Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G2215 Cannabis sativa HOM05D007518 ORTHO05D008168 2.3e-61 239.2 168 100.0
Rhsim10G0067800 Rhododendron simsii HOM05D007518 ORTHO05D008168 9.7e-36 154.1 169 76.3
CiPaw.02G016200 Carya illinoinensis HOM05D007518 ORTHO05D008168 2.2e-35 152.9 172 73.3
Migut.L00282 Erythranthe guttata HOM05D007518 ORTHO05D008168 3.7e-35 152.1 162 72.2
COL.COLO4_22099 Corchorus olitorius HOM05D007518 ORTHO05D008168 4.8e-35 151.8 171 73.1
CSS0014655 Camellia sinensis var. sinensis HOM05D007518 ORTHO05D008168 8.2e-35 151.0 169 76.3
arahy.Tifrunner.gnm1.ann1.5UMV3I Arachis hypogaea HOM05D007518 ORTHO05D008168 1.1e-34 150.6 168 72.0
RcHm_v2.0_Chr2g0101891 Rosa chinensis HOM05D007518 ORTHO05D008168 2.4e-34 149.4 165 75.2
TWI53G0381 Tripterygium wilfordii HOM05D007518 ORTHO05D008168 2.4e-34 149.4 167 74.9
TAR628G0256 Trochodendron aralioides HOM05D007518 ORTHO05D008168 2.4e-34 149.4 173 70.5
FvH4_1g13510 Fragaria vesca HOM05D007518 ORTHO05D008168 4.1e-34 148.7 168 75.0
FAN19G2612 Fragaria x ananassa HOM05D007518 ORTHO05D008168 4.1e-34 148.7 168 75.0
MD15G1264900 Malus domestica HOM05D007518 ORTHO05D008168 4.1e-34 148.7 169 74.0
Aqoxy6G01075 Aquilegia oxysepala HOM05D007518 ORTHO05D008168 5.3e-34 148.3 156 78.2
Cfa004293 Carpinus fangiana HOM05D007518 ORTHO05D008168 5.3e-34 148.3 167 74.9
Gohir.D03G015500 Gossypium hirsutum HOM05D007518 ORTHO05D008168 5.3e-34 148.3 171 72.5
Gorai.003G015700 Gossypium raimondii HOM05D007518 ORTHO05D008168 7.0e-34 147.9 171 72.5
Sabra07G0023900 Salix brachista HOM05D007518 ORTHO05D008168 7.0e-34 147.9 135 85.9
Cfa004294 Carpinus fangiana HOM05D007518 ORTHO05D008168 9.1e-34 147.5 169 74.6
Gohir.A02G164600 Gossypium hirsutum HOM05D007518 ORTHO05D008168 1.6e-33 146.7 171 72.5
Prupe.7G152700 Prunus persica HOM05D007518 ORTHO05D008168 1.6e-33 146.7 168 74.4
FAN28G1656 Fragaria x ananassa HOM05D007518 ORTHO05D008168 2.0e-33 146.4 168 73.8
Ah.03g139360 Amaranthus hybridus HOM05D007518 ORTHO05D008168 2.7e-33 146.0 162 74.1
Thecc.01G037800 Theobroma cacao HOM05D007518 ORTHO05D008168 3.5e-33 145.6 171 71.9
arahy.Tifrunner.gnm1.ann1.RRU65L Arachis hypogaea HOM05D007518 ORTHO05D008168 4.5e-33 145.2 164 73.2
CsaV3_6G046170 Cucumis sativus L. HOM05D007518 ORTHO05D008168 4.5e-33 145.2 135 85.2
MELO3C007820.2 Cucumis melo HOM05D007518 ORTHO05D008168 5.9e-33 144.8 135 85.2
Atru.chr3.555 Acer truncatum HOM05D007518 ORTHO05D008168 7.7e-33 144.4 171 69.0
Haze_15107 Corylus avellana HOM05D007518 ORTHO05D008168 7.7e-33 144.4 166 74.7
Thhalv10010782m.g Eutrema salsugineum HOM05D007518 ORTHO05D008168 1.7e-32 143.3 163 74.2
Lj2g0015504 Lotus japonicus HOM05D007518 ORTHO05D008168 2.2e-32 142.9 165 70.9
AL5G30840 Arabidopsis lyrata HOM05D007518 ORTHO05D008168 2.9e-32 142.5 162 72.8
Ciclev10026615m.g Citrus clementina HOM05D007518 ORTHO05D008168 2.9e-32 142.5 180 67.8
Lalb_Chr09g0322501 Lupinus albus HOM05D007518 ORTHO05D008168 2.9e-32 142.5 171 71.3
Aa31LG4G18840 Aethionema arabicum HOM05D007518 ORTHO05D008168 3.8e-32 142.1 162 73.5
Potri.007G027400 Populus trichocarpa HOM05D007518 ORTHO05D008168 8.5e-32 141.0 166 71.7
MBI16_g37747_MAGBIO Magnolia biondii HOM05D007518 ORTHO05D008168 1.1e-31 140.6 173 70.5
MD02G1150400 Malus domestica HOM05D007518 ORTHO05D008168 1.1e-31 140.6 166 72.3
Cc07_g09360 Coffea canephora HOM05D007518 ORTHO05D008168 1.5e-31 140.2 175 69.1
AUR62003171 Chenopodium quinoa HOM05D007518 ORTHO05D008168 1.9e-31 139.8 156 74.4
Glyma.11G067100 Glycine max HOM05D007518 ORTHO05D008168 1.9e-31 139.8 169 73.4
Nn1g05049 Nelumbo nucifera HOM05D007518 ORTHO05D008168 3.2e-31 139.0 169 72.2
TPR.G28676 Trifolium pratense HOM05D007518 ORTHO05D008168 5.5e-31 138.3 169 71.0
Carub.0005s1701 Capsella rubella HOM05D007518 ORTHO05D008168 7.2e-31 137.9 164 72.6
A06p05270 Brassica napus HOM05D007518 ORTHO05D008168 9.4e-31 137.5 165 72.7
BraA06t23735Z Brassica rapa HOM05D007518 ORTHO05D008168 9.4e-31 137.5 165 72.7
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 9.4e-31 137.5 134 82.8
QL06p045656 Quercus lobata HOM05D007518 ORTHO05D008168 9.4e-31 137.5 165 70.3
Sed0026205 Sechium edule HOM05D007518 ORTHO05D008168 9.4e-31 137.5 147 78.9
CARHR160200 Cardamine hirsuta HOM05D007518 ORTHO05D008168 2.1e-30 136.3 165 71.5
Lsat_1_v5_gn_3_78660 Lactuca sativa HOM05D007518 ORTHO05D008168 2.1e-30 136.3 172 70.3
BolC5t29390H Brassica oleracea HOM05D007518 ORTHO05D008168 2.7e-30 136.0 165 71.5
C05p06340 Brassica napus HOM05D007518 ORTHO05D008168 3.6e-30 135.6 165 71.5
Sp5g11540 Schrenkiella parvula HOM05D007518 ORTHO05D008168 4.7e-30 135.2 163 69.9
CAN.G1028.6 Capsicum annuum HOM05D007518 ORTHO05D008168 6.1e-30 134.8 168 69.6
Oeu007443.1 Olea europaea HOM05D007518 ORTHO05D008168 8.0e-30 134.4 169 69.8
Medtr5g019920 Medicago truncatula HOM05D007518 ORTHO05D008168 1.0e-29 134.0 171 71.9
AT3G50685 Arabidopsis thaliana HOM05D007518 ORTHO05D008168 1.4e-29 133.7 163 70.6
HanXRQChr16g0530261 Helianthus annuus HOM05D007518 ORTHO05D008168 1.4e-29 133.7 152 75.7
Solyc03g034070.1 Solanum lycopersicum HOM05D007518 ORTHO05D008168 1.4e-29 133.7 114 90.4
Sopen03g006850 Solanum pennellii HOM05D007518 ORTHO05D008168 1.4e-29 133.7 114 90.4
VMungo1215G2461 Vigna mungo HOM05D007518 ORTHO05D008168 1.4e-29 133.7 135 79.3
DCAR_021444 Daucus carota HOM05D007518 ORTHO05D008168 2.3e-29 132.9 171 70.2
Nitab4.5_0016476g0010 Nicotiana tabacum HOM05D007518 ORTHO05D008168 2.3e-29 132.9 130 82.3
Eucgr.I02457 Eucalyptus grandis HOM05D007518 ORTHO05D008168 3.0e-29 132.5 169 69.8
THA.LOC104821280 Tarenaya hassleriana HOM05D007518 ORTHO05D008168 4.0e-29 132.1 167 70.1
Phvul.002G029100 Phaseolus vulgaris HOM05D007518 ORTHO05D008168 5.2e-29 131.7 171 69.6
Manes.01G134000 Manihot esculenta HOM05D007518 ORTHO05D008168 6.8e-29 131.3 168 69.0
PSO541G1957 Papaver somniferum HOM05D007518 ORTHO05D008168 6.8e-29 131.3 137 78.8
PGR119G2546 Punica granatum HOM05D007518 ORTHO05D008168 8.8e-29 131.0 167 70.7
PGSC0003DMG400017778 Solanum tuberosum HOM05D007518 ORTHO05D008168 2.0e-28 129.8 162 71.6
PSO675G1394 Papaver somniferum HOM05D007518 ORTHO05D008168 2.6e-28 129.4 175 66.9
Lj2P450T11 Lonicera japonica HOM05D007518 ORTHO05D008168 4.4e-28 128.6 133 83.5
Sc03g0000780 Simmondsia chinensis HOM05D007518 ORTHO05D008168 2.8e-27 125.9 170 68.8
Nitab4.5_0001038g0130 Nicotiana tabacum HOM05D007518 ORTHO05D008168 1.8e-26 123.2 130 79.2
Actinidia12117 Actinidia chinensis HOM05D007518 ORTHO05D008168 3.1e-26 122.5 107 66.4
Mapoly0168s0019 Marchantia polymorpha HOM05D007518 ORTHO05D008168 4.1e-26 122.1 137 75.9
SGA_v2.0_scaffold248G44914 Striga asiatica HOM05D007518 ORTHO05D008168 9.1e-26 120.9 162 67.9
Peaxi162Scf00751g00045 Petunia axillaris HOM05D007518 ORTHO05D008168 1.6e-25 120.2 130 66.2
unitig_62.g23458 Utricularia gibba HOM05D007518 ORTHO05D008168 2.7e-25 119.4 124 77.4
Ca_00386_v3 Cicer arietinum L. HOM05D007518 ORTHO05D008168 3.5e-25 119.0 130 62.3
Pp3c15_7720 Physcomitrium patens HOM05D007518 ORTHO05D008168 1.0e-24 117.5 116 77.6
BcaB07g34066 Brassica carinata HOM05D007518 ORTHO05D008168 1.3e-24 117.1 183 44.8
ECA246G0481 Erigeron canadensis HOM05D000085 ORTHO05D000274 3.2e-23 112.5 134 75.4
Dinv26823 Davidia involucrata HOM05D002420 ORTHO05D002422 4.2e-23 112.1 159 66.7
Duzib187G0536 Durio zibethinus HOM05D007518 ORTHO05D008168 7.2e-23 111.3 109 64.2
Psat2g160680 Pisum sativum HOM05D007518 ORTHO05D008168 6.1e-22 108.2 123 78.0
SMO361G0359 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 2.3e-21 106.3 113 75.2
SEGI_19868 Sequoiadendron giganteum HOM05D007518 ORTHO05D008168 4.0e-21 105.5 172 61.6
ATR0733G025 Amborella trichopoda HOM05D007518 ORTHO05D008168 1.2e-20 104.0 132 70.5
HPP92_023606 Vanilla planifolia HOM05D007518 ORTHO05D008168 1.5e-20 103.6 152 65.1
BcaB07g34065 Brassica carinata HOM05D007518 ORTHO05D008168 2.0e-20 103.2 102 62.7
CBR_g37409 Chara braunii HOM05D007518 ORTHO05D008168 6.3e-19 98.2 112 47.3
AagrBONN_evm.TU.Sc2ySwM_228.2926 Anthoceros agrestis HOM05D007518 ORTHO05D008168 3.8e-16 89.0 127 69.3
Zm00001eb098970 Zea mays HOM05D007518 ORTHO05D008168 8.6e-16 87.8 123 69.1
Actinidia02774 Actinidia chinensis HOM05D007518 ORTHO05D008168 1.5e-15 87.0 131 46.6
unitig_65.g29889 Utricularia gibba HOM05D007518 ORTHO05D008168 1.0e-13 80.9 89 69.7
PRCOL_00004191 Prasinoderma coloniale HOM05D007518 ORTHO05D008168 2.6e-12 76.3 130 60.0
SMO361G0415 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 2.2e-11 73.2 100 40.0
Os10g0213700 Oryza sativa ssp. japonica HOM05D007518 ORTHO05D008168 4.1e-10 68.9 138 60.9
Cre01.g043200 Chlamydomonas reinhardtii HOM05D007518 ORTHO05D008168 3.5e-09 65.9 73 50.7
MCO12G314 Micromonas commoda HOM05D007518 ORTHO05D008168 1.0e-08 64.3 78 46.2


User provided reference genes

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