Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G2481 Cannabis sativa HOM05D007399 ORTHO05D009341 8.9e-81 303.5 150 100.0
CANSAT01G0413 Cannabis sativa HOM05D007399 ORTHO05D009341 4.1e-70 268.1 141 95.7
CANSAT01G1231 Cannabis sativa HOM05D007399 ORTHO05D009341 4.1e-70 268.1 141 95.7
CANSAT01G2134 Cannabis sativa HOM05D007399 ORTHO05D009341 2.5e-67 258.8 141 92.9
Prupe.8G200700 Prunus persica HOM05D007399 ORTHO05D009341 1.5e-27 126.7 143 49.7
GSVIVG01003279001 Vitis vinifera HOM05D007399 ORTHO05D009341 7.4e-27 124.4 139 50.4
QL09p052198 Quercus lobata HOM05D007399 ORTHO05D009341 1.1e-25 120.6 142 47.9
TAR362G0473 Trochodendron aralioides HOM05D007399 ORTHO05D009341 1.4e-25 120.2 146 47.9
VMungo0331G1622 Vigna mungo HOM05D007399 ORTHO05D009341 1.8e-25 119.8 160 46.2
Phvul.010G020400 Phaseolus vulgaris HOM05D007399 ORTHO05D009341 3.1e-25 119.0 147 46.9
QL09p053062 Quercus lobata HOM05D007399 ORTHO05D009341 4.0e-25 118.6 146 45.2
Peaxi162Scf00398g00810 Petunia axillaris HOM05D007399 ORTHO05D009341 9.0e-25 117.5 102 52.9
AL3G18400 Arabidopsis lyrata HOM05D007399 ORTHO05D009341 1.5e-24 116.7 144 43.8
Atru.chr6.1505 Acer truncatum HOM05D007399 ORTHO05D009341 2.6e-24 115.9 95 57.9
CARHR081750 Cardamine hirsuta HOM05D007399 ORTHO05D009341 2.6e-24 115.9 112 51.8
Haze_24850 Corylus avellana HOM05D007399 ORTHO05D009341 2.6e-24 115.9 135 47.4
Dinv19187 Davidia involucrata HOM05D007399 ORTHO05D009341 3.4e-24 115.5 152 44.1
Carub.0003s0667 Capsella rubella HOM05D007399 ORTHO05D009341 7.6e-24 114.4 113 52.2
Nn1g07919 Nelumbo nucifera HOM05D007399 ORTHO05D009341 1.0e-23 114.0 102 56.9
Oeu037382.1 Olea europaea HOM05D007399 ORTHO05D009341 1.3e-23 113.6 116 50.9
Nitab4.5_0000045g0320 Nicotiana tabacum HOM05D007399 ORTHO05D009341 2.2e-23 112.8 108 50.0
TPR.G17137 Trifolium pratense HOM05D007399 ORTHO05D009341 2.2e-23 112.8 108 54.6
Manes.13G046300 Manihot esculenta HOM05D007399 ORTHO05D009341 2.9e-23 112.5 152 44.1
SHI28622 Sapria himalayana HOM05D000002 ORTHO05D000001 2.9e-23 112.5 116 50.0
Hund05568 Selenicereus undatus HOM05D007399 ORTHO05D009341 2.9e-23 112.5 123 47.2
Sopen09g023130 Solanum pennellii HOM05D007399 ORTHO05D009341 4.9e-23 111.7 155 41.9
AT3G07150 Arabidopsis thaliana HOM05D007399 ORTHO05D009341 8.4e-23 110.9 151 39.7
Ciclev10022115m.g Citrus clementina HOM05D007399 ORTHO05D009341 8.4e-23 110.9 91 59.3
Glyma.16G101000 Glycine max HOM05D007399 ORTHO05D009341 8.4e-23 110.9 104 51.9
Potri.002G244400 Populus trichocarpa HOM05D007399 ORTHO05D009341 8.4e-23 110.9 140 45.0
PGR083G1511 Punica granatum HOM05D007399 ORTHO05D009341 8.4e-23 110.9 128 46.9
Solyc09g059950.3 Solanum lycopersicum HOM05D007399 ORTHO05D009341 1.1e-22 110.5 155 41.3
Thecc.01G222700 Theobroma cacao HOM05D007399 ORTHO05D009341 1.1e-22 110.5 136 44.9
TWI18G0746 Tripterygium wilfordii HOM05D007399 ORTHO05D009341 1.1e-22 110.5 105 54.3
Cfa002599 Carpinus fangiana HOM05D007399 ORTHO05D009341 1.4e-22 110.2 127 48.0
Cc01_g16850 Coffea canephora HOM05D007399 ORTHO05D009341 1.4e-22 110.2 103 52.4
Oeu037384.1 Olea europaea HOM05D007399 ORTHO05D009341 1.4e-22 110.2 105 52.4
CiPaw.03G147600 Carya illinoinensis HOM05D007399 ORTHO05D009341 1.9e-22 109.8 135 45.2
Duzib133G1013 Durio zibethinus HOM05D007399 ORTHO05D009341 1.9e-22 109.8 157 42.0
Thhalv10022223m.g Eutrema salsugineum HOM05D007399 ORTHO05D009341 1.9e-22 109.8 134 47.8
Rhsim01G0254900 Rhododendron simsii HOM05D007399 ORTHO05D009341 1.9e-22 109.8 101 53.5
BcaC05g29751 Brassica carinata HOM05D007399 ORTHO05D009341 2.5e-22 109.4 157 41.4
Medtr8g013040 Medicago truncatula HOM05D007399 ORTHO05D009341 3.2e-22 109.0 146 46.6
Ah.08g214480 Amaranthus hybridus HOM05D007399 ORTHO05D009341 4.2e-22 108.6 128 43.8
DCAR_000523 Daucus carota HOM05D007399 ORTHO05D009341 4.2e-22 108.6 96 58.3
Migut.D02494 Erythranthe guttata HOM05D007399 ORTHO05D009341 4.2e-22 108.6 103 51.5
QL09p053453 Quercus lobata HOM05D007399 ORTHO05D009341 4.2e-22 108.6 138 46.4
CSS0020487 Camellia sinensis var. sinensis HOM05D007399 ORTHO05D009341 7.1e-22 107.8 101 54.5
ECA248G2789 Erigeron canadensis HOM05D007399 ORTHO05D009341 7.1e-22 107.8 129 45.7
Gohir.D11G145400 Gossypium hirsutum HOM05D007399 ORTHO05D009341 7.1e-22 107.8 156 40.4
Sabra02G0185900 Salix brachista HOM05D007399 ORTHO05D009341 9.3e-22 107.5 155 42.6
Psat4g199960 Pisum sativum HOM05D007399 ORTHO05D009341 1.2e-21 107.1 143 45.5
Gorai.007G155900 Gossypium raimondii HOM05D007399 ORTHO05D009341 1.6e-21 106.7 156 39.7
COL.COLO4_15647 Corchorus olitorius HOM05D007399 ORTHO05D009341 2.1e-21 106.3 141 44.7
MD05G1173200 Malus domestica HOM05D007399 ORTHO05D009341 2.1e-21 106.3 129 48.8
AUR62001112 Chenopodium quinoa HOM05D007399 ORTHO05D009341 2.7e-21 105.9 125 45.6
Gohir.A11G139200 Gossypium hirsutum HOM05D007399 ORTHO05D009341 2.7e-21 105.9 155 39.4
Lj3g0000647 Lotus japonicus HOM05D007399 ORTHO05D009341 2.7e-21 105.9 146 45.9
Nitab4.5_0000345g0070 Nicotiana tabacum HOM05D007399 ORTHO05D009341 2.7e-21 105.9 105 52.4
EL10Ac7g17870 Beta vulgaris HOM05D007399 ORTHO05D009341 4.6e-21 105.1 91 53.8
HanXRQChr01g0015211 Helianthus annuus HOM05D007399 ORTHO05D009341 6.0e-21 104.8 91 54.9
Lsat_1_v5_gn_5_180581 Lactuca sativa HOM05D007399 ORTHO05D009341 7.9e-21 104.4 105 51.4
arahy.Tifrunner.gnm1.ann1.5JJB2W Arachis hypogaea HOM05D007399 ORTHO05D009341 1.3e-20 103.6 111 50.5
Cpa.g.sc8.134 Carica papaya HOM05D007399 ORTHO05D009341 1.8e-20 103.2 145 42.1
Aa31LG5G17710 Aethionema arabicum HOM05D007399 ORTHO05D009341 2.3e-20 102.8 106 49.1
ClCG09G008880 Citrullus lanatus HOM05D007399 ORTHO05D009341 3.0e-20 102.4 134 43.3
FAN15G3119 Fragaria x ananassa HOM05D007399 ORTHO05D009341 3.0e-20 102.4 126 45.2
C05p60230 Brassica napus HOM05D007399 ORTHO05D009341 5.1e-20 101.7 104 50.0
BraA05t22833Z Brassica rapa HOM05D007399 ORTHO05D009341 6.7e-20 101.3 104 50.0
Eucgr.H00781 Eucalyptus grandis HOM05D007399 ORTHO05D009341 6.7e-20 101.3 108 50.0
Actinidia09475 Actinidia chinensis HOM05D007399 ORTHO05D009341 8.7e-20 100.9 146 41.1
arahy.Tifrunner.gnm1.ann1.YE6SLX Arachis hypogaea HOM05D007399 ORTHO05D009341 1.5e-19 100.1 111 48.6
Lalb_Chr12g0209951 Lupinus albus HOM05D007399 ORTHO05D009341 1.5e-19 100.1 143 42.7
RcHm_v2.0_Chr6g0284361 Rosa chinensis HOM05D007399 ORTHO05D009341 1.5e-19 100.1 105 49.5
BcaC05g29843 Brassica carinata HOM05D007399 ORTHO05D009341 1.9e-19 99.8 104 49.0
BolC5t34673H Brassica oleracea HOM05D007399 ORTHO05D009341 1.9e-19 99.8 104 49.0
THA.LOC104802666 Tarenaya hassleriana HOM05D007399 ORTHO05D009341 2.5e-19 99.4 103 49.5
A05p41060 Brassica napus HOM05D007399 ORTHO05D009341 3.3e-19 99.0 156 37.2
FvH4_2g18740 Fragaria vesca HOM05D007399 ORTHO05D009341 3.3e-19 99.0 126 45.2
FAN24G1833 Fragaria x ananassa HOM05D007399 ORTHO05D009341 3.3e-19 99.0 126 45.2
PGSC0003DMG401023104 Solanum tuberosum HOM05D007399 ORTHO05D009341 4.3e-19 98.6 101 49.5
CAN.G3.2 Capsicum annuum HOM05D007399 ORTHO05D009341 5.7e-19 98.2 135 41.5
Lj2A1128G40 Lonicera japonica HOM05D007399 ORTHO05D009341 9.7e-19 97.4 81 59.3
Sp3g06090 Schrenkiella parvula HOM05D007399 ORTHO05D009341 9.7e-19 97.4 111 48.6
MELO3C021053.2 Cucumis melo HOM05D007399 ORTHO05D009341 1.1e-17 94.0 133 42.9
FAN27G2185 Fragaria x ananassa HOM05D007399 ORTHO05D009341 1.1e-17 94.0 126 42.9
PSO357G0666 Papaver somniferum HOM05D007399 ORTHO05D009341 1.1e-17 94.0 92 48.9
SalBow6G3187 Salvia bowleyana HOM05D007399 ORTHO05D009341 1.4e-17 93.6 92 51.1
SalBow6G3685 Salvia bowleyana HOM05D007399 ORTHO05D009341 1.4e-17 93.6 92 51.1
Sed0009642 Sechium edule HOM05D007399 ORTHO05D009341 1.8e-17 93.2 132 37.9
CsaV3_7G026010 Cucumis sativus L. HOM05D007399 ORTHO05D009341 2.4e-17 92.8 135 43.0
PSO170G3887 Papaver somniferum HOM05D007399 ORTHO05D009341 4.1e-17 92.0 92 48.9
CDE06G2632 Ceratophyllum demersum HOM05D007399 ORTHO05D009341 5.3e-17 91.7 93 52.7
AUR62008936 Chenopodium quinoa HOM05D007399 ORTHO05D009341 1.2e-16 90.5 76 57.9
Sc24g0003500 Simmondsia chinensis HOM05D007399 ORTHO05D009341 1.2e-16 90.5 130 39.2
ATR0609G108 Amborella trichopoda HOM05D007399 ORTHO05D009341 1.8e-12 76.6 90 46.7
SEGI_10803 Sequoiadendron giganteum HOM05D007399 ORTHO05D009341 1.1e-11 73.9 90 41.1
Hund20426 Selenicereus undatus HOM05D007399 ORTHO05D009341 1.5e-11 73.6 76 47.4
Os01g0918400 Oryza sativa ssp. japonica HOM05D007399 ORTHO05D009341 4.8e-10 68.6 65 47.7
HPP92_011779 Vanilla planifolia HOM05D007399 ORTHO05D009341 3.8e-07 58.9 92 32.6
Zm00001eb364650 Zea mays HOM05D007399 ORTHO05D009341 6.5e-07 58.2 65 40.0
Actinidia23717 Actinidia chinensis HOM05D007399 ORTHO05D009341 8.5e-07 57.8 146 32.2


User provided reference genes

Program Settings