Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G2303 Cannabis sativa HOM05D006906 ORTHO05D008578 6.4e-55 217.2 114 100.0
MD08G1211600 Malus domestica HOM05D006906 ORTHO05D008578 6.9e-25 117.5 123 57.7
CSS0004987 Camellia sinensis var. sinensis HOM05D006906 ORTHO05D008578 1.3e-23 113.2 99 62.6
RcHm_v2.0_Chr7g0232161 Rosa chinensis HOM05D006906 ORTHO05D008578 1.3e-23 113.2 108 61.1
Prupe.1G543500 Prunus persica HOM05D006906 ORTHO05D008578 1.9e-22 109.4 120 55.8
Rhsim07G0215600 Rhododendron simsii HOM05D006906 ORTHO05D008578 1.2e-21 106.7 110 52.7
BcaB08g36735 Brassica carinata HOM05D006906 ORTHO05D008578 2.1e-21 105.9 106 59.4
Haze_19024 Corylus avellana HOM05D006906 ORTHO05D008578 3.5e-21 105.1 108 55.6
vmacro04612 Vaccinium macrocarpon HOM05D006906 ORTHO05D008578 3.5e-21 105.1 113 53.1
BcaC04g18752 Brassica carinata HOM05D006906 ORTHO05D008578 4.6e-21 104.8 112 58.9
C09p59250 Brassica napus HOM05D006906 ORTHO05D008578 4.6e-21 104.8 112 58.9
BolC9t58765H Brassica oleracea HOM05D006906 ORTHO05D008578 4.6e-21 104.8 112 58.9
Aa31LG11G11710 Aethionema arabicum HOM05D006906 ORTHO05D008578 7.8e-21 104.0 113 54.9
Cfa020715 Carpinus fangiana HOM05D006906 ORTHO05D008578 1.0e-20 103.6 107 53.3
Dinv01221 Davidia involucrata HOM05D006906 ORTHO05D008578 1.0e-20 103.6 101 57.4
FvH4_5g33440 Fragaria vesca HOM05D006906 ORTHO05D008578 1.0e-20 103.6 116 56.9
FAN18G0347 Fragaria x ananassa HOM05D006906 ORTHO05D008578 1.0e-20 103.6 116 56.9
BcaB01g05160 Brassica carinata HOM05D006906 ORTHO05D008578 1.3e-20 103.2 103 57.3
BolC3t13482H Brassica oleracea HOM05D006906 ORTHO05D008578 1.3e-20 103.2 103 57.3
PGR031G1810 Punica granatum HOM05D006906 ORTHO05D008578 1.3e-20 103.2 99 55.6
AL6G28970 Arabidopsis lyrata HOM05D006906 ORTHO05D008578 1.7e-20 102.8 100 60.0
C03p09940 Brassica napus HOM05D006906 ORTHO05D008578 1.7e-20 102.8 103 60.2
BcaC03g13555 Brassica carinata HOM05D006906 ORTHO05D008578 2.3e-20 102.4 118 56.8
A02p04550 Brassica napus HOM05D006906 ORTHO05D008578 2.3e-20 102.4 109 54.1
BraA03t10177Z Brassica rapa HOM05D006906 ORTHO05D008578 2.3e-20 102.4 100 58.0
Thhalv10015071m.g Eutrema salsugineum HOM05D006906 ORTHO05D008578 2.3e-20 102.4 108 55.6
FAN08G0950 Fragaria x ananassa HOM05D006906 ORTHO05D008578 2.3e-20 102.4 116 56.9
A10p21600 Brassica napus HOM05D006906 ORTHO05D008578 3.0e-20 102.1 113 55.8
BraA02t05416Z Brassica rapa HOM05D006906 ORTHO05D008578 3.0e-20 102.1 101 59.4
Sp6g26380 Schrenkiella parvula HOM05D006906 ORTHO05D008578 3.0e-20 102.1 101 59.4
BolC2t06848H Brassica oleracea HOM05D006906 ORTHO05D008578 3.9e-20 101.7 117 54.7
MD15G1394500 Malus domestica HOM05D006906 ORTHO05D008578 3.9e-20 101.7 124 52.4
AT5G17870 Arabidopsis thaliana HOM05D006906 ORTHO05D008578 5.1e-20 101.3 110 57.3
Hma1.2p1_1068F.1_g254010 Hydrangea macrophylla HOM05D006906 ORTHO05D008578 5.1e-20 101.3 107 56.1
Actinidia19594 Actinidia chinensis HOM05D006906 ORTHO05D008578 6.6e-20 100.9 99 57.6
Thecc.08G080900 Theobroma cacao HOM05D006906 ORTHO05D008578 6.6e-20 100.9 76 64.5
Sabra02G0088700 Salix brachista HOM05D006906 ORTHO05D008578 8.7e-20 100.5 112 51.8
BraA10t44222Z Brassica rapa HOM05D006906 ORTHO05D008578 1.1e-19 100.1 110 53.6
Sed0015154 Sechium edule HOM05D006906 ORTHO05D008578 1.1e-19 100.1 115 52.2
Carub.0006s1610 Capsella rubella HOM05D006906 ORTHO05D008578 1.5e-19 99.8 100 58.0
THA.LOC104806946 Tarenaya hassleriana HOM05D006906 ORTHO05D008578 1.5e-19 99.8 110 51.8
TWI56G0746 Tripterygium wilfordii HOM05D006906 ORTHO05D008578 1.5e-19 99.8 107 52.3
Ah.05g166860 Amaranthus hybridus HOM05D006906 ORTHO05D008578 1.9e-19 99.4 124 49.2
BcaB01g04920 Brassica carinata HOM05D006906 ORTHO05D008578 1.9e-19 99.4 100 56.0
Sc26g0004280 Simmondsia chinensis HOM05D006906 ORTHO05D008578 1.9e-19 99.4 91 58.2
Eucgr.F00111 Eucalyptus grandis HOM05D006906 ORTHO05D008578 2.5e-19 99.0 91 54.9
CARHR195300 Cardamine hirsuta HOM05D006906 ORTHO05D008578 3.3e-19 98.6 103 57.3
Potri.002G112500 Populus trichocarpa HOM05D006906 ORTHO05D008578 3.3e-19 98.6 121 49.6
TAR628G1359 Trochodendron aralioides HOM05D006906 ORTHO05D008578 3.3e-19 98.6 99 58.6
CiPaw.15G153800 Carya illinoinensis HOM05D006906 ORTHO05D008578 4.3e-19 98.2 119 51.3
Manes.18G052450 Manihot esculenta HOM05D006906 ORTHO05D008578 7.3e-19 97.4 112 51.8
SGA_v2.0_scaffold152G36871 Striga asiatica HOM05D006906 ORTHO05D008578 9.6e-19 97.1 97 59.8
HanXRQChr16g0510751 Helianthus annuus HOM05D006906 ORTHO05D008578 2.8e-18 95.5 94 54.3
HanXRQChr16g0510761 Helianthus annuus HOM05D006906 ORTHO05D008578 2.8e-18 95.5 94 54.3
PGSC0003DMG400004936 Solanum tuberosum HOM05D006906 ORTHO05D008578 6.2e-18 94.4 111 51.4
Aqoxy6G01513 Aquilegia oxysepala HOM05D006906 ORTHO05D008578 1.4e-17 93.2 108 49.1
Atru.chr13.910 Acer truncatum HOM05D006906 ORTHO05D008578 1.8e-17 92.8 94 53.2
ClCG11G014950 Citrullus lanatus HOM05D006906 ORTHO05D008578 1.8e-17 92.8 112 49.1
Duzib093G2206 Durio zibethinus HOM05D006906 ORTHO05D008578 1.8e-17 92.8 75 66.7
Sopen04g030750 Solanum pennellii HOM05D006906 ORTHO05D008578 2.4e-17 92.4 111 50.5
Solyc04g077130.1 Solanum lycopersicum HOM05D006906 ORTHO05D008578 3.1e-17 92.0 111 50.5
Duzib116G0588 Durio zibethinus HOM05D006906 ORTHO05D008578 4.0e-17 91.7 82 54.9
EL10Ac1g02326 Beta vulgaris HOM05D006906 ORTHO05D008578 5.3e-17 91.3 118 46.6
AUR62035774 Chenopodium quinoa HOM05D006906 ORTHO05D008578 5.3e-17 91.3 123 44.7
DCAR_012832 Daucus carota HOM05D006906 ORTHO05D008578 5.3e-17 91.3 105 52.4
Duzib116G0218 Durio zibethinus HOM05D006906 ORTHO05D008578 5.3e-17 91.3 78 59.0
QL12p040639 Quercus lobata HOM05D006906 ORTHO05D008578 5.3e-17 91.3 110 50.9
COL.COLO4_35364 Corchorus olitorius HOM05D006906 ORTHO05D008578 6.9e-17 90.9 52 78.8
Cpa.g.sc160.12 Carica papaya HOM05D006906 ORTHO05D008578 9.0e-17 90.5 99 51.5
MELO3C003483.2 Cucumis melo HOM05D006906 ORTHO05D008578 9.0e-17 90.5 112 51.8
Nitab4.5_0002415g0040 Nicotiana tabacum HOM05D006906 ORTHO05D008578 9.0e-17 90.5 98 53.1
CAN.G416.50 Capsicum annuum HOM05D006906 ORTHO05D008578 1.2e-16 90.1 113 48.7
CDE01G0046 Ceratophyllum demersum HOM05D006906 ORTHO05D008578 1.5e-16 89.7 61 67.2
Ciclev10002778m.g Citrus clementina HOM05D006906 ORTHO05D008578 1.5e-16 89.7 113 52.2
Peaxi162Scf00628g00053 Petunia axillaris HOM05D006906 ORTHO05D008578 2.0e-16 89.4 68 67.6
Os11g0550800 Oryza sativa ssp. japonica HOM05D006906 ORTHO05D008578 3.4e-16 88.6 74 62.2
AUR62034964 Chenopodium quinoa HOM05D006906 ORTHO05D008578 5.8e-16 87.8 95 46.3
Lsat_1_v5_gn_6_108161 Lactuca sativa HOM05D006906 ORTHO05D008578 1.3e-15 86.7 121 48.8
MBI16_g41120_MAGBIO Magnolia biondii HOM05D006906 ORTHO05D008578 1.7e-15 86.3 72 61.1
Phvul.009G113500 Phaseolus vulgaris HOM05D006906 ORTHO05D008578 1.7e-15 86.3 96 52.1
Prupe.3G080900 Prunus persica HOM05D006906 ORTHO05D008578 1.7e-15 86.3 80 60.0
Gohir.A05G213900 Gossypium hirsutum HOM05D006906 ORTHO05D008578 2.2e-15 85.9 117 47.0
Nitab4.5_0001614g0100 Nicotiana tabacum HOM05D006906 ORTHO05D008578 2.2e-15 85.9 87 59.8
Gorai.009G224100 Gossypium raimondii HOM05D006906 ORTHO05D008578 2.9e-15 85.5 102 49.0
TWI12G0785 Tripterygium wilfordii HOM05D006906 ORTHO05D008578 2.9e-15 85.5 115 46.1
Glyma.06G089700 Glycine max HOM05D006906 ORTHO05D008578 4.9e-15 84.7 61 67.2
MSTRG.17420 Avicennia marina HOM05D006906 ORTHO05D008578 6.4e-15 84.3 100 50.0
BcaC04g18751 Brassica carinata HOM05D006906 ORTHO05D008578 1.1e-14 83.6 110 52.7
C09p59230 Brassica napus HOM05D006906 ORTHO05D008578 1.1e-14 83.6 110 52.7
Gohir.D05G217300 Gossypium hirsutum HOM05D006906 ORTHO05D008578 1.1e-14 83.6 102 48.0
ATR0767G231 Amborella trichopoda HOM05D006906 ORTHO05D008578 1.4e-14 83.2 54 66.7
BolC9t58763H Brassica oleracea HOM05D006906 ORTHO05D008578 7.1e-14 80.9 96 55.2
PSO675G4379 Papaver somniferum HOM05D006906 ORTHO05D008578 9.3e-14 80.5 118 43.2
Prupe.8G111300 Prunus persica HOM05D006906 ORTHO05D008578 9.3e-14 80.5 69 60.9
ECA246G4410 Erigeron canadensis HOM05D006906 ORTHO05D008578 1.2e-13 80.1 73 56.2
Medtr3g110640 Medicago truncatula HOM05D006906 ORTHO05D008578 2.1e-13 79.3 92 51.1
PSO541G5790 Papaver somniferum HOM05D006906 ORTHO05D008578 2.1e-13 79.3 118 43.2
Psat1g221800 Pisum sativum HOM05D006906 ORTHO05D008578 1.3e-12 76.6 92 51.1
Thhalv10009816m.g Eutrema salsugineum HOM05D006906 ORTHO05D008578 2.3e-12 75.9 67 61.2
SalBow2G0068 Salvia bowleyana HOM05D006906 ORTHO05D008578 2.3e-12 75.9 90 51.1
TPR.G12407 Trifolium pratense HOM05D006906 ORTHO05D008578 3.9e-12 75.1 92 47.8
unitig_21.g20623 Utricularia gibba HOM05D006906 ORTHO05D008578 2.5e-11 72.4 91 50.5
Migut.N02816 Erythranthe guttata HOM05D006906 ORTHO05D008578 5.6e-11 71.2 87 52.9
HPP92_027715 Vanilla planifolia HOM05D006906 ORTHO05D008578 5.6e-11 71.2 70 57.1
HPP92_027718 Vanilla planifolia HOM05D006906 ORTHO05D008578 7.4e-11 70.9 58 63.8
Nn5g30714 Nelumbo nucifera HOM05D006906 ORTHO05D008578 1.3e-10 70.1 95 45.3
Pp3c3_11690 Physcomitrium patens HOM05D006906 ORTHO05D008578 2.4e-09 65.9 90 47.8
Manes.05G185700 Manihot esculenta HOM05D006906 ORTHO05D008578 2.0e-08 62.8 51 58.8
A03p08530 Brassica napus HOM05D006906 ORTHO05D008578 1.7e-07 59.7 102 42.2
BcaB05g23287 Brassica carinata HOM05D006906 ORTHO05D008578 1.1e-06 57.0 101 46.5
Mapoly0090s0093 Marchantia polymorpha HOM05D006906 ORTHO05D008578 5.5e-06 54.7 47 57.4
CBR_g48804 Chara braunii HOM05D006906 ORTHO05D008578 9.3e-06 53.9 69 40.6


User provided reference genes

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