Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G2680 Cannabis sativa HOM05D002619 ORTHO05D002804 2.3e-111 405.6 210 100.0
CANSAT01G1623 Cannabis sativa HOM05D002619 ORTHO05D002804 2.3e-95 352.4 190 96.3
CANSAT54G2555 Cannabis sativa HOM05D002619 ORTHO05D002804 2.7e-27 126.3 239 46.4
RcHm_v2.0_Chr5g0062781 Rosa chinensis HOM05D002619 ORTHO05D002804 3.4e-14 82.8 252 32.1
Thecc.09G328300 Theobroma cacao HOM05D002619 ORTHO05D002804 4.5e-14 82.4 238 37.8
Dinv26273 Davidia involucrata HOM05D002619 ORTHO05D002804 5.9e-14 82.0 204 39.2
CiPaw.14G072600 Carya illinoinensis HOM05D002619 ORTHO05D002804 2.2e-13 80.1 234 36.8
MELO3C020695.2 Cucumis melo HOM05D002619 ORTHO05D002804 2.9e-13 79.7 206 35.4
ClCG03G001850 Citrullus lanatus HOM05D002619 ORTHO05D002804 8.5e-13 78.2 213 37.6
CsaV3_1G033710 Cucumis sativus L. HOM05D002619 ORTHO05D002804 1.4e-12 77.4 206 35.4
Cfa011444 Carpinus fangiana HOM05D002619 ORTHO05D002804 3.2e-12 76.3 238 34.9
CiPaw.13G099700 Carya illinoinensis HOM05D002619 ORTHO05D002804 3.2e-12 76.3 236 37.3
PGSC0003DMG400015561 Solanum tuberosum HOM05D002619 ORTHO05D002804 5.5e-12 75.5 220 35.0
Actinidia37246 Actinidia chinensis HOM05D002619 ORTHO05D002804 7.2e-12 75.1 227 35.7
FAN25G3511 Fragaria x ananassa HOM05D002619 ORTHO05D002804 7.2e-12 75.1 254 31.5
Gohir.D13G234700 Gossypium hirsutum HOM05D002619 ORTHO05D002804 1.6e-11 73.9 215 36.7
Gorai.013G265500 Gossypium raimondii HOM05D002619 ORTHO05D002804 2.1e-11 73.6 215 36.3
Dinv32845 Davidia involucrata HOM05D002619 ORTHO05D002804 2.7e-11 73.2 236 35.2
Gohir.A13G229100 Gossypium hirsutum HOM05D002619 ORTHO05D002804 2.7e-11 73.2 200 38.5
PGSC0003DMG400010881 Solanum tuberosum HOM05D002619 ORTHO05D002804 2.7e-11 73.2 218 35.8
Nitab4.5_0003179g0040 Nicotiana tabacum HOM05D002619 ORTHO05D002804 3.6e-11 72.8 220 33.6
Peaxi162Scf00406g00007 Petunia axillaris HOM05D002619 ORTHO05D002804 4.7e-11 72.4 223 34.1
Prupe.6G085300 Prunus persica HOM05D002619 ORTHO05D002804 4.7e-11 72.4 248 32.3
FAN21G0578 Fragaria x ananassa HOM05D002619 ORTHO05D002804 6.1e-11 72.0 254 31.1
Cc01_g12250 Coffea canephora HOM05D002619 ORTHO05D002804 7.9e-11 71.6 206 38.3
Solyc11g073180.2 Solanum lycopersicum HOM05D002619 ORTHO05D002804 7.9e-11 71.6 191 36.1
FvH4_3g34910 Fragaria vesca HOM05D002619 ORTHO05D002804 1.0e-10 71.2 254 30.3
FAN16G1521 Fragaria x ananassa HOM05D002619 ORTHO05D002804 1.0e-10 71.2 254 30.7
Aqoxy4G03023 Aquilegia oxysepala HOM05D002619 ORTHO05D002804 1.4e-10 70.9 228 33.3
CSS0041199 Camellia sinensis var. sinensis HOM05D002619 ORTHO05D002804 1.4e-10 70.9 240 33.8
COL.COLO4_18442 Corchorus olitorius HOM05D002619 ORTHO05D002804 1.8e-10 70.5 245 33.9
FAN11G0006 Fragaria x ananassa HOM05D002619 ORTHO05D002804 3.0e-10 69.7 254 29.9
MSTRG.18597 Avicennia marina HOM05D002619 ORTHO05D002804 3.9e-10 69.3 218 31.7
Sed0021945 Sechium edule HOM05D002619 ORTHO05D002804 3.9e-10 69.3 209 37.8
Hund05001 Selenicereus undatus HOM05D002619 ORTHO05D002804 3.9e-10 69.3 197 36.0
Oeu062318.1 Olea europaea HOM05D002619 ORTHO05D002804 5.1e-10 68.9 232 34.1
Nitab4.5_0003179g0060 Nicotiana tabacum HOM05D002619 ORTHO05D002804 6.7e-10 68.6 203 36.0
Potri.009G027100 Populus trichocarpa HOM05D002619 ORTHO05D002804 6.7e-10 68.6 238 33.2
Sopen11g030810 Solanum pennellii HOM05D002619 ORTHO05D002804 6.7e-10 68.6 191 35.1
CAN.G820.11 Capsicum annuum HOM05D002619 ORTHO05D002804 8.8e-10 68.2 226 34.1
GSVIVG01025039001 Vitis vinifera HOM05D002619 ORTHO05D002804 2.0e-09 67.0 213 34.3
TAR623G0548 Trochodendron aralioides HOM05D002619 ORTHO05D002804 2.6e-09 66.6 250 32.4
Gohir.D03G130000 Gossypium hirsutum HOM05D002619 ORTHO05D002804 4.4e-09 65.9 225 35.1
Potri.001G235200 Populus trichocarpa HOM05D002619 ORTHO05D002804 4.4e-09 65.9 235 34.9
Actinidia03780 Actinidia chinensis HOM05D002619 ORTHO05D002804 7.4e-09 65.1 213 35.7
arahy.Tifrunner.gnm1.ann1.S371Q2 Arachis hypogaea HOM05D002619 ORTHO05D002804 9.7e-09 64.7 208 31.7
HanXRQChr11g0340291 Helianthus annuus HOM05D002619 ORTHO05D002804 9.7e-09 64.7 239 32.2
Glyma.15G041400 Glycine max HOM05D002619 ORTHO05D002804 1.3e-08 64.3 213 35.2
PGR102G0064 Punica granatum HOM05D002619 ORTHO05D002804 1.7e-08 63.9 224 33.5
Gorai.003G136700 Gossypium raimondii HOM05D002619 ORTHO05D002804 2.2e-08 63.5 225 34.7
Nitab4.5_0000610g0280 Nicotiana tabacum HOM05D002619 ORTHO05D002804 2.2e-08 63.5 208 32.2
CAN.G241.40 Capsicum annuum HOM05D002619 ORTHO05D002804 2.8e-08 63.2 223 34.1
Prupe.6G248900 Prunus persica HOM05D000001 ORTHO05D009784 2.8e-08 63.2 207 34.8
TAR369G0856 Trochodendron aralioides HOM05D002619 ORTHO05D002804 2.8e-08 63.2 236 30.5
Cpa.g.sc3.155 Carica papaya HOM05D003457 ORTHO05D009249 3.7e-08 62.8 201 31.8
MBI14_g29800_MAGBIO Magnolia biondii HOM05D002619 ORTHO05D002804 4.8e-08 62.4 233 31.8
PGSC0003DMG400015562 Solanum tuberosum HOM05D002619 ORTHO05D002804 4.8e-08 62.4 192 33.3
AUR62001841 Chenopodium quinoa HOM05D002619 ORTHO05D002804 6.3e-08 62.0 239 32.6
Oeu040288.1 Olea europaea HOM05D002619 ORTHO05D002804 6.3e-08 62.0 195 36.9
CDE09G0663 Ceratophyllum demersum HOM05D002619 ORTHO05D002920 8.2e-08 61.6 185 33.0
Haze_24026 Corylus avellana HOM05D002619 ORTHO05D002804 8.2e-08 61.6 194 35.6
Nn2g10492 Nelumbo nucifera HOM05D002619 ORTHO05D002804 8.2e-08 61.6 253 32.8
MD11G1114400 Malus domestica HOM05D002619 ORTHO05D002804 1.1e-07 61.2 257 33.1
CDE02G0555 Ceratophyllum demersum HOM05D002619 ORTHO05D002804 1.4e-07 60.8 187 33.2
Nitab4.5_0000610g0270 Nicotiana tabacum HOM05D002619 ORTHO05D002804 1.4e-07 60.8 210 32.4
Nitab4.5_0003179g0010 Nicotiana tabacum HOM05D002619 ORTHO05D002804 1.8e-07 60.5 208 32.2
TAR633G1544 Trochodendron aralioides HOM05D002619 ORTHO05D002804 1.8e-07 60.5 242 30.2
Hma1.2p1_0035F.1_g022040 Hydrangea macrophylla HOM05D002619 ORTHO05D002804 2.4e-07 60.1 225 34.2
Lalb_Chr24g0394271 Lupinus albus HOM05D002619 ORTHO05D002804 2.4e-07 60.1 218 34.4
Peaxi162Scf00406g00012 Petunia axillaris HOM05D002619 ORTHO05D002804 2.4e-07 60.1 219 31.5
Ca_01347_v3 Cicer arietinum L. HOM05D002619 ORTHO05D002804 3.1e-07 59.7 190 33.2
Ca_27691_v3 Cicer arietinum L. HOM05D002619 ORTHO05D002804 3.1e-07 59.7 190 33.2
Nitab4.5_0000610g0250 Nicotiana tabacum HOM05D002619 ORTHO05D002804 3.1e-07 59.7 195 33.3
Sabra16G0141400 Salix brachista HOM05D002619 ORTHO05D002804 3.1e-07 59.7 233 32.6
Sed0024909 Sechium edule HOM05D002619 ORTHO05D002804 3.1e-07 59.7 226 33.6
FAN02G3020 Fragaria x ananassa HOM05D002619 ORTHO05D002804 4.1e-07 59.3 203 31.5
Eucgr.B02404 Eucalyptus grandis HOM05D002619 ORTHO05D002804 5.3e-07 58.9 236 34.3
MBI05_g38495_MAGBIO Magnolia biondii HOM05D002619 ORTHO05D002804 5.3e-07 58.9 226 31.4
Ah.08g214850 Amaranthus hybridus HOM05D002619 ORTHO05D002804 7.0e-07 58.5 216 32.4
MELO3C013675.2 Cucumis melo HOM05D002619 ORTHO05D002804 7.0e-07 58.5 239 31.4
FAN27G0692 Fragaria x ananassa HOM05D002619 ORTHO05D002804 7.0e-07 58.5 230 29.6
Rhsim13G0087400 Rhododendron simsii HOM05D002619 ORTHO05D002804 7.0e-07 58.5 198 34.8
THA.LOC104815768 Tarenaya hassleriana HOM05D002619 ORTHO05D002804 7.0e-07 58.5 217 30.4
Cpa.g.sc252.23 Carica papaya HOM05D002619 ORTHO05D002804 9.1e-07 58.2 231 34.6
Nitab4.5_0011620g0010 Nicotiana tabacum HOM05D002619 ORTHO05D002804 9.1e-07 58.2 223 31.8
Oeu041011.1 Olea europaea HOM05D002619 ORTHO05D002804 9.1e-07 58.2 193 34.7
vmacro03117 Vaccinium macrocarpon HOM05D002619 ORTHO05D002804 9.1e-07 58.2 193 31.6
Migut.D02134 Erythranthe guttata HOM05D002619 ORTHO05D002804 1.2e-06 57.8 187 31.6
Glyma.13G332900 Glycine max HOM05D002619 ORTHO05D002804 1.2e-06 57.8 227 34.4
Manes.11G134700 Manihot esculenta HOM05D002619 ORTHO05D002804 1.5e-06 57.4 225 33.3
arahy.Tifrunner.gnm1.ann1.6E5JYA Arachis hypogaea HOM05D002619 ORTHO05D002804 2.6e-06 56.6 208 30.8
Nitab4.5_0000070g0090 Nicotiana tabacum HOM05D002619 ORTHO05D002804 2.6e-06 56.6 221 30.8
QL07p046673 Quercus lobata HOM05D002619 ORTHO05D002804 2.6e-06 56.6 227 27.8
ClCG02G020460 Citrullus lanatus HOM05D002619 ORTHO05D002804 3.5e-06 56.2 238 31.5
CsaV3_6G022160 Cucumis sativus L. HOM05D002619 ORTHO05D002804 3.5e-06 56.2 238 31.9
MD03G1100400 Malus domestica HOM05D002619 ORTHO05D002804 3.5e-06 56.2 258 32.2
SalBow2G0511 Salvia bowleyana HOM05D002619 ORTHO05D002804 3.5e-06 56.2 197 34.0
TPR.G34317 Trifolium pratense HOM05D002619 ORTHO05D002804 3.5e-06 56.2 208 32.7
Sabra08G0006000 Salix brachista HOM05D002619 ORTHO05D002804 5.9e-06 55.5 235 30.6
Duzib150G0531 Durio zibethinus HOM05D002619 ORTHO05D002804 7.7e-06 55.1 196 33.2


User provided reference genes

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