Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G2686 Cannabis sativa HOM05D009677 ORTHO05D011883 2.2e-188 662.1 337 100.0
CANSAT21G2267 Cannabis sativa HOM05D009677 ORTHO05D011883 4.1e-150 535.0 344 77.9
CANSAT25G3715 Cannabis sativa HOM05D009677 ORTHO05D011883 3.1e-97 359.4 185 95.7
CANSAT56G1590 Cannabis sativa HOM05D009677 ORTHO05D011883 8.4e-87 324.7 321 52.3
CANSAT21G0466 Cannabis sativa HOM05D009677 ORTHO05D011883 6.3e-50 202.2 268 39.9
CANSAT21G2094 Cannabis sativa HOM05D009677 ORTHO05D011883 7.6e-48 195.3 316 35.1
CANSAT54G1276 Cannabis sativa HOM05D009677 ORTHO05D011883 2.2e-47 193.7 283 43.8
CANSAT56G1383 Cannabis sativa HOM05D009677 ORTHO05D011883 1.1e-43 181.4 221 38.9
CANSAT54G2054 Cannabis sativa HOM05D009677 ORTHO05D011883 4.5e-40 169.5 264 35.6
CANSAT56G1292 Cannabis sativa HOM05D009677 ORTHO05D011883 2.1e-37 160.6 221 39.8
CANSAT56G0916 Cannabis sativa HOM05D009677 ORTHO05D011883 8.8e-36 155.2 193 38.3
CANSAT11G1757 Cannabis sativa HOM05D009677 ORTHO05D011883 5.9e-32 142.5 167 39.5
CANSAT35G1061 Cannabis sativa HOM05D009677 ORTHO05D011883 3.6e-29 133.3 287 29.6
CANSAT56G0893 Cannabis sativa HOM05D009677 ORTHO05D011883 1.5e-27 127.9 175 37.7
HanXRQChr16g0521191 Helianthus annuus HOM05D009677 ORTHO05D003386 4.4e-27 126.3 269 35.7
CANSAT54G0557 Cannabis sativa HOM05D009677 ORTHO05D011883 2.5e-22 110.5 121 43.8
MBI02_g29975_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 6.3e-18 95.9 308 27.3
MBI12_g43234_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 8.2e-18 95.5 321 26.2
MBI19_g18856_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.6e-16 91.3 319 26.6
CANSAT64G2341 Cannabis sativa HOM05D009464 ORTHO05D010402 2.7e-16 90.5 242 32.2
MBI13_g12520_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.5e-16 90.1 330 27.6
MBI07_g22513_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 4.5e-16 89.7 315 25.7
CANSAT56G1875 Cannabis sativa HOM05D009677 ORTHO05D011883 1.0e-15 88.6 195 35.4
CANSAT56G1321 Cannabis sativa HOM05D024511 ORTHO05D003213 1.3e-15 88.2 182 36.3
Lsat_1_v5_gn_9_92641 Lactuca sativa HOM05D000708 ORTHO05D010402 1.7e-15 87.8 277 29.6
Lsat_1_v5_gn_6_44421 Lactuca sativa HOM05D009464 ORTHO05D010402 2.9e-15 87.0 267 29.6
MBI15_g15098_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.9e-15 87.0 307 26.4
CANSAT56G2086 Cannabis sativa HOM05D024511 ORTHO05D003213 5.0e-15 86.3 182 35.7
MBI13_g41510_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 8.5e-15 85.5 268 28.7
MBI16_g34343_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.1e-14 85.1 259 27.0
MBI19_g27593_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.1e-14 85.1 272 26.1
MBI19_g18851_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.2e-14 83.6 251 26.7
MBI19_g01025_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 5.5e-14 82.8 323 24.5
CANSAT11G0544 Cannabis sativa HOM05D009677 ORTHO05D011883 7.2e-14 82.4 115 42.6
CANSAT54G1328 Cannabis sativa HOM05D009677 ORTHO05D011883 4.7e-13 79.7 92 38.0
MBI01_g39588_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 4.7e-13 79.7 206 28.2
CANSAT11G1232 Cannabis sativa HOM05D009677 ORTHO05D011883 6.1e-13 79.3 114 35.1
MBI16_g20833_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 6.1e-13 79.3 223 28.7
CANSAT64G0104 Cannabis sativa HOM05D009677 ORTHO05D011883 1.0e-12 78.6 93 37.6
MBI14_g01819_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.3e-12 77.4 223 28.3
HanXRQChr14g0428391 Helianthus annuus HOM05D009464 ORTHO05D010402 3.0e-12 77.0 289 28.7
MBI07_g41667_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.0e-12 77.0 223 28.3
MBI11_g23002_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.0e-12 77.0 261 25.3
HanXRQChr14g0457061 Helianthus annuus HOM05D009464 ORTHO05D010402 4.0e-12 76.6 320 25.6
MBI11_g33696_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 5.2e-12 76.3 164 31.7
MBI14_g16528_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 6.8e-12 75.9 220 29.1
MBI14_g38741_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 6.8e-12 75.9 172 30.2
MBI17_g17142_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 6.8e-12 75.9 313 24.3
MBI13_g26213_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 8.8e-12 75.5 218 28.4
MBI16_g08490_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 8.8e-12 75.5 321 26.2
MBI17_g07057_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 8.8e-12 75.5 255 23.9
CANSAT56G3353 Cannabis sativa HOM05D024511 ORTHO05D003213 1.2e-11 75.1 182 32.4
ECA247G0144 Erigeron canadensis HOM05D000006 ORTHO05D001423 1.2e-11 75.1 290 29.0
MBI11_g21812_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.2e-11 75.1 164 31.7
MBI11_g22671_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.2e-11 75.1 269 26.0
MBI18_g20995_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.6e-11 73.9 270 24.1
HanXRQChr08g0209501 Helianthus annuus HOM05D009464 ORTHO05D010402 3.4e-11 73.6 265 27.5
MBI19_g30599_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 4.4e-11 73.2 260 28.1
ECA247G2711 Erigeron canadensis HOM05D000107 ORTHO05D000062 5.7e-11 72.8 262 26.7
MBI08_g40514_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 5.7e-11 72.8 208 28.8
HanXRQChr12g0382741 Helianthus annuus HOM05D009464 ORTHO05D010402 7.5e-11 72.4 164 35.4
MBI10_g06414_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 9.8e-11 72.0 235 25.5
MBI14_g25533_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 9.8e-11 72.0 192 29.7
PSO210G0630 Papaver somniferum HOM05D030578 ORTHO05D000669 9.8e-11 72.0 201 25.4
Dinv11320 Davidia involucrata HOM05D000791 ORTHO05D000669 2.8e-10 70.5 222 26.1
MBI14_g18701_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.7e-10 70.1 227 25.1
MBI17_g38326_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.7e-10 70.1 193 29.0
MBI05_g15995_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 6.3e-10 69.3 203 29.6
MBI14_g32811_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 6.3e-10 69.3 157 29.3
MBI18_g39301_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 6.3e-10 69.3 204 25.5
MBI08_g37905_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 8.3e-10 68.9 238 23.9
PGR004G1992 Punica granatum HOM05D000791 ORTHO05D000669 8.3e-10 68.9 320 22.2
CANSAT01G1847 Cannabis sativa HOM05D014621 ORTHO05D015019 1.4e-09 68.2 293 23.2
ECA232G1853 Erigeron canadensis HOM05D008258 ORTHO05D003386 1.4e-09 68.2 286 25.9
MBI19_g46209_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.4e-09 68.2 324 24.1
Migut.F01288 Erythranthe guttata HOM05D000791 ORTHO05D000669 1.8e-09 67.8 237 26.2
Lsat_1_v5_gn_1_94380 Lactuca sativa HOM05D000031 ORTHO05D000669 2.4e-09 67.4 225 25.8
ECA234G1510 Erigeron canadensis HOM05D008258 ORTHO05D003386 3.1e-09 67.0 278 25.5
Migut.N00810 Erythranthe guttata HOM05D000791 ORTHO05D000669 3.1e-09 67.0 236 25.4
MBI18_g01981_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.1e-09 67.0 279 25.1
MBI09_g39165_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 4.1e-09 66.6 310 25.5
ECA236G4325 Erigeron canadensis HOM05D008258 ORTHO05D003386 5.4e-09 66.2 273 24.9
MBI06_g14034_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 5.4e-09 66.2 294 25.9
MBI09_g42525_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 5.4e-09 66.2 205 29.3
MBI12_g16196_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 5.4e-09 66.2 252 25.4
ECA236G1563 Erigeron canadensis HOM05D008258 ORTHO05D003386 7.0e-09 65.9 273 24.9
ECA238G2137 Erigeron canadensis HOM05D008258 ORTHO05D003386 7.0e-09 65.9 278 24.5
MBI14_g20079_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 7.0e-09 65.9 197 26.4
MBI16_g11620_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 7.0e-09 65.9 283 25.8
ECA233G0119 Erigeron canadensis HOM05D008258 ORTHO05D003386 9.1e-09 65.5 286 25.5
ECA233G5224 Erigeron canadensis HOM05D008258 ORTHO05D003386 9.1e-09 65.5 273 24.9
MBI15_g01162_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 9.1e-09 65.5 165 30.3
MBI15_g13723_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 9.1e-09 65.5 282 25.2
CSS0033268 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.2e-08 65.1 308 25.6
ECA240G3807 Erigeron canadensis HOM05D000380 ORTHO05D000561 1.2e-08 65.1 298 25.5
ECA234G4134 Erigeron canadensis HOM05D008258 ORTHO05D003386 2.0e-08 64.3 280 25.0
ECA248G1995 Erigeron canadensis HOM05D008258 ORTHO05D003386 2.0e-08 64.3 291 25.1
CSS0004685 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.7e-08 63.9 308 25.6
CSS0008205 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.7e-08 63.9 308 25.6
ECA233G0756 Erigeron canadensis HOM05D008258 ORTHO05D003386 2.7e-08 63.9 283 24.4
CSS0029753 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.5e-08 63.5 308 25.6
MBI09_g45689_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.5e-08 63.5 130 31.5
MBI07_g06917_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 4.5e-08 63.2 253 22.9
CSS0034332 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 5.9e-08 62.8 308 25.6
COL.COLO4_19832 Corchorus olitorius HOM05D015286 ORTHO05D000669 5.9e-08 62.8 195 24.6
ECA248G1410 Erigeron canadensis HOM05D008258 ORTHO05D003386 5.9e-08 62.8 278 24.5
HanXRQChr10g0290341 Helianthus annuus HOM05D009464 ORTHO05D010402 5.9e-08 62.8 169 29.0
ECA246G4534 Erigeron canadensis HOM05D008258 ORTHO05D003386 7.7e-08 62.4 280 25.0
ECA248G2223 Erigeron canadensis HOM05D008258 ORTHO05D003386 7.7e-08 62.4 278 25.2
HanXRQChr16g0498571 Helianthus annuus HOM05D009464 ORTHO05D010402 1.0e-07 62.0 340 24.1
MBI17_g17634_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.0e-07 62.0 202 27.2
ECA246G2215 Erigeron canadensis HOM05D008258 ORTHO05D003386 2.2e-07 60.8 286 25.2
MBI15_g00064_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.2e-07 60.8 153 30.7
CANSAT80G1283 Cannabis sativa HOM05D013174 ORTHO05D015289 2.9e-07 60.5 306 22.9
ECA248G3179 Erigeron canadensis HOM05D008258 ORTHO05D003386 2.9e-07 60.5 273 24.5
MBI05_g21268_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.9e-07 60.5 194 25.3
MBI10_g43794_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.9e-07 60.5 197 25.9
RcHm_v2.0_Chr5g0070861 Rosa chinensis HOM05D008485 ORTHO05D009647 2.9e-07 60.5 278 26.6
TWI18G1095 Tripterygium wilfordii HOM05D003120 ORTHO05D003568 2.9e-07 60.5 200 26.0
TWI73G1228 Tripterygium wilfordii HOM05D003120 ORTHO05D003568 2.9e-07 60.5 202 24.8
ECA232G1383 Erigeron canadensis HOM05D008258 ORTHO05D003386 3.8e-07 60.1 292 24.7
ECA238G3550 Erigeron canadensis HOM05D008258 ORTHO05D003386 3.8e-07 60.1 280 26.1
ECA247G1919 Erigeron canadensis HOM05D008258 ORTHO05D003386 3.8e-07 60.1 273 23.1
MBI05_g08210_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.8e-07 60.1 190 26.8
MBI09_g32569_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.8e-07 60.1 152 28.3
MBI17_g19036_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.8e-07 60.1 150 29.3
ECA236G4155 Erigeron canadensis HOM05D008258 ORTHO05D003386 5.0e-07 59.7 285 24.2
CSS0047376 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 6.5e-07 59.3 308 25.3
ECA233G3251 Erigeron canadensis HOM05D008258 ORTHO05D003386 6.5e-07 59.3 274 24.1
MBI16_g32806_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 6.5e-07 59.3 215 27.0
MBI16_g34285_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 6.5e-07 59.3 215 26.0
Lsat_1_v5_gn_2_105040 Lactuca sativa HOM05D014621 ORTHO05D015019 8.5e-07 58.9 210 22.4
MBI18_g07911_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 8.5e-07 58.9 213 24.9
CANSAT78G2516 Cannabis sativa HOM05D009677 ORTHO05D011883 1.5e-06 58.2 118 31.4
MBI12_g42096_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.5e-06 58.2 183 23.5
MBI14_g07056_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.5e-06 58.2 222 25.7
RcHm_v2.0_Chr2g0086631 Rosa chinensis HOM05D002291 ORTHO05D000222 1.5e-06 58.2 304 21.7
vmacro12141 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 1.5e-06 58.2 272 23.2
CSS0021747 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.5e-06 57.4 308 25.0
CiPaw.08G047100 Carya illinoinensis HOM05D000791 ORTHO05D000669 2.5e-06 57.4 313 22.4
ECA234G0430 Erigeron canadensis HOM05D000107 ORTHO05D000062 2.5e-06 57.4 291 24.4
ECA234G3574 Erigeron canadensis HOM05D008258 ORTHO05D003386 2.5e-06 57.4 280 24.6
MBI14_g28713_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.5e-06 57.4 126 31.0
MELO3C032003.2 Cucumis melo HOM05D001963 ORTHO05D001863 3.2e-06 57.0 168 28.0
ECA236G1882 Erigeron canadensis HOM05D008258 ORTHO05D003386 3.2e-06 57.0 309 24.3
FAN28G2311 Fragaria x ananassa HOM05D002291 ORTHO05D000222 3.2e-06 57.0 272 22.4
Glyma.05G165700 Glycine max HOM05D008291 ORTHO05D000669 3.2e-06 57.0 313 21.1
Lj5A781T25 Lonicera japonica HOM05D010561 ORTHO05D011256 3.2e-06 57.0 202 23.3
MD09G1027200 Malus domestica HOM05D005763 ORTHO05D005970 3.2e-06 57.0 277 24.5
Peaxi162Scf00634g00413 Petunia axillaris HOM05D003120 ORTHO05D003568 3.2e-06 57.0 320 24.1
DCAR_027889 Daucus carota HOM05D012986 ORTHO05D016269 4.2e-06 56.6 239 21.3
ECA234G0397 Erigeron canadensis HOM05D008258 ORTHO05D003386 4.2e-06 56.6 285 23.9
RcHm_v2.0_Chr5g0029021 Rosa chinensis HOM05D008485 ORTHO05D009647 4.2e-06 56.6 230 27.4
vmacro12139 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 4.2e-06 56.6 260 23.8


User provided reference genes

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