biondii HOM05D006862 ORTHO05D008726 2.7e-84 315.8 236 67.4
Atru.chr13.1175 Acer truncatum HOM05D006862 ORTHO05D008726 4.6e-84 315.1 240 65.8
Lalb_Chr18g0059041 Lupinus albus HOM05D006862 ORTHO05D008726 7.9e-84 314.3 230 66.5
Nitab4.5_0003428g0010 Nicotiana tabacum HOM05D006862 ORTHO05D008726 1.0e-83 313.9 234 67.5
MBI05_g44690_MAGBIO Magnolia biondii HOM05D006862 ORTHO05D008726 1.8e-83 313.2 236 66.9
arahy.Tifrunner.gnm1.ann1.ZLG2GC Arachis hypogaea HOM05D006862 ORTHO05D008726 3.0e-83 312.4 228 65.8
TPR.G28474 Trifolium pratense HOM05D006862 ORTHO05D008726 3.9e-83 312.0 224 68.3
PSO447G0083 Papaver somniferum HOM05D006862 ORTHO05D008726 6.7e-83 311.2 235 64.7
Nitab4.5_0000210g0120 Nicotiana tabacum HOM05D006862 ORTHO05D008726 1.5e-82 310.1 234 66.7
MSTRG.28166 Avicennia marina HOM05D006862 ORTHO05D008726 4.3e-82 308.5 237 65.0
Os07g0151300 Oryza sativa ssp. japonica HOM05D006862 ORTHO05D008726 5.7e-82 308.1 225 68.0
Ah.12g052780 Amaranthus hybridus HOM05D006862 ORTHO05D008726 7.4e-82 307.8 230 63.9
arahy.Tifrunner.gnm1.ann1.F2RQ7H Arachis hypogaea HOM05D006862 ORTHO05D008726 1.6e-81 306.6 224 65.6
Sopen10g008800 Solanum pennellii HOM05D006862 ORTHO05D008726 2.8e-81 305.8 237 64.6
PSO210G6562 Papaver somniferum HOM05D006862 ORTHO05D008726 3.1e-80 302.4 239 62.8
Aa31LG6G8550 Aethionema arabicum HOM05D006862 ORTHO05D008726 2.6e-79 299.3 237 62.9
Cc02_g24490 Coffea canephora HOM05D006862 ORTHO05D008726 3.4e-79 298.9 228 68.4
Migut.N01765 Erythranthe guttata HOM05D006862 ORTHO05D008726 4.5e-79 298.5 240 60.8
Sp1g29820 Schrenkiella parvula HOM05D006862 ORTHO05D008726 3.8e-78 295.4 237 61.6
Thhalv10001858m.g Eutrema salsugineum HOM05D006862 ORTHO05D008726 6.5e-78 294.7 237 61.6
AT1G34770 Arabidopsis thaliana HOM05D006862 ORTHO05D008726 3.2e-77 292.4 234 62.0
Carub.0001s3270 Capsella rubella HOM05D006862 ORTHO05D008726 3.2e-77 292.4 237 62.0
BcaB04g17850 Brassica carinata HOM05D006862 ORTHO05D008726 1.2e-76 290.4 237 60.8
HPP92_002325 Vanilla planifolia HOM05D006862 ORTHO05D008726 2.7e-76 289.3 220 62.3
AL1G49800 Arabidopsis lyrata HOM05D006862 ORTHO05D008726 7.9e-76 287.7 239 61.1
BcaC07g37529 Brassica carinata HOM05D006862 ORTHO05D008726 1.0e-75 287.3 237 60.8
BolC8t47847H Brassica oleracea HOM05D006862 ORTHO05D008726 1.0e-75 287.3 237 60.8
Zm00001eb300080 Zea mays HOM05D006862 ORTHO05D008726 1.0e-75 287.3 220 65.0
SGA_v2.0_scaffold43G16518 Striga asiatica HOM05D006862 ORTHO05D008726 1.4e-75 287.0 230 61.7
BraA08t32838Z Brassica rapa HOM05D006862 ORTHO05D008726 2.3e-75 286.2 237 59.9
SalBow5G3922 Salvia bowleyana HOM05D006862 ORTHO05D008726 3.0e-75 285.8 213 65.7
CARHR034040 Cardamine hirsuta HOM05D006862 ORTHO05D008726 3.9e-75 285.4 238 59.7
ECA236G4229 Erigeron canadensis HOM05D006862 ORTHO05D008726 1.5e-74 283.5 236 61.0
A08p08160 Brassica napus HOM05D006862 ORTHO05D008726 3.3e-74 282.3 228 61.0
CAN.G1432.28 Capsicum annuum HOM05D006862 ORTHO05D008726 5.7e-74 281.6 226 62.8
CDE10G0559 Ceratophyllum demersum HOM05D006862 ORTHO05D008726 9.7e-74 280.8 212 63.2
Lsat_1_v5_gn_7_11121 Lactuca sativa HOM05D001703 ORTHO05D005708 2.2e-70 269.6 221 61.1
unitig_22.g6705 Utricularia gibba HOM05D006862 ORTHO05D008726 4.2e-69 265.4 263 52.9
AUR62018925 Chenopodium quinoa HOM05D006862 ORTHO05D008726 1.4e-67 260.4 223 58.3
Haze_22271 Corylus avellana HOM05D006862 ORTHO05D008726 5.3e-64 248.4 151 79.5
RcHm_v2.0_Chr7g0243981 Rosa chinensis HOM05D006862 ORTHO05D008726 3.5e-63 245.7 193 67.9
Hma1.2p1_0341F.1_g130390 Hydrangea macrophylla HOM05D006862 ORTHO05D008726 6.1e-60 235.0 158 75.3
ATR0782G115 Amborella trichopoda HOM05D006862 ORTHO05D008726 6.3e-57 224.9 225 51.6
Ciclev10006681m.g Citrus clementina HOM05D006862 ORTHO05D008726 9.8e-50 201.1 236 50.8
Pp3c15_18480 Physcomitrium patens HOM05D006862 ORTHO05D008726 5.4e-48 195.3 208 45.7
Psat1g146360 Pisum sativum HOM05D006862 ORTHO05D008726 1.2e-47 194.1 146 65.8
AagrBONN_evm.TU.Sc2ySwM_344.2907 Anthoceros agrestis HOM05D006862 ORTHO05D008726 2.9e-46 189.5 221 45.7
HanXRQChr04g0123461 Helianthus annuus HOM05D006862 ORTHO05D008726 1.5e-42 177.2 158 58.2
Solyc10g018870.2 Solanum lycopersicum HOM05D006862 ORTHO05D008726 4.4e-42 175.6 139 59.7
Mapoly0069s0077 Marchantia polymorpha HOM05D006862 ORTHO05D008726 1.7e-38 163.7 221 39.4
CBR_g23028 Chara braunii HOM05D006862 ORTHO05D008726 2.9e-38 162.9 217 38.7
CBR_g8943 Chara braunii HOM05D006862 ORTHO05D008726 2.8e-36 156.4 216 38.4
Psat7g091920 Pisum sativum HOM05D006862 ORTHO05D008726 3.6e-36 156.0 118 66.1
MCO09G856 Micromonas commoda HOM05D006862 ORTHO05D008726 1.5e-34 150.6 216 37.0
FAN08G1952 Fragaria x ananassa HOM05D006862 ORTHO05D008726 2.0e-31 140.2 91 75.8
Lsat_1_v5_gn_4_149521 Lactuca sativa HOM05D006862 ORTHO05D008726 5.6e-29 132.1 109 61.5
Peaxi162Scf00001g05620 Petunia axillaris HOM05D006862 ORTHO05D008726 2.3e-27 126.7 166 42.8
SalBow4G2162 Salvia bowleyana HOM05D006862 ORTHO05D008726 7.3e-21 105.1 72 66.7
PRCOL_00000002 Prasinoderma coloniale HOM05D006862 ORTHO05D008726 2.1e-20 103.6 208 33.7
Lsat_1_v5_gn_2_48340 Lactuca sativa HOM05D006862 ORTHO05D008726 6.2e-12 75.5 88 50.0
Lsat_1_v5_gn_6_41620 Lactuca sativa HOM05D006862 ORTHO05D008726 6.2e-12 75.5 88 50.0
MD15G1370600 Malus domestica HOM05D006862 ORTHO05D008726 2.2e-09 67.0 43 69.8
Rhsim07G0033200 Rhododendron simsii HOM05D006089 ORTHO05D007345 2.3e-06 57.0 43 62.8


User provided reference genes

Program Settings