Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G2831 Cannabis sativa HOM05D007427 ORTHO05D006413 2.7e-26 122.1 59 100.0
CSS0029156 Camellia sinensis var. sinensis HOM05D007427 ORTHO05D006413 2.7e-10 68.9 56 58.9
Thecc.01G231600 Theobroma cacao HOM05D007427 ORTHO05D006413 4.7e-10 68.2 54 61.1
CSS0036288 Camellia sinensis var. sinensis HOM05D007427 ORTHO05D006413 6.1e-10 67.8 56 57.1
CiPaw.04G107700 Carya illinoinensis HOM05D007427 ORTHO05D006413 1.0e-09 67.0 60 58.3
Dinv19234 Davidia involucrata HOM05D007427 ORTHO05D006413 1.8e-09 66.2 55 60.0
Glyma.03G170900 Glycine max HOM05D007427 ORTHO05D006413 2.3e-09 65.9 48 62.5
Glyma.03G170800 Glycine max HOM05D007427 ORTHO05D006413 3.0e-09 65.5 53 58.5
Cpa.g.sc8.193 Carica papaya HOM05D007427 ORTHO05D006413 4.0e-09 65.1 55 61.8
Hma1.2p1_1858F.1_g305540 Hydrangea macrophylla HOM05D007427 ORTHO05D006413 5.2e-09 64.7 58 58.6
COL.COLO4_17317 Corchorus olitorius HOM05D007427 ORTHO05D006413 8.8e-09 63.9 55 54.5
Duzib211G0080 Durio zibethinus HOM05D007427 ORTHO05D006413 1.2e-08 63.5 53 60.4
CANSAT01G2272 Cannabis sativa HOM05D007427 ORTHO05D006413 1.5e-08 63.2 56 57.1
Glyma.19G171900 Glycine max HOM05D007427 ORTHO05D006413 2.0e-08 62.8 53 56.6
CiPaw.03G152700 Carya illinoinensis HOM05D007427 ORTHO05D006413 4.4e-08 61.6 48 56.2
Lj1g0018605 Lotus japonicus HOM05D007427 ORTHO05D006413 4.4e-08 61.6 54 59.3
COL.COLO4_28358 Corchorus olitorius HOM05D007427 ORTHO05D006413 5.7e-08 61.2 59 55.9
arahy.Tifrunner.gnm1.ann1.KG3A2Z Arachis hypogaea HOM05D007427 ORTHO05D006413 7.5e-08 60.8 50 60.0
Duzib138G0914 Durio zibethinus HOM05D007427 ORTHO05D006413 9.8e-08 60.5 53 54.7
VMungo1383G3325 Vigna mungo HOM05D007427 ORTHO05D006413 1.3e-07 60.1 50 58.0
MELO3C012793.2 Cucumis melo HOM05D007427 ORTHO05D006413 1.7e-07 59.7 58 53.4
Gohir.A07G154400 Gossypium hirsutum HOM05D007427 ORTHO05D006413 1.7e-07 59.7 54 51.9
Gohir.D07G160800 Gossypium hirsutum HOM05D007427 ORTHO05D006413 1.7e-07 59.7 54 51.9
Gorai.001G183700 Gossypium raimondii HOM05D007427 ORTHO05D006413 1.7e-07 59.7 54 51.9
Phvul.001G168900 Phaseolus vulgaris HOM05D007427 ORTHO05D006413 1.7e-07 59.7 48 60.4
Rhsim13G0042300 Rhododendron simsii HOM05D007427 ORTHO05D006413 2.8e-07 58.9 54 46.3
Sabra02G0191700 Salix brachista HOM05D007427 ORTHO05D006413 2.8e-07 58.9 64 50.0
Actinidia23744 Actinidia chinensis HOM05D007427 ORTHO05D006413 4.8e-07 58.2 53 58.5
Ciclev10022672m.g Citrus clementina HOM05D007427 ORTHO05D006413 4.8e-07 58.2 68 45.6
CsaV3_3G039490 Cucumis sativus L. HOM05D007427 ORTHO05D006413 4.8e-07 58.2 39 69.2
Potri.002G252400 Populus trichocarpa HOM05D007427 ORTHO05D006413 4.8e-07 58.2 64 50.0
PSO063G2436 Papaver somniferum HOM05D007427 ORTHO05D006413 8.3e-07 57.4 54 57.4
Ciclev10022773m.g Citrus clementina HOM05D007427 ORTHO05D006413 1.1e-06 57.0 69 43.5
Prupe.8G208000 Prunus persica HOM05D007427 ORTHO05D006413 1.1e-06 57.0 52 57.7
Cc01_g17390 Coffea canephora HOM05D007427 ORTHO05D006413 1.4e-06 56.6 54 50.0
CiPaw.04G107800 Carya illinoinensis HOM05D007427 ORTHO05D006413 1.8e-06 56.2 50 60.0
FAN15G2923 Fragaria x ananassa HOM05D007427 ORTHO05D006413 1.8e-06 56.2 53 62.3
Lalb_Chr01g0019331 Lupinus albus HOM05D007427 ORTHO05D006413 1.8e-06 56.2 53 56.6
MD05G1181500 Malus domestica HOM05D007427 ORTHO05D006413 1.8e-06 56.2 52 57.7
PSO017G4218 Papaver somniferum HOM05D007427 ORTHO05D006413 1.8e-06 56.2 54 55.6
QL09p044390 Quercus lobata HOM05D007427 ORTHO05D006413 1.8e-06 56.2 53 52.8
FvH4_2g19680 Fragaria vesca HOM05D007427 ORTHO05D006413 2.4e-06 55.8 53 60.4
FAN24G2151 Fragaria x ananassa HOM05D007427 ORTHO05D006413 2.4e-06 55.8 53 60.4
Lj1g0008336 Lotus japonicus HOM05D007427 ORTHO05D006413 3.1e-06 55.5 50 58.0
RcHm_v2.0_Chr6g0285411 Rosa chinensis HOM05D007427 ORTHO05D006413 3.1e-06 55.5 52 57.7
Haze_24760 Corylus avellana HOM05D007427 ORTHO05D006413 4.1e-06 55.1 53 47.2
Nitab4.5_0001740g0060 Nicotiana tabacum HOM05D007427 ORTHO05D006413 4.1e-06 55.1 46 52.2
FAN27G1788 Fragaria x ananassa HOM05D007427 ORTHO05D006413 5.4e-06 54.7 53 60.4
Gohir.A07G154300 Gossypium hirsutum HOM05D007427 ORTHO05D006413 5.4e-06 54.7 67 43.3
Nn3g19877 Nelumbo nucifera HOM05D007427 ORTHO05D006413 5.4e-06 54.7 53 54.7
Thecc.01G231700 Theobroma cacao HOM05D007427 ORTHO05D006413 5.4e-06 54.7 63 46.0
DCAR_012627 Daucus carota HOM05D007427 ORTHO05D006413 7.0e-06 54.3 54 51.9
Gohir.D07G160600 Gossypium hirsutum HOM05D007427 ORTHO05D006413 7.0e-06 54.3 67 43.3
Medtr7g099670 Medicago truncatula HOM05D007427 ORTHO05D006413 7.0e-06 54.3 53 49.1
SGA_v2.0_scaffold42G16152 Striga asiatica HOM05D007427 ORTHO05D006413 7.0e-06 54.3 59 54.2
Lalb_Chr25g0289621 Lupinus albus HOM05D007427 ORTHO05D006413 9.1e-06 53.9 54 57.4


User provided reference genes

Program Settings