Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G2494 Cannabis sativa HOM05D005009 ORTHO05D006203 1.4e-107 392.9 193 100.0
Lalb_Chr19g0132931 Lupinus albus HOM05D005009 ORTHO05D006203 5.4e-99 364.4 189 92.6
Manes.11G007500 Manihot esculenta HOM05D005009 ORTHO05D006203 7.1e-99 364.0 189 92.6
Prupe.2G043300 Prunus persica HOM05D005009 ORTHO05D006203 7.9e-98 360.5 189 92.1
FvH4_7g03830 Fragaria vesca HOM05D005009 ORTHO05D006203 1.0e-97 360.1 190 92.1
FAN03G3221 Fragaria x ananassa HOM05D005009 ORTHO05D006203 1.0e-97 360.1 190 92.1
FAN06G1190 Fragaria x ananassa HOM05D005009 ORTHO05D006203 1.0e-97 360.1 190 92.1
Medtr8g040630 Medicago truncatula HOM05D005009 ORTHO05D006203 3.0e-97 358.6 189 91.5
RcHm_v2.0_Chr1g0327201 Rosa chinensis HOM05D005009 ORTHO05D006203 3.0e-97 358.6 190 91.6
Ciclev10002585m.g Citrus clementina HOM05D005009 ORTHO05D006203 3.9e-97 358.2 189 90.5
Atru.chr12.1310 Acer truncatum HOM05D005009 ORTHO05D006203 5.1e-97 357.8 189 91.5
CSS0011052 Camellia sinensis var. sinensis HOM05D005009 ORTHO05D006203 5.1e-97 357.8 189 92.1
Haze_02993 Corylus avellana HOM05D005009 ORTHO05D006203 5.1e-97 357.8 189 91.5
Phvul.011G192750 Phaseolus vulgaris HOM05D005009 ORTHO05D006203 5.1e-97 357.8 189 91.5
TWI15G1146 Tripterygium wilfordii HOM05D005009 ORTHO05D006203 5.1e-97 357.8 189 89.9
EL10Ac2g02762 Beta vulgaris HOM05D005009 ORTHO05D006203 6.7e-97 357.5 190 90.5
FAN10G3328 Fragaria x ananassa HOM05D005009 ORTHO05D006203 6.7e-97 357.5 189 92.1
Potri.003G193900 Populus trichocarpa HOM05D005009 ORTHO05D006203 8.7e-97 357.1 190 91.1
QL04p021447 Quercus lobata HOM05D005009 ORTHO05D006203 1.1e-96 356.7 189 91.0
QL07p029267 Quercus lobata HOM05D005009 ORTHO05D006203 1.1e-96 356.7 189 91.0
Thecc.03G114300 Theobroma cacao HOM05D005009 ORTHO05D006203 1.1e-96 356.7 189 89.4
Lj3g0027433 Lotus japonicus HOM05D005009 ORTHO05D006203 1.9e-96 355.9 189 90.5
AUR62032626 Chenopodium quinoa HOM05D005009 ORTHO05D006203 3.3e-96 355.1 188 91.0
Ca_24007_v3 Cicer arietinum L. HOM05D005009 ORTHO05D006203 3.3e-96 355.1 192 89.6
PGR031G2406 Punica granatum HOM05D005009 ORTHO05D006203 3.3e-96 355.1 189 89.9
CiPaw.14G009400 Carya illinoinensis HOM05D005009 ORTHO05D006203 4.3e-96 354.8 189 91.0
AUR62031741 Chenopodium quinoa HOM05D005009 ORTHO05D006203 4.3e-96 354.8 188 91.0
Psat4g146480 Pisum sativum HOM05D005009 ORTHO05D006203 4.3e-96 354.8 189 90.5
THA.LOC104826749 Tarenaya hassleriana HOM05D005009 ORTHO05D006203 5.6e-96 354.4 189 88.9
Glyma.09G090300 Glycine max HOM05D005009 ORTHO05D006203 7.4e-96 354.0 189 91.0
COL.COLO4_32171 Corchorus olitorius HOM05D000011 ORTHO05D006203 9.6e-96 353.6 188 88.8
Duzib084G0080 Durio zibethinus HOM05D005009 ORTHO05D006203 9.6e-96 353.6 189 89.4
Gohir.A03G073900 Gossypium hirsutum HOM05D005009 ORTHO05D006203 9.6e-96 353.6 189 88.9
Gohir.D03G100300 Gossypium hirsutum HOM05D005009 ORTHO05D006203 9.6e-96 353.6 189 88.9
Gorai.003G105400 Gossypium raimondii HOM05D005009 ORTHO05D006203 9.6e-96 353.6 189 88.9
TPR.G8532 Trifolium pratense HOM05D005009 ORTHO05D006203 9.6e-96 353.6 189 89.9
Dinv32009 Davidia involucrata HOM05D005009 ORTHO05D006203 1.6e-95 352.8 189 91.0
Duzib068G0995 Durio zibethinus HOM05D005009 ORTHO05D006203 1.6e-95 352.8 189 89.4
CDE08G1579 Ceratophyllum demersum HOM05D005009 ORTHO05D006203 2.1e-95 352.4 189 89.4
Eucgr.E03953 Eucalyptus grandis HOM05D005009 ORTHO05D006203 2.8e-95 352.1 189 89.4
DCAR_006603 Daucus carota HOM05D005009 ORTHO05D006203 3.7e-95 351.7 189 89.9
Actinidia06220 Actinidia chinensis HOM05D005009 ORTHO05D006203 6.2e-95 350.9 189 89.4
ClCG05G027020 Citrullus lanatus HOM05D005009 ORTHO05D006203 6.2e-95 350.9 189 89.4
Sabra03G0144600 Salix brachista HOM05D005009 ORTHO05D006203 3.1e-94 348.6 201 86.1
Solyc01g096610.4 Solanum lycopersicum HOM05D005009 ORTHO05D006203 5.3e-94 347.8 189 87.8
Sopen01g040340 Solanum pennellii HOM05D005009 ORTHO05D006203 5.3e-94 347.8 189 87.8
PGSC0003DMG401003286 Solanum tuberosum HOM05D005009 ORTHO05D006203 5.3e-94 347.8 189 87.8
Eucgr.G03210 Eucalyptus grandis HOM05D005009 ORTHO05D006203 9.0e-94 347.1 189 88.9
CsaV3_5G036940 Cucumis sativus L. HOM05D005009 ORTHO05D006203 1.2e-93 346.7 189 88.4
Aqoxy2G00437 Aquilegia oxysepala HOM05D005009 ORTHO05D006203 1.5e-93 346.3 189 88.4
ECA248G2538 Erigeron canadensis HOM05D005009 ORTHO05D006203 1.5e-93 346.3 190 86.8
Hund13390 Selenicereus undatus HOM05D005009 ORTHO05D006203 1.5e-93 346.3 188 88.8
TAR633G2352 Trochodendron aralioides HOM05D005009 ORTHO05D006203 1.5e-93 346.3 189 88.9
GSVIVG01036607001 Vitis vinifera HOM05D005009 ORTHO05D006203 1.5e-93 346.3 189 89.4
ATR0307G112 Amborella trichopoda HOM05D005009 ORTHO05D006203 2.0e-93 345.9 189 87.8
Zm00001eb317990 Zea mays HOM05D005009 ORTHO05D006203 2.0e-93 345.9 189 87.3
Cc03_g14060 Coffea canephora HOM05D005009 ORTHO05D006203 2.6e-93 345.5 189 89.4
Thhalv10021577m.g Eutrema salsugineum HOM05D005009 ORTHO05D006203 2.6e-93 345.5 190 85.8
AL3G23960 Arabidopsis lyrata HOM05D005009 ORTHO05D006203 3.4e-93 345.1 189 86.2
Carub.0003s1167 Capsella rubella HOM05D005009 ORTHO05D006203 3.4e-93 345.1 189 86.8
MBI19_g44926_MAGBIO Magnolia biondii HOM05D005009 ORTHO05D006203 4.5e-93 344.7 188 88.8
Nitab4.5_0002838g0060 Nicotiana tabacum HOM05D005009 ORTHO05D006203 4.5e-93 344.7 188 87.8
Dinv11234 Davidia involucrata HOM05D005009 ORTHO05D006203 5.8e-93 344.4 189 88.4
Lsat_1_v5_gn_1_117041 Lactuca sativa HOM05D005009 ORTHO05D006203 7.6e-93 344.0 190 86.3
AT3G12300 Arabidopsis thaliana HOM05D005009 ORTHO05D006203 1.3e-92 343.2 189 85.7
Sp3g10520 Schrenkiella parvula HOM05D005009 ORTHO05D006203 1.3e-92 343.2 189 85.7
Hma1.2p1_0837F.1_g226250 Hydrangea macrophylla HOM05D005009 ORTHO05D006203 2.2e-92 342.4 201 84.1
SEGI_18977 Sequoiadendron giganteum HOM05D005009 ORTHO05D006203 2.9e-92 342.0 188 86.7
BcaB04g18685 Brassica carinata HOM05D005009 ORTHO05D006203 3.8e-92 341.7 189 85.2
A03p37590 Brassica napus HOM05D005009 ORTHO05D006203 3.8e-92 341.7 188 85.6
Nn7g36825 Nelumbo nucifera HOM05D005009 ORTHO05D006203 3.8e-92 341.7 189 87.3
BcaC01g04053 Brassica carinata HOM05D005009 ORTHO05D006203 4.9e-92 341.3 189 84.7
BolC3t16835H Brassica oleracea HOM05D005009 ORTHO05D006203 4.9e-92 341.3 188 85.6
Migut.B01192 Erythranthe guttata HOM05D005009 ORTHO05D006203 4.9e-92 341.3 189 86.2
MBI19_g37444_MAGBIO Magnolia biondii HOM05D005009 ORTHO05D006203 4.9e-92 341.3 195 86.7
PSO384G0249 Papaver somniferum HOM05D005009 ORTHO05D006203 4.9e-92 341.3 189 88.4
C03p45580 Brassica napus HOM05D005009 ORTHO05D006203 6.4e-92 340.9 188 85.1
arahy.Tifrunner.gnm1.ann1.CDA2TW Arachis hypogaea HOM05D005009 ORTHO05D006203 1.1e-91 340.1 210 81.0
PSO339G0131 Papaver somniferum HOM05D005009 ORTHO05D006203 1.1e-91 340.1 189 87.8
MELO3C034019.2 Cucumis melo HOM05D005009 ORTHO05D006203 1.4e-91 339.7 196 85.2
MSTRG.20500 Avicennia marina HOM05D005009 ORTHO05D006203 2.5e-91 339.0 189 86.2
C01p53010 Brassica napus HOM05D005009 ORTHO05D006203 2.5e-91 339.0 188 84.6
BcaC09g48230 Brassica carinata HOM05D005009 ORTHO05D006203 4.2e-91 338.2 189 84.1
SGA_v2.0_scaffold408G51079 Striga asiatica HOM05D005009 ORTHO05D006203 7.1e-91 337.4 189 85.7
Rhsim07G0069300 Rhododendron simsii HOM05D005009 ORTHO05D006203 9.3e-91 337.0 216 77.8
A06p13990 Brassica napus HOM05D005009 ORTHO05D006203 1.6e-90 336.3 188 84.6
Sed0026819 Sechium edule HOM05D005009 ORTHO05D006203 1.6e-90 336.3 214 79.0
BolC1t05245H Brassica oleracea HOM05D005009 ORTHO05D006203 2.1e-90 335.9 188 84.0
HanXRQChr11g0341231 Helianthus annuus HOM05D005009 ORTHO05D006203 2.1e-90 335.9 190 84.2
Ah.01g018000 Amaranthus hybridus HOM05D005009 ORTHO05D006203 3.5e-90 335.1 183 88.5
GSVIVG01028667001 Vitis vinifera HOM05D005009 ORTHO05D006203 7.9e-90 334.0 188 87.2
Mapoly0109s0062 Marchantia polymorpha HOM05D005009 ORTHO05D006203 8.7e-89 330.5 189 81.0
arahy.Tifrunner.gnm1.ann1.SBUN5C Arachis hypogaea HOM05D005009 ORTHO05D006203 3.3e-88 328.6 230 73.5
unitig_22.g5330 Utricularia gibba HOM05D005009 ORTHO05D006203 3.7e-87 325.1 193 82.9
Cre07.g351650 Chlamydomonas reinhardtii HOM05D005009 ORTHO05D006203 6.2e-87 324.3 189 78.3
SMO137G0355 Selaginella moellendorffii HOM05D005009 ORTHO05D006203 1.8e-86 322.8 189 79.4
AagrBONN_evm.TU.Sc2ySwM_340.215 Anthoceros agrestis HOM05D005009 ORTHO05D006203 3.1e-86 322.0 189 79.4
Pp3c16_8300 Physcomitrium patens HOM05D005009 ORTHO05D006203 3.1e-86 322.0 189 77.8
PRCOL_00001494 Prasinoderma coloniale HOM05D005009 ORTHO05D006203 1.5e-85 319.7 189 77.2
Peaxi162Scf00220g00315 Petunia axillaris HOM05D005009 ORTHO05D006203 1.3e-84 316.6 171 87.7
vmacro21942 Vaccinium macrocarpon HOM05D005009 ORTHO05D006203 2.9e-84 315.5 181 85.1
vmacro23458 Vaccinium macrocarpon HOM05D005009 ORTHO05D006203 2.9e-84 315.5 181 85.1
Aa31LG3G6530 Aethionema arabicum HOM05D005009 ORTHO05D006203 1.9e-83 312.8 171 84.8
Os09g0510200 Oryza sativa ssp. japonica HOM05D005009 ORTHO05D006203 5.5e-83 311.2 171 84.8
MCO01G737 Micromonas commoda HOM05D005009 ORTHO05D006203 1.6e-82 309.7 189 74.6
Pp3c7_7130 Physcomitrium patens HOM05D005009 ORTHO05D006203 4.6e-82 308.1 188 74.5
SMO137G0211 Selaginella moellendorffii HOM05D005009 ORTHO05D006203 2.3e-81 305.8 188 74.5
VMungo1127G1850 Vigna mungo HOM05D005009 ORTHO05D006203 3.0e-81 305.4 167 88.6
CSS0003702 Camellia sinensis var. sinensis HOM05D005009 ORTHO05D006203 3.9e-81 305.1 160 91.9
Cpa.g.sc82.9 Carica papaya HOM05D005009 ORTHO05D006203 1.9e-80 302.8 160 90.0
SHI34551 Sapria himalayana HOM05D005009 ORTHO05D006203 1.5e-77 293.1 162 86.4
Glyma.13G184700 Glycine max HOM05D005009 ORTHO05D006203 1.4e-75 286.6 161 86.3
Lj9A658G62 Lonicera japonica HOM05D005009 ORTHO05D006203 1.8e-70 269.6 172 78.5
CAN.G134.28 Capsicum annuum HOM05D005009 ORTHO05D006203 6.9e-70 267.7 209 66.0
Sed0013386 Sechium edule HOM05D005009 ORTHO05D006203 6.7e-65 251.1 140 88.6
Haze_26638 Corylus avellana HOM05D005009 ORTHO05D006203 3.7e-63 245.4 188 63.8
Pp3c25_460 Physcomitrium patens HOM05D005009 ORTHO05D006203 8.0e-58 227.6 188 59.6
SMO232G0039 Selaginella moellendorffii HOM05D005009 ORTHO05D006203 4.8e-55 218.4 183 57.9
SMO352G0037 Selaginella moellendorffii HOM05D005009 ORTHO05D006203 9.1e-54 214.2 206 51.0
CDE08G0779 Ceratophyllum demersum HOM05D005009 ORTHO05D006203 1.2e-53 213.8 112 89.3
HPP92_011758 Vanilla planifolia HOM05D005009 ORTHO05D006203 1.2e-53 213.8 149 71.1
Glyma.13G188400 Glycine max HOM05D005009 ORTHO05D006203 3.2e-51 205.7 129 79.8
BraA03t12913Z Brassica rapa HOM05D005009 ORTHO05D006203 6.1e-50 201.4 106 86.8
MD02G1276800 Malus domestica HOM05D005009 ORTHO05D006203 6.1e-50 201.4 109 90.8
Oeu064146.2 Olea europaea HOM05D005009 ORTHO05D006203 1.4e-49 200.3 112 84.8
HPP92_011756 Vanilla planifolia HOM05D005009 ORTHO05D006203 8.8e-49 197.6 109 89.0
ClCG05G014250 Citrullus lanatus HOM05D005009 ORTHO05D006203 1.2e-48 197.2 158 63.3
Nitab4.5_0004168g0130 Nicotiana tabacum HOM05D005009 ORTHO05D006203 2.2e-47 193.0 109 86.2
MD02G1276900 Malus domestica HOM05D005009 ORTHO05D006203 5.4e-38 161.8 80 92.5
Glyma.13G192001 Glycine max HOM05D005009 ORTHO05D006203 1.6e-37 160.2 80 91.2
Cfa001149 Carpinus fangiana HOM05D005009 ORTHO05D006203 7.7e-37 157.9 80 91.2
Actinidia07967 Actinidia chinensis HOM05D005009 ORTHO05D006203 2.3e-36 156.4 80 88.8
Glyma.13G188051 Glycine max HOM05D005009 ORTHO05D006203 1.2e-34 150.6 84 86.9
Sc11g0006340 Simmondsia chinensis HOM05D005009 ORTHO05D006203 1.2e-34 150.6 81 90.1
HPP92_011747 Vanilla planifolia HOM05D005009 ORTHO05D006203 4.7e-34 148.7 81 81.5
Pp3c6_12450 Physcomitrium patens HOM05D005009 ORTHO05D006203 5.7e-32 141.7 156 44.9
Glyma.13G190100 Glycine max HOM05D005009 ORTHO05D006203 7.5e-32 141.4 72 88.9
MD07G1044300 Malus domestica HOM05D005009 ORTHO05D006203 7.0e-30 134.8 69 89.9
CARHR086850 Cardamine hirsuta HOM05D005009 ORTHO05D006203 1.7e-28 130.2 69 84.1
Prupe.3G123900 Prunus persica HOM05D005009 ORTHO05D006203 2.8e-26 122.9 84 77.4
BolC1t05246H Brassica oleracea HOM05D005009 ORTHO05D006203 6.8e-25 118.2 68 79.4
BcaC09g48229 Brassica carinata HOM05D005009 ORTHO05D006203 3.4e-24 115.9 68 77.9
C01p53030 Brassica napus HOM05D005009 ORTHO05D006203 3.4e-24 115.9 68 77.9
Manes.04G156350 Manihot esculenta HOM05D005009 ORTHO05D006203 3.3e-19 99.4 51 86.3
arahy.Tifrunner.gnm1.ann1.WDN55T Arachis hypogaea HOM05D000001 ORTHO05D009381 1.8e-17 93.6 47 87.2
A03p22660 Brassica napus HOM05D005009 ORTHO05D033042 7.3e-11 71.6 38 84.2
A10p02030 Brassica napus HOM05D005009 ORTHO05D006203 7.3e-11 71.6 38 84.2
C03p63540 Brassica napus HOM05D005009 ORTHO05D033042 7.3e-11 71.6 38 84.2
BraA02t08111Z Brassica rapa HOM05D005009 ORTHO05D033042 7.3e-11 71.6 38 84.2
A01p39420 Brassica napus HOM05D005009 ORTHO05D006203 9.5e-11 71.2 37 86.5


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