Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G2444 Cannabis sativa HOM05D005644 ORTHO05D007092 4.4e-109 397.9 193 100.0
Prupe.7G156300 Prunus persica HOM05D005644 ORTHO05D007092 5.4e-99 364.4 193 90.2
MD02G1145400 Malus domestica HOM05D005644 ORTHO05D007092 4.6e-98 361.3 193 88.1
Sed0008907 Sechium edule HOM05D005644 ORTHO05D007092 6.0e-98 360.9 193 87.6
MELO3C026580.2 Cucumis melo HOM05D005644 ORTHO05D007092 1.0e-97 360.1 193 88.1
Thecc.01G033400 Theobroma cacao HOM05D005644 ORTHO05D007092 1.8e-97 359.4 193 88.6
CsaV3_3G042790 Cucumis sativus L. HOM05D005644 ORTHO05D007092 5.1e-97 357.8 193 87.6
Gohir.A02G166400 Gossypium hirsutum HOM05D005644 ORTHO05D007092 5.1e-97 357.8 193 88.6
Gohir.D03G013600 Gossypium hirsutum HOM05D005644 ORTHO05D007092 1.5e-96 356.3 193 88.1
Gorai.003G013900 Gossypium raimondii HOM05D005644 ORTHO05D007092 1.5e-96 356.3 193 88.1
TWI73G0320 Tripterygium wilfordii HOM05D005644 ORTHO05D007092 1.5e-96 356.3 193 87.6
QL06p046522 Quercus lobata HOM05D005644 ORTHO05D007092 5.6e-96 354.4 192 85.9
Potri.005G121700 Populus trichocarpa HOM05D005644 ORTHO05D007092 1.3e-95 353.2 193 86.5
CiPaw.02G018800 Carya illinoinensis HOM05D005644 ORTHO05D007092 2.1e-95 352.4 193 86.0
Manes.02G095200 Manihot esculenta HOM05D005644 ORTHO05D007092 2.8e-95 352.1 193 87.0
Potri.007G023500 Populus trichocarpa HOM05D005644 ORTHO05D007092 3.7e-95 351.7 193 86.0
Duzib264G1010 Durio zibethinus HOM05D005644 ORTHO05D007092 4.8e-95 351.3 193 86.5
Ciclev10022394m.g Citrus clementina HOM05D005644 ORTHO05D007092 6.2e-95 350.9 193 87.0
Manes.01G136400 Manihot esculenta HOM05D005644 ORTHO05D007092 6.2e-95 350.9 193 86.0
Lalb_Chr09g0333481 Lupinus albus HOM05D005644 ORTHO05D007092 8.1e-95 350.5 193 85.5
Phvul.003G254800 Phaseolus vulgaris HOM05D005644 ORTHO05D007092 1.1e-94 350.1 193 84.5
RcHm_v2.0_Chr2g0101251 Rosa chinensis HOM05D005644 ORTHO05D007092 1.8e-94 349.4 193 87.0
Glyma.16G138200 Glycine max HOM05D005644 ORTHO05D007092 2.4e-94 349.0 193 84.5
Lj2A454T58 Lonicera japonica HOM05D005644 ORTHO05D007092 2.4e-94 349.0 193 87.0
arahy.Tifrunner.gnm1.ann1.59MT2Q Arachis hypogaea HOM05D005644 ORTHO05D007092 3.1e-94 348.6 193 84.5
Medtr8g077200 Medicago truncatula HOM05D005644 ORTHO05D007092 3.1e-94 348.6 193 85.5
Psat4g094240 Pisum sativum HOM05D005644 ORTHO05D007092 3.1e-94 348.6 193 85.5
Eucgr.I02428 Eucalyptus grandis HOM05D005644 ORTHO05D007092 9.0e-94 347.1 193 85.0
FvH4_1g13080 Fragaria vesca HOM05D005644 ORTHO05D007092 9.0e-94 347.1 190 87.4
vmacro17823 Vaccinium macrocarpon HOM05D005644 ORTHO05D007092 9.0e-94 347.1 194 86.1
SalBow5G1882 Salvia bowleyana HOM05D005644 ORTHO05D007092 1.2e-93 346.7 190 86.8
Nn1g04949 Nelumbo nucifera HOM05D005644 ORTHO05D007092 2.0e-93 345.9 193 85.5
Atru.chr7.2312 Acer truncatum HOM05D005644 ORTHO05D007092 2.6e-93 345.5 191 85.3
Ca_22319_v3 Cicer arietinum L. HOM05D005644 ORTHO05D007092 2.6e-93 345.5 193 84.5
TAR101G0001 Trochodendron aralioides HOM05D005644 ORTHO05D007092 3.4e-93 345.1 193 84.5
ClCG10G013900 Citrullus lanatus HOM05D005644 ORTHO05D007092 7.6e-93 344.0 219 76.7
Dinv39995 Davidia involucrata HOM05D005644 ORTHO05D007092 1.0e-92 343.6 190 86.8
arahy.Tifrunner.gnm1.ann1.SR5TCU Arachis hypogaea HOM05D005644 ORTHO05D007092 1.3e-92 343.2 190 84.2
GSVIVG01018941001 Vitis vinifera HOM05D005644 ORTHO05D007092 1.7e-92 342.8 193 85.5
AT2G18290 Arabidopsis thaliana HOM05D005644 ORTHO05D007092 1.4e-91 339.7 193 82.4
Cc07_g09670 Coffea canephora HOM05D005644 ORTHO05D007092 1.4e-91 339.7 190 84.7
AL3G51550 Arabidopsis lyrata HOM05D005644 ORTHO05D007092 1.9e-91 339.3 193 82.4
Oeu050374.1 Olea europaea HOM05D005644 ORTHO05D007092 1.9e-91 339.3 190 84.7
MSTRG.3592 Avicennia marina HOM05D005644 ORTHO05D007092 7.1e-91 337.4 190 83.7
FvH4_5g29620 Fragaria vesca HOM05D005644 ORTHO05D007092 7.1e-91 337.4 190 85.3
PSO675G1163 Papaver somniferum HOM05D005644 ORTHO05D007092 1.6e-90 336.3 193 82.4
PGR031G1764 Punica granatum HOM05D005644 ORTHO05D007092 1.6e-90 336.3 197 81.2
Solyc02g062680.3 Solanum lycopersicum HOM05D005644 ORTHO05D007092 1.6e-90 336.3 190 84.2
Sopen02g013700 Solanum pennellii HOM05D005644 ORTHO05D007092 1.6e-90 336.3 190 84.2
PSO541G0643 Papaver somniferum HOM05D005644 ORTHO05D007092 2.1e-90 335.9 193 82.9
PGSC0003DMG400015483 Solanum tuberosum HOM05D005644 ORTHO05D007092 2.1e-90 335.9 190 84.2
Migut.L00368 Erythranthe guttata HOM05D005644 ORTHO05D007092 2.7e-90 335.5 190 82.6
Migut.L00376 Erythranthe guttata HOM05D005644 ORTHO05D007092 2.7e-90 335.5 190 82.6
Aa31LG8G15730 Aethionema arabicum HOM05D005644 ORTHO05D007092 3.5e-90 335.1 193 81.9
Sp3g31700 Schrenkiella parvula HOM05D005644 ORTHO05D007092 4.6e-90 334.7 193 81.3
Lj4g0022669 Lotus japonicus HOM05D005644 ORTHO05D007092 7.9e-90 334.0 194 81.4
Carub.0003s3246 Capsella rubella HOM05D005644 ORTHO05D007092 1.8e-89 332.8 193 81.3
Glyma.02G055400 Glycine max HOM05D005644 ORTHO05D007092 2.3e-89 332.4 193 81.9
THA.LOC104819776 Tarenaya hassleriana HOM05D005644 ORTHO05D007092 2.3e-89 332.4 193 81.9
CAN.G53.17 Capsicum annuum HOM05D005644 ORTHO05D007092 3.9e-89 331.6 190 82.6
SGA_v2.0_scaffold44G16541 Striga asiatica HOM05D005644 ORTHO05D007092 5.1e-89 331.3 190 82.6
A06p33310 Brassica napus HOM05D005644 ORTHO05D007092 6.7e-89 330.9 193 80.3
C03p59070 Brassica napus HOM05D005644 ORTHO05D007092 6.7e-89 330.9 193 80.3
BolC3t18168H Brassica oleracea HOM05D005644 ORTHO05D007092 6.7e-89 330.9 193 80.3
Thhalv10022866m.g Eutrema salsugineum HOM05D005644 ORTHO05D007092 6.7e-89 330.9 193 80.8
Hund21503 Selenicereus undatus HOM05D005644 ORTHO05D007092 1.1e-88 330.1 193 81.3
HanXRQChr09g0261331 Helianthus annuus HOM05D005644 ORTHO05D007092 1.9e-88 329.3 193 80.8
TPR.G24098 Trifolium pratense HOM05D005644 ORTHO05D007092 1.9e-88 329.3 232 70.7
BcaB08g34803 Brassica carinata HOM05D005644 ORTHO05D007092 2.5e-88 328.9 193 79.8
Oeu002799.2 Olea europaea HOM05D005644 ORTHO05D007092 3.3e-88 328.6 190 82.6
ECA232G0363 Erigeron canadensis HOM05D005644 ORTHO05D007092 4.3e-88 328.2 193 79.8
EL10Ac4g07935 Beta vulgaris HOM05D005644 ORTHO05D007092 5.7e-88 327.8 193 80.3
Lsat_1_v5_gn_4_151201 Lactuca sativa HOM05D005644 ORTHO05D007092 7.4e-88 327.4 182 85.2
PGR083G1765 Punica granatum HOM05D005644 ORTHO05D007092 1.3e-87 326.6 193 79.3
unitig_37.g12363 Utricularia gibba HOM05D005644 ORTHO05D007092 1.6e-87 326.2 190 80.5
Aqoxy6G01133 Aquilegia oxysepala HOM05D005644 ORTHO05D007092 6.2e-87 324.3 193 79.8
THA.LOC104804235 Tarenaya hassleriana HOM05D005644 ORTHO05D007092 1.8e-86 322.8 193 80.3
Sc16g0002690 Simmondsia chinensis HOM05D005644 ORTHO05D007092 2.4e-86 322.4 193 78.8
MBI02_g12270_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 5.3e-86 321.2 213 75.1
AUR62020530 Chenopodium quinoa HOM05D005644 ORTHO05D007092 1.5e-85 319.7 193 79.3
AUR62043224 Chenopodium quinoa HOM05D005644 ORTHO05D007092 1.5e-85 319.7 193 79.3
Os05g0579800 Oryza sativa ssp. japonica HOM05D005644 ORTHO05D007092 1.3e-84 316.6 200 76.5
ATR0594G186 Amborella trichopoda HOM05D005644 ORTHO05D007092 2.9e-84 315.5 193 78.8
Rhsim11G0151400 Rhododendron simsii HOM05D005644 ORTHO05D007092 4.9e-84 314.7 247 66.8
Zm00001eb342630 Zea mays HOM05D005644 ORTHO05D007092 1.4e-83 313.2 177 83.1
AUR62034193 Chenopodium quinoa HOM05D005644 ORTHO05D007092 2.7e-82 308.9 193 77.2
VMungo0251G3244 Vigna mungo HOM05D005644 ORTHO05D007092 1.0e-81 307.0 170 84.7
BraA06t26260Z Brassica rapa HOM05D005644 ORTHO05D007092 6.7e-81 304.3 199 74.9
FAN19G1519 Fragaria x ananassa HOM05D005644 ORTHO05D007092 8.7e-81 303.9 167 86.8
Nitab4.5_0000136g0330 Nicotiana tabacum HOM05D005644 ORTHO05D007092 3.3e-80 302.0 172 84.3
CSS0024834 Camellia sinensis var. sinensis HOM05D005644 ORTHO05D007092 1.3e-79 300.1 164 86.6
Nitab4.5_0005482g0020 Nicotiana tabacum HOM05D005644 ORTHO05D007092 1.6e-79 299.7 174 84.5
Zm00001eb294590 Zea mays HOM05D005644 ORTHO05D007092 1.4e-78 296.6 177 78.5
CDE04G3399 Ceratophyllum demersum HOM05D005644 ORTHO05D007092 5.3e-78 294.7 164 81.1
Peaxi162Scf00008g03525 Petunia axillaris HOM05D005644 ORTHO05D007092 4.5e-77 291.6 190 76.3
Atru.chr3.600 Acer truncatum HOM05D005644 ORTHO05D007092 1.4e-75 286.6 193 71.5
Sabra05G0100200 Salix brachista HOM05D005644 ORTHO05D007092 2.5e-75 285.8 159 86.2
FAN28G2376 Fragaria x ananassa HOM05D005644 ORTHO05D003509 1.8e-73 279.6 157 87.3
FAN23G1669 Fragaria x ananassa HOM05D005644 ORTHO05D007092 3.0e-73 278.9 158 86.7
BolC7t40857H Brassica oleracea HOM05D005644 ORTHO05D007092 3.1e-70 268.9 197 68.5
FAN08G2945 Fragaria x ananassa HOM05D005644 ORTHO05D007092 4.1e-70 268.5 156 83.3
Hma1.2p1_0789F.1_g218290 Hydrangea macrophylla HOM05D005644 ORTHO05D007092 3.9e-65 251.9 134 88.1
Cpa.g.sc6.131 Carica papaya HOM05D005644 ORTHO05D007092 1.1e-64 250.4 139 86.3
MBI08_g40822_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 1.3e-63 246.9 230 60.0
HPP92_023420 Vanilla planifolia HOM05D005644 ORTHO05D007092 7.0e-62 241.1 193 63.7
Mapoly0106s0034 Marchantia polymorpha HOM05D005644 ORTHO05D007092 1.0e-60 237.3 170 65.9
FAN26G0781 Fragaria x ananassa HOM05D000577 ORTHO05D003509 3.8e-60 235.3 133 85.0
BcaC06g36396 Brassica carinata HOM05D005644 ORTHO05D007092 3.6e-58 228.8 164 67.7
Pp3c7_6320 Physcomitrium patens HOM05D005644 ORTHO05D007092 1.1e-56 223.8 170 62.4
AagrBONN_evm.TU.Sc2ySwM_362.2207 Anthoceros agrestis HOM05D005644 ORTHO05D007092 2.0e-56 223.0 173 60.7
FAN18G2110 Fragaria x ananassa HOM05D005644 ORTHO05D007092 5.7e-56 221.5 166 68.1
SMO137G0236 Selaginella moellendorffii HOM05D005644 ORTHO05D007092 7.4e-56 221.1 170 61.2
SGA_v2.0_scaffold2G01321 Striga asiatica HOM05D005644 ORTHO05D007092 2.6e-53 212.6 190 60.0
MCO15G254 Micromonas commoda HOM05D005644 ORTHO05D007092 4.5e-53 211.8 178 56.7
CARHR108880 Cardamine hirsuta HOM05D005644 ORTHO05D007092 1.4e-49 200.3 112 82.1
PRCOL_00001837 Prasinoderma coloniale HOM05D005644 ORTHO05D007092 4.4e-48 195.3 166 56.6
Haze_27504 Corylus avellana HOM05D005644 ORTHO05D007092 1.1e-43 180.6 142 57.7
SEGI_22782 Sequoiadendron giganteum HOM05D005644 ORTHO05D007092 6.1e-42 174.9 110 72.7
CBR_g49399 Chara braunii HOM05D005644 ORTHO05D007092 1.1e-38 164.1 112 64.3
Cre13.g571850 Chlamydomonas reinhardtii HOM05D005644 ORTHO05D007092 7.7e-37 157.9 144 46.5
FAN13G0528 Fragaria x ananassa HOM05D005644 ORTHO05D007092 4.4e-32 142.1 167 49.1
DCAR_025950 Daucus carota HOM05D005644 ORTHO05D007092 2.7e-29 132.9 135 54.1
Hma1.2p1_2451F.1_g322360 Hydrangea macrophylla HOM05D005644 ORTHO05D007092 9.5e-27 124.4 135 52.6
MBI02_g42708_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 2.3e-25 119.8 136 54.4
MBI02_g23461_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 3.7e-23 112.5 223 38.6
C07p04570 Brassica napus HOM05D005644 ORTHO05D007092 4.1e-22 109.0 125 47.2
MBI18_g01974_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 1.7e-20 103.6 68 70.6
MBI18_g16980_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 2.3e-20 103.2 126 50.0
MBI02_g17151_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 6.2e-18 95.1 136 46.3
Hund21501 Selenicereus undatus HOM05D005644 ORTHO05D007092 1.5e-16 90.5 53 81.1
Hma1.2p1_0450F.1_g155660 Hydrangea macrophylla HOM05D005644 ORTHO05D007092 7.5e-16 88.2 57 71.9
COL.COLO4_22055 Corchorus olitorius HOM05D005644 ORTHO05D007092 2.9e-15 86.3 50 84.0
Ah.13g077660 Amaranthus hybridus HOM05D005644 ORTHO05D007092 1.3e-12 77.4 56 64.3
MBI16_g04464_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 1.7e-07 60.5 102 38.2
Thecc.08G151500 Theobroma cacao HOM05D005644 ORTHO05D007092 1.7e-07 60.5 32 78.1


User provided reference genes

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