Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G2373 Cannabis sativa HOM05D006685 ORTHO05D008244 0.0e+00 1379.8 692 100.0
RcHm_v2.0_Chr2g0103811 Rosa chinensis HOM05D006685 ORTHO05D008244 8.6e-179 631.3 685 51.4
FAN28G0684 Fragaria x ananassa HOM05D006685 ORTHO05D008244 5.4e-173 612.1 678 50.6
Cfa004216 Carpinus fangiana HOM05D006685 ORTHO05D008244 2.7e-172 609.8 693 49.6
FvH4_1g14850 Fragaria vesca HOM05D006685 ORTHO05D008244 4.6e-172 609.0 685 50.4
FAN26G3106 Fragaria x ananassa HOM05D006685 ORTHO05D008244 9.5e-170 601.3 715 48.4
MD15G1276100 Malus domestica HOM05D006685 ORTHO05D008244 1.4e-168 597.4 699 49.2
Atru.chr3.446 Acer truncatum HOM05D006685 ORTHO05D008244 2.0e-167 593.6 712 47.5
FAN28G1646 Fragaria x ananassa HOM05D006685 ORTHO05D008244 2.6e-167 593.2 665 50.1
QL06p043714 Quercus lobata HOM05D006685 ORTHO05D008244 5.8e-167 592.0 700 47.4
FAN23G0082 Fragaria x ananassa HOM05D006685 ORTHO05D008244 1.9e-165 587.0 665 49.8
RcHm_v2.0_Chr1g0329901 Rosa chinensis HOM05D006685 ORTHO05D008244 8.6e-163 578.2 691 48.3
Potri.005G133500 Populus trichocarpa HOM05D006685 ORTHO05D008244 4.0e-160 569.3 694 47.0
Prupe.7G141900 Prunus persica HOM05D006685 ORTHO05D008244 2.6e-159 566.6 687 47.9
Duzib187G0300 Durio zibethinus HOM05D006685 ORTHO05D008244 1.6e-156 557.4 684 45.6
Manes.13G130000 Manihot esculenta HOM05D006685 ORTHO05D008244 1.5e-154 550.8 690 46.1
Thecc.01G048300 Theobroma cacao HOM05D006685 ORTHO05D008244 2.5e-154 550.1 682 45.3
TAR376G1120 Trochodendron aralioides HOM05D006685 ORTHO05D008244 4.0e-152 542.7 730 44.0
Actinidia36520 Actinidia chinensis HOM05D006685 ORTHO05D008244 9.9e-151 538.1 702 45.0
CiPaw.02G011900 Carya illinoinensis HOM05D006685 ORTHO05D008244 2.9e-150 536.6 685 45.7
Dinv26751 Davidia involucrata HOM05D006685 ORTHO05D008244 8.4e-150 535.0 681 45.2
CSS0018173 Camellia sinensis var. sinensis HOM05D006685 ORTHO05D008244 1.2e-145 521.2 694 44.1
Gohir.A12G068800 Gossypium hirsutum HOM05D006685 ORTHO05D008244 1.1e-144 518.1 684 44.7
Gorai.008G072600 Gossypium raimondii HOM05D006685 ORTHO05D008244 1.1e-144 518.1 683 44.5
Gohir.D12G090400 Gossypium hirsutum HOM05D006685 ORTHO05D008244 5.2e-144 515.8 680 44.6
Hma1.2p1_0546F.1_g176210 Hydrangea macrophylla HOM05D006685 ORTHO05D008244 3.4e-143 513.1 612 46.9
Phvul.003G248400 Phaseolus vulgaris HOM05D006685 ORTHO05D008244 4.9e-142 509.2 694 42.5
Lj7A20T60 Lonicera japonica HOM05D006685 ORTHO05D008244 3.2e-141 506.5 603 46.6
COL.COLO4_11329 Corchorus olitorius HOM05D006685 ORTHO05D008244 7.1e-141 505.4 669 43.0
Sabra05G0107200 Salix brachista HOM05D006685 ORTHO05D008244 7.1e-141 505.4 686 43.6
Glyma.02G062800 Glycine max HOM05D006685 ORTHO05D008244 1.3e-137 494.6 688 42.9
TPR.G30340 Trifolium pratense HOM05D006685 ORTHO05D008244 3.1e-136 490.0 680 41.8
VMungo0251G1647 Vigna mungo HOM05D006685 ORTHO05D008244 2.0e-135 487.3 685 42.5
Lalb_Chr16g0388451 Lupinus albus HOM05D006685 ORTHO05D008244 7.9e-132 475.3 682 41.2
Psat4g089520 Pisum sativum HOM05D006685 ORTHO05D008244 6.7e-131 472.2 693 39.8
Medtr8g079100 Medicago truncatula HOM05D006685 ORTHO05D008244 7.4e-130 468.8 685 40.0
CARHR159940 Cardamine hirsuta HOM05D006685 ORTHO05D008244 2.0e-127 460.7 681 41.4
Lj4g0023849 Lotus japonicus HOM05D006685 ORTHO05D008244 4.9e-126 456.1 697 39.0
Sed0001332 Sechium edule HOM05D006685 ORTHO05D008244 8.4e-126 455.3 687 40.9
Aqoxy6G00915 Aquilegia oxysepala HOM05D006685 ORTHO05D008244 2.4e-125 453.8 686 40.8
Ciclev10025347m.g Citrus clementina HOM05D006685 ORTHO05D008244 3.5e-124 449.9 537 46.9
Hund16306 Selenicereus undatus HOM05D006685 ORTHO05D008244 1.3e-123 448.0 676 38.0
vmacro05297 Vaccinium macrocarpon HOM05D006685 ORTHO05D008244 4.3e-122 443.0 678 40.4
PSO541G3044 Papaver somniferum HOM05D006685 ORTHO05D008244 7.4e-122 442.2 694 39.3
AT3G50430 Arabidopsis thaliana HOM05D006685 ORTHO05D008244 1.3e-121 441.4 682 40.3
Sc03g0001280 Simmondsia chinensis HOM05D006685 ORTHO05D008244 2.1e-121 440.7 684 39.0
AL5G30586 Arabidopsis lyrata HOM05D006685 ORTHO05D008244 8.1e-121 438.7 689 39.3
DCAR_025691 Daucus carota HOM05D006685 ORTHO05D008244 8.1e-121 438.7 608 40.6
SalBow1G5517 Salvia bowleyana HOM05D006685 ORTHO05D008244 1.7e-118 431.0 677 39.4
ClCG02G012840 Citrullus lanatus HOM05D006685 ORTHO05D008244 3.8e-118 429.9 708 39.0
Thhalv10010194m.g Eutrema salsugineum HOM05D006685 ORTHO05D008244 2.7e-116 423.7 672 40.0
Sp5g11730 Schrenkiella parvula HOM05D006685 ORTHO05D008244 3.5e-116 423.3 685 39.4
Hma1.2p1_0546F.1_g176200 Hydrangea macrophylla HOM05D006685 ORTHO05D008244 2.3e-115 420.6 569 43.2
CsaV3_2G016900 Cucumis sativus L. HOM05D006685 ORTHO05D008244 5.1e-115 419.5 682 40.0
PGR119G2375 Punica granatum HOM05D006685 ORTHO05D008244 4.3e-114 416.4 690 37.4
HanXRQChr12g0378291 Helianthus annuus HOM05D006685 ORTHO05D008244 1.8e-112 411.0 673 39.1
Cc07_g05580 Coffea canephora HOM05D006685 ORTHO05D008244 2.4e-112 410.6 691 36.2
Migut.H00483 Erythranthe guttata HOM05D006685 ORTHO05D008244 3.1e-112 410.2 677 38.0
Sopen02g034940 Solanum pennellii HOM05D006685 ORTHO05D008244 5.3e-112 409.5 685 37.8
Nn5g29383 Nelumbo nucifera HOM05D006685 ORTHO05D008244 6.9e-112 409.1 570 41.9
PGSC0003DMG402010073 Solanum tuberosum HOM05D006685 ORTHO05D008244 7.6e-111 405.6 683 38.1
Eucgr.I01015 Eucalyptus grandis HOM05D006685 ORTHO05D008244 1.0e-110 405.2 582 41.4
Nitab4.5_0001014g0040 Nicotiana tabacum HOM05D006685 ORTHO05D008244 2.9e-110 403.7 685 38.0
Aa31LG4G18660 Aethionema arabicum HOM05D006685 ORTHO05D008244 5.0e-110 402.9 706 36.4
BcaB05g23218 Brassica carinata HOM05D006685 ORTHO05D008244 7.9e-108 395.6 685 38.1
BolC1t02922H Brassica oleracea HOM05D006685 ORTHO05D008244 2.3e-107 394.0 682 37.8
BraA01t02325Z Brassica rapa HOM05D006685 ORTHO05D008244 2.3e-107 394.0 684 37.4
Lj7A17G42 Lonicera japonica HOM05D006685 ORTHO05D008244 2.3e-107 394.0 567 42.0
CAN.G836.36 Capsicum annuum HOM05D006685 ORTHO05D008244 1.6e-105 387.9 669 37.8
C01p29820 Brassica napus HOM05D006685 ORTHO05D008244 8.2e-105 385.6 663 38.0
Solyc02g090260.3 Solanum lycopersicum HOM05D006685 ORTHO05D008244 8.2e-105 385.6 673 36.8
MBI16_g19900_MAGBIO Magnolia biondii HOM05D006685 ORTHO05D008244 1.2e-103 381.7 634 38.3
SGA_v2.0_scaffold204G41611 Striga asiatica HOM05D006685 ORTHO05D008244 2.0e-103 380.9 597 38.7
Nitab4.5_0000108g0340 Nicotiana tabacum HOM05D006685 ORTHO05D008244 3.4e-103 380.2 696 37.1
A01p24130 Brassica napus HOM05D006685 ORTHO05D008244 5.9e-103 379.4 676 37.0
THA.LOC104821263 Tarenaya hassleriana HOM05D006685 ORTHO05D008244 6.5e-102 375.9 609 39.4
Ca_22212_v3 Cicer arietinum L. HOM05D006685 ORTHO05D008244 9.4e-101 372.1 682 35.3
MELO3C020890.2 Cucumis melo HOM05D006685 ORTHO05D008244 3.6e-100 370.2 736 35.3
Peaxi162Scf00993g00018 Petunia axillaris HOM05D006685 ORTHO05D008244 1.3e-97 361.7 587 37.1
Ca_22230_v3 Cicer arietinum L. HOM05D006685 ORTHO05D008244 2.4e-96 357.5 671 34.9
Carub.0005s1677 Capsella rubella HOM05D006685 ORTHO05D008244 9.1e-96 355.5 501 40.9
ECA246G1174 Erigeron canadensis HOM05D006685 ORTHO05D008244 2.6e-95 354.0 681 36.1
Ah.02g123950 Amaranthus hybridus HOM05D005480 ORTHO05D006735 9.7e-90 335.5 562 35.4
Lsat_1_v5_gn_3_92360 Lactuca sativa HOM05D006685 ORTHO05D008244 2.8e-89 334.0 688 35.6
BcaC09g50030 Brassica carinata HOM05D006685 ORTHO05D008244 1.2e-87 328.6 559 37.9
Haze_15195 Corylus avellana HOM05D006685 ORTHO05D008244 1.6e-87 328.2 707 34.7
ATR0733G107 Amborella trichopoda HOM05D006685 ORTHO05D008244 2.5e-85 320.9 711 33.1
Cpa.g.sc76.25 Carica papaya HOM05D006685 ORTHO05D008244 2.6e-82 310.8 411 42.6
AUR62001974 Chenopodium quinoa HOM05D006685 ORTHO05D008244 5.3e-80 303.1 683 32.5
HPP92_017771 Vanilla planifolia HOM05D006685 ORTHO05D008244 1.0e-78 298.9 668 32.6
Zm00001eb209650 Zea mays HOM05D006685 ORTHO05D008244 2.9e-78 297.4 706 32.4
Zm00001eb209640 Zea mays HOM05D006685 ORTHO05D008244 1.9e-77 294.7 706 32.3
PGR044G2727 Punica granatum HOM05D006685 ORTHO05D008244 3.2e-77 293.9 431 39.4
AUR62003829 Chenopodium quinoa HOM05D006685 ORTHO05D008244 7.2e-77 292.7 424 39.2
Oeu003945.1 Olea europaea HOM05D006685 ORTHO05D008244 3.0e-75 287.3 360 44.4
Os07g0120700 Oryza sativa ssp. japonica HOM05D006685 ORTHO05D008244 4.2e-69 266.9 710 31.1
MD06G1092200 Malus domestica HOM05D006685 ORTHO05D008244 1.7e-65 255.0 304 48.7
arahy.Tifrunner.gnm1.ann1.5EE2XW Arachis hypogaea HOM05D006685 ORTHO05D008244 4.5e-63 246.9 432 34.5
unitig_749.g14219 Utricularia gibba HOM05D006685 ORTHO05D008244 8.6e-62 242.7 379 38.5
CSS0022206 Camellia sinensis var. sinensis HOM05D006685 ORTHO05D008244 5.2e-59 233.4 323 42.4
FAN28G0437 Fragaria x ananassa HOM05D006685 ORTHO05D008244 3.1e-43 181.0 191 52.9
CDE07G0460 Ceratophyllum demersum HOM05D006685 ORTHO05D008244 4.6e-39 167.2 378 32.8
GSVIVG01002723001 Vitis vinifera HOM05D006685 ORTHO05D008244 7.8e-31 139.8 138 54.3
GSVIVG01036190001 Vitis vinifera HOM05D006685 ORTHO05D008244 3.5e-23 114.4 148 43.2
ATR0733G174 Amborella trichopoda HOM05D006685 ORTHO05D008244 1.5e-21 109.0 139 46.0
Prupe.5G239300 Prunus persica HOM05D006685 ORTHO05D008244 1.2e-18 99.4 98 55.1
Mapoly0122s0032 Marchantia polymorpha HOM05D006685 ORTHO05D008244 1.3e-17 95.9 416 26.7
FAN05G3710 Fragaria x ananassa HOM05D006685 ORTHO05D008244 7.9e-15 86.7 78 57.7
FAN08G2647 Fragaria x ananassa HOM05D006685 ORTHO05D008244 7.9e-15 86.7 78 57.7
Pp3c3_30590 Physcomitrium patens HOM05D006685 ORTHO05D008244 1.8e-14 85.5 681 22.8
CDE07G1850 Ceratophyllum demersum HOM05D006685 ORTHO05D008244 2.5e-13 81.6 249 29.3
SEGI_02281 Sequoiadendron giganteum HOM05D006685 ORTHO05D008244 7.4e-13 80.1 386 23.3
SEGI_38886 Sequoiadendron giganteum HOM05D006685 ORTHO05D008244 9.6e-13 79.7 188 34.0
MD06G1092300 Malus domestica HOM05D006685 ORTHO05D008244 2.6e-10 71.6 101 43.6
SEGI_35306 Sequoiadendron giganteum HOM05D006685 ORTHO05D008244 1.7e-09 68.9 120 36.7
unitig_78.g29629 Utricularia gibba HOM05D006685 ORTHO05D008244 3.8e-09 67.8 285 22.5
AagrBONN_evm.TU.Sc2ySwM_228.383 Anthoceros agrestis HOM05D039764 ORTHO05D031174 4.9e-09 67.4 304 24.7
FAN28G0452 Fragaria x ananassa HOM05D006685 ORTHO05D008244 5.5e-08 63.9 57 57.9
CBR_g36358 Chara braunii HOM05D005614 ORTHO05D006759 1.2e-07 62.8 51 56.9
arahy.Tifrunner.gnm1.ann1.6LA5S9 Arachis hypogaea HOM05D002494 ORTHO05D002673 1.8e-06 58.9 30 86.7
arahy.Tifrunner.gnm1.ann1.G2N9P3 Arachis hypogaea HOM05D000296 ORTHO05D008244 8.7e-06 56.6 120 37.5


User provided reference genes

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