Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G2134 Cannabis sativa HOM05D007399 ORTHO05D009341 1.0e-99 366.7 184 100.0
CANSAT01G0413 Cannabis sativa HOM05D007399 ORTHO05D009341 2.9e-94 348.6 179 97.8
CANSAT01G1231 Cannabis sativa HOM05D007399 ORTHO05D009341 8.6e-70 267.3 137 97.1
CANSAT01G2481 Cannabis sativa HOM05D007399 ORTHO05D009341 8.9e-67 257.3 141 92.9
VMungo0331G1622 Vigna mungo HOM05D007399 ORTHO05D009341 1.8e-35 153.3 201 48.8
Prupe.8G200700 Prunus persica HOM05D007399 ORTHO05D009341 1.2e-31 140.6 221 43.0
Lj3g0000647 Lotus japonicus HOM05D007399 ORTHO05D009341 2.1e-31 139.8 198 47.5
Phvul.010G020400 Phaseolus vulgaris HOM05D007399 ORTHO05D009341 2.1e-31 139.8 217 44.2
AL3G18400 Arabidopsis lyrata HOM05D007399 ORTHO05D009341 4.6e-31 138.7 196 43.9
Duzib133G1013 Durio zibethinus HOM05D007399 ORTHO05D009341 5.1e-30 135.2 202 42.6
QL09p052198 Quercus lobata HOM05D007399 ORTHO05D009341 4.3e-29 132.1 214 39.3
GSVIVG01003279001 Vitis vinifera HOM05D007399 ORTHO05D009341 9.7e-29 131.0 142 50.7
AT3G07150 Arabidopsis thaliana HOM05D007399 ORTHO05D009341 2.8e-28 129.4 203 41.4
QL09p053062 Quercus lobata HOM05D007399 ORTHO05D009341 4.8e-28 128.6 138 50.0
Glyma.16G101000 Glycine max HOM05D007399 ORTHO05D009341 6.3e-28 128.3 192 41.1
Peaxi162Scf00398g00810 Petunia axillaris HOM05D007399 ORTHO05D009341 8.2e-28 127.9 175 41.7
CARHR081750 Cardamine hirsuta HOM05D007399 ORTHO05D009341 1.8e-27 126.7 109 57.8
Carub.0003s0667 Capsella rubella HOM05D007399 ORTHO05D009341 2.4e-27 126.3 208 40.9
Migut.D02494 Erythranthe guttata HOM05D007399 ORTHO05D009341 3.1e-27 125.9 222 37.4
Dinv19187 Davidia involucrata HOM05D007399 ORTHO05D009341 5.3e-27 125.2 158 43.7
TWI18G0746 Tripterygium wilfordii HOM05D007399 ORTHO05D009341 5.3e-27 125.2 194 43.8
Nn1g07919 Nelumbo nucifera HOM05D007399 ORTHO05D009341 6.9e-27 124.8 98 61.2
Hund05568 Selenicereus undatus HOM05D007399 ORTHO05D009341 9.0e-27 124.4 180 38.9
BcaC05g29751 Brassica carinata HOM05D007399 ORTHO05D009341 1.2e-26 124.0 201 40.8
Potri.002G244400 Populus trichocarpa HOM05D007399 ORTHO05D009341 1.2e-26 124.0 142 49.3
TAR362G0473 Trochodendron aralioides HOM05D007399 ORTHO05D009341 3.4e-26 122.5 146 49.3
MD05G1173200 Malus domestica HOM05D007399 ORTHO05D009341 4.5e-26 122.1 202 43.6
Ciclev10022115m.g Citrus clementina HOM05D007399 ORTHO05D009341 5.9e-26 121.7 223 38.1
Aa31LG5G17710 Aethionema arabicum HOM05D007399 ORTHO05D009341 7.7e-26 121.3 214 39.7
Oeu037382.1 Olea europaea HOM05D007399 ORTHO05D009341 7.7e-26 121.3 163 42.9
Nitab4.5_0000045g0320 Nicotiana tabacum HOM05D007399 ORTHO05D009341 1.0e-25 120.9 223 35.9
TPR.G17137 Trifolium pratense HOM05D007399 ORTHO05D009341 1.0e-25 120.9 226 39.8
Sabra02G0185900 Salix brachista HOM05D007399 ORTHO05D009341 1.3e-25 120.6 152 45.4
ECA248G2789 Erigeron canadensis HOM05D007399 ORTHO05D009341 1.7e-25 120.2 165 43.6
ClCG09G008880 Citrullus lanatus HOM05D007399 ORTHO05D009341 2.2e-25 119.8 114 53.5
Gohir.D11G145400 Gossypium hirsutum HOM05D007399 ORTHO05D009341 2.9e-25 119.4 240 33.8
Gohir.A11G139200 Gossypium hirsutum HOM05D007399 ORTHO05D009341 3.8e-25 119.0 240 34.2
Manes.13G046300 Manihot esculenta HOM05D007399 ORTHO05D009341 3.8e-25 119.0 178 43.8
Cc01_g16850 Coffea canephora HOM05D007399 ORTHO05D009341 5.0e-25 118.6 107 54.2
Haze_24850 Corylus avellana HOM05D007399 ORTHO05D009341 8.5e-25 117.9 138 47.1
Atru.chr6.1505 Acer truncatum HOM05D007399 ORTHO05D009341 1.1e-24 117.5 92 59.8
Ah.08g214480 Amaranthus hybridus HOM05D007399 ORTHO05D009341 1.1e-24 117.5 140 45.7
QL09p053453 Quercus lobata HOM05D007399 ORTHO05D009341 1.1e-24 117.5 138 48.6
COL.COLO4_15647 Corchorus olitorius HOM05D007399 ORTHO05D009341 1.4e-24 117.1 138 48.6
Medtr8g013040 Medicago truncatula HOM05D007399 ORTHO05D009341 1.9e-24 116.7 227 39.6
BraA05t22833Z Brassica rapa HOM05D007399 ORTHO05D009341 2.5e-24 116.3 207 39.6
Thecc.01G222700 Theobroma cacao HOM05D007399 ORTHO05D009341 2.5e-24 116.3 139 46.8
Thhalv10022223m.g Eutrema salsugineum HOM05D007399 ORTHO05D009341 4.2e-24 115.5 131 49.6
HanXRQChr01g0015211 Helianthus annuus HOM05D007399 ORTHO05D009341 4.2e-24 115.5 199 39.2
SHI28622 Sapria himalayana HOM05D000002 ORTHO05D000001 4.2e-24 115.5 112 51.8
A05p41060 Brassica napus HOM05D007399 ORTHO05D009341 5.5e-24 115.2 207 39.1
PGR083G1511 Punica granatum HOM05D007399 ORTHO05D009341 5.5e-24 115.2 208 37.5
C05p60230 Brassica napus HOM05D007399 ORTHO05D009341 7.2e-24 114.8 207 39.1
Gorai.007G155900 Gossypium raimondii HOM05D007399 ORTHO05D009341 1.2e-23 114.0 112 47.3
Rhsim01G0254900 Rhododendron simsii HOM05D007399 ORTHO05D009341 1.2e-23 114.0 100 56.0
Sp3g06090 Schrenkiella parvula HOM05D007399 ORTHO05D009341 1.2e-23 114.0 199 40.2
Cpa.g.sc8.134 Carica papaya HOM05D007399 ORTHO05D009341 1.6e-23 113.6 131 47.3
DCAR_000523 Daucus carota HOM05D007399 ORTHO05D009341 1.6e-23 113.6 100 58.0
Sopen09g023130 Solanum pennellii HOM05D007399 ORTHO05D009341 1.6e-23 113.6 231 33.8
Nitab4.5_0000345g0070 Nicotiana tabacum HOM05D007399 ORTHO05D009341 2.1e-23 113.2 194 41.2
BolC5t34673H Brassica oleracea HOM05D007399 ORTHO05D009341 2.7e-23 112.8 207 38.6
Solyc09g059950.3 Solanum lycopersicum HOM05D007399 ORTHO05D009341 2.7e-23 112.8 231 33.3
BcaC05g29843 Brassica carinata HOM05D007399 ORTHO05D009341 3.6e-23 112.5 206 37.9
Oeu037384.1 Olea europaea HOM05D007399 ORTHO05D009341 3.6e-23 112.5 106 51.9
Psat4g199960 Pisum sativum HOM05D007399 ORTHO05D009341 3.6e-23 112.5 220 38.2
arahy.Tifrunner.gnm1.ann1.5JJB2W Arachis hypogaea HOM05D007399 ORTHO05D009341 6.1e-23 111.7 107 53.3
CSS0020487 Camellia sinensis var. sinensis HOM05D007399 ORTHO05D009341 7.9e-23 111.3 102 55.9
arahy.Tifrunner.gnm1.ann1.YE6SLX Arachis hypogaea HOM05D007399 ORTHO05D009341 1.4e-22 110.5 234 35.5
Cfa002599 Carpinus fangiana HOM05D007399 ORTHO05D009341 1.8e-22 110.2 204 37.7
Eucgr.H00781 Eucalyptus grandis HOM05D007399 ORTHO05D009341 2.3e-22 109.8 99 53.5
Lalb_Chr12g0209951 Lupinus albus HOM05D007399 ORTHO05D009341 2.3e-22 109.8 109 53.2
CiPaw.03G147600 Carya illinoinensis HOM05D007399 ORTHO05D009341 3.9e-22 109.0 131 44.3
FAN15G3119 Fragaria x ananassa HOM05D007399 ORTHO05D009341 3.9e-22 109.0 207 37.2
Lsat_1_v5_gn_5_180581 Lactuca sativa HOM05D007399 ORTHO05D009341 3.9e-22 109.0 156 42.3
Lj2A1128G40 Lonicera japonica HOM05D007399 ORTHO05D009341 5.1e-22 108.6 88 61.4
CAN.G3.2 Capsicum annuum HOM05D007399 ORTHO05D009341 1.1e-21 107.5 166 41.6
Actinidia09475 Actinidia chinensis HOM05D007399 ORTHO05D009341 2.0e-21 106.7 185 37.8
RcHm_v2.0_Chr6g0284361 Rosa chinensis HOM05D007399 ORTHO05D009341 3.3e-21 105.9 218 37.2
Sed0009642 Sechium edule HOM05D007399 ORTHO05D009341 4.3e-21 105.5 162 37.7
PGSC0003DMG401023104 Solanum tuberosum HOM05D007399 ORTHO05D009341 4.3e-21 105.5 103 51.5
EL10Ac7g17870 Beta vulgaris HOM05D007399 ORTHO05D009341 5.7e-21 105.1 91 53.8
SalBow6G3187 Salvia bowleyana HOM05D007399 ORTHO05D009341 1.3e-20 104.0 192 35.9
SalBow6G3685 Salvia bowleyana HOM05D007399 ORTHO05D009341 1.3e-20 104.0 192 35.9
THA.LOC104802666 Tarenaya hassleriana HOM05D007399 ORTHO05D009341 1.3e-20 104.0 101 52.5
FvH4_2g18740 Fragaria vesca HOM05D007399 ORTHO05D009341 1.7e-20 103.6 123 48.0
FAN24G1833 Fragaria x ananassa HOM05D007399 ORTHO05D009341 1.7e-20 103.6 123 48.0
AUR62001112 Chenopodium quinoa HOM05D007399 ORTHO05D009341 4.8e-20 102.1 179 36.3
MELO3C021053.2 Cucumis melo HOM05D007399 ORTHO05D009341 4.8e-20 102.1 135 45.9
CsaV3_7G026010 Cucumis sativus L. HOM05D007399 ORTHO05D009341 9.1e-19 97.8 164 36.6
PSO357G0666 Papaver somniferum HOM05D007399 ORTHO05D009341 9.1e-19 97.8 130 40.8
FAN27G2185 Fragaria x ananassa HOM05D007399 ORTHO05D009341 2.6e-18 96.3 137 43.1
Sc24g0003500 Simmondsia chinensis HOM05D007399 ORTHO05D009341 4.5e-18 95.5 142 38.0
PSO170G3887 Papaver somniferum HOM05D007399 ORTHO05D009341 1.0e-17 94.4 153 37.3
CDE06G2632 Ceratophyllum demersum HOM05D007399 ORTHO05D009341 5.0e-17 92.0 93 52.7
AUR62008936 Chenopodium quinoa HOM05D007399 ORTHO05D009341 4.2e-16 89.0 164 36.6
Hund20426 Selenicereus undatus HOM05D007399 ORTHO05D009341 2.6e-13 79.7 81 48.1
ATR0609G108 Amborella trichopoda HOM05D007399 ORTHO05D009341 2.8e-12 76.3 90 46.7
SEGI_10803 Sequoiadendron giganteum HOM05D007399 ORTHO05D009341 9.1e-11 71.2 90 40.0
Actinidia23717 Actinidia chinensis HOM05D007399 ORTHO05D009341 1.6e-10 70.5 235 29.8
Os01g0918400 Oryza sativa ssp. japonica HOM05D007399 ORTHO05D009341 3.5e-10 69.3 65 47.7
HPP92_011779 Vanilla planifolia HOM05D007399 ORTHO05D009341 1.2e-07 60.8 123 30.1
Zm00001eb364650 Zea mays HOM05D007399 ORTHO05D009341 4.7e-07 58.9 65 40.0


User provided reference genes

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