Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G2071 Cannabis sativa HOM05D007715 ORTHO05D009760 2.7e-143 511.9 243 100.0
Manes.14G008300 Manihot esculenta HOM05D007715 ORTHO05D009760 5.2e-115 417.9 236 79.7
RcHm_v2.0_Chr2g0149371 Rosa chinensis HOM05D007715 ORTHO05D009760 8.9e-115 417.2 237 81.0
MD09G1165400 Malus domestica HOM05D007715 ORTHO05D009760 5.8e-114 414.5 239 79.9
FvH4_6g36931 Fragaria vesca HOM05D007715 ORTHO05D009760 1.3e-113 413.3 237 79.3
Haze_16178 Corylus avellana HOM05D007715 ORTHO05D009760 3.7e-113 411.8 230 80.9
FAN14G5785 Fragaria x ananassa HOM05D007715 ORTHO05D009760 8.3e-113 410.6 239 78.7
FAN05G4144 Fragaria x ananassa HOM05D007715 ORTHO05D009760 1.1e-112 410.2 237 79.3
Cfa003439 Carpinus fangiana HOM05D007715 ORTHO05D009760 4.1e-112 408.3 230 80.0
Ciclev10032622m.g Citrus clementina HOM05D007715 ORTHO05D009760 1.6e-111 406.4 237 78.5
Eucgr.F04031 Eucalyptus grandis HOM05D007715 ORTHO05D009760 2.7e-111 405.6 237 78.9
TAR383G0241 Trochodendron aralioides HOM05D007715 ORTHO05D009760 4.6e-111 404.8 231 79.7
FAN09G0474 Fragaria x ananassa HOM05D007715 ORTHO05D009760 1.3e-110 403.3 237 77.6
FAN02G3529 Fragaria x ananassa HOM05D007715 ORTHO05D009760 3.0e-110 402.1 237 78.1
Thecc.06G056700 Theobroma cacao HOM05D007715 ORTHO05D009760 8.6e-110 400.6 237 76.8
MD17G1162300 Malus domestica HOM05D007715 ORTHO05D009760 9.5e-109 397.1 225 80.4
Gorai.010G141800 Gossypium raimondii HOM05D007715 ORTHO05D009760 6.2e-108 394.4 237 75.9
Gohir.D06G121500 Gossypium hirsutum HOM05D007715 ORTHO05D009760 1.1e-107 393.7 233 76.8
Potri.008G004500 Populus trichocarpa HOM05D007715 ORTHO05D009760 1.1e-107 393.7 231 77.9
Nn2g12750 Nelumbo nucifera HOM05D007715 ORTHO05D009760 1.4e-107 393.3 243 74.5
Duzib235G0054 Durio zibethinus HOM05D007715 ORTHO05D009760 8.9e-107 390.6 238 76.1
MBI16_g18218_MAGBIO Magnolia biondii HOM05D007715 ORTHO05D009760 2.6e-106 389.0 241 73.0
CSS0043564 Camellia sinensis var. sinensis HOM05D007715 ORTHO05D009760 1.7e-105 386.3 229 76.9
CiPaw.02G129300 Carya illinoinensis HOM05D007715 ORTHO05D009760 2.9e-105 385.6 228 76.3
vmacro18742 Vaccinium macrocarpon HOM05D007715 ORTHO05D009760 6.4e-105 384.4 240 74.6
Hma1.2p1_1111F.1_g258440 Hydrangea macrophylla HOM05D007715 ORTHO05D009760 8.4e-105 384.0 237 75.1
PGR102G0299 Punica granatum HOM05D007715 ORTHO05D009760 1.9e-104 382.9 236 74.2
GSVIVG01029551001 Vitis vinifera HOM05D007715 ORTHO05D009760 3.2e-104 382.1 237 74.3
Atru.BG.168.p Acer truncatum HOM05D007715 ORTHO05D009760 1.2e-103 380.2 211 81.0
Aqoxy7G02738 Aquilegia oxysepala HOM05D007715 ORTHO05D009760 1.2e-103 380.2 234 72.2
Actinidia38809 Actinidia chinensis HOM05D007715 ORTHO05D009760 1.0e-102 377.1 240 72.9
QL05p088896 Quercus lobata HOM05D007715 ORTHO05D009760 6.6e-102 374.4 292 61.3
Oeu049631.2 Olea europaea HOM05D007715 ORTHO05D009760 1.2e-100 370.2 237 70.9
Oeu049632.1 Olea europaea HOM05D007715 ORTHO05D009760 1.2e-100 370.2 237 70.9
Sc12g0011180 Simmondsia chinensis HOM05D007715 ORTHO05D009760 2.1e-100 369.4 224 74.1
EL10Ac7g18154 Beta vulgaris HOM05D007715 ORTHO05D009760 1.8e-99 366.3 227 73.6
Cpa.g.sc176.1 Carica papaya HOM05D007715 ORTHO05D009760 3.1e-99 365.5 256 64.8
CiPaw.01G208900 Carya illinoinensis HOM05D007715 ORTHO05D009760 5.3e-99 364.8 227 73.1
AUR62025668 Chenopodium quinoa HOM05D007715 ORTHO05D009760 5.8e-98 361.3 231 71.9
Cc04_g00030 Coffea canephora HOM05D007715 ORTHO05D009760 7.6e-98 360.9 230 73.0
PSO423G0174 Papaver somniferum HOM05D007715 ORTHO05D009760 1.7e-97 359.8 225 71.6
Hund18594 Selenicereus undatus HOM05D007715 ORTHO05D009760 8.4e-97 357.5 249 67.5
AUR62001337 Chenopodium quinoa HOM05D007715 ORTHO05D009760 1.1e-96 357.1 231 71.0
Lsat_1_v5_gn_4_89140 Lactuca sativa HOM05D007715 ORTHO05D009760 2.4e-96 355.9 239 68.6
SalBow6G7190 Salvia bowleyana HOM05D007715 ORTHO05D009760 1.2e-95 353.6 237 65.0
ATR0626G044 Amborella trichopoda HOM05D007715 ORTHO05D009760 1.7e-94 349.7 226 69.0
CDE05G1192 Ceratophyllum demersum HOM05D007715 ORTHO05D004987 1.7e-94 349.7 230 68.7
Medtr4g005360 Medicago truncatula HOM05D007715 ORTHO05D009760 6.6e-94 347.8 221 70.1
SGA_v2.0_scaffold71G23984 Striga asiatica HOM05D007715 ORTHO05D009760 9.0e-91 337.4 237 64.1
PGSC0003DMG400009165 Solanum tuberosum HOM05D007715 ORTHO05D009760 1.5e-90 336.7 231 67.5
Rhsim08G0250500 Rhododendron simsii HOM05D007715 ORTHO05D009760 2.2e-89 332.8 222 69.8
Lj3g0002381 Lotus japonicus HOM05D007715 ORTHO05D009760 1.1e-88 330.5 234 65.0
Zm00001eb102140 Zea mays HOM05D007715 ORTHO05D009760 3.2e-88 328.9 224 64.3
Lalb_Chr01g0011671 Lupinus albus HOM05D007715 ORTHO05D009760 1.2e-87 327.0 239 64.9
Psat7g265440 Pisum sativum HOM05D007715 ORTHO05D009760 2.7e-87 325.9 222 65.8
HPP92_017384 Vanilla planifolia HOM05D007715 ORTHO05D009760 6.0e-87 324.7 205 68.8
Migut.I01201 Erythranthe guttata HOM05D007715 ORTHO05D009760 1.3e-86 323.6 235 63.0
Sabra08G0002100 Salix brachista HOM05D007715 ORTHO05D009760 3.9e-86 322.0 223 68.2
SEGI_32597 Sequoiadendron giganteum HOM05D007715 ORTHO05D009760 5.1e-86 321.6 229 65.5
Glyma.08G224700 Glycine max HOM05D007715 ORTHO05D009760 3.4e-82 308.9 229 63.8
Duzib192G0685 Durio zibethinus HOM05D007715 ORTHO05D009760 9.9e-82 307.4 175 79.4
Sp3g18290 Schrenkiella parvula HOM05D007715 ORTHO05D009760 9.9e-82 307.4 227 60.4
AagrBONN_evm.TU.Sc2ySwM_228.4113 Anthoceros agrestis HOM05D007715 ORTHO05D009760 6.0e-79 298.1 224 58.9
C05p44060 Brassica napus HOM05D007715 ORTHO05D009760 4.3e-77 292.0 245 54.3
Thhalv10020156m.g Eutrema salsugineum HOM05D003198 ORTHO05D009760 6.2e-76 288.1 231 57.6
Mapoly0008s0087 Marchantia polymorpha HOM05D007715 ORTHO05D009760 6.9e-75 284.6 228 58.8
Pp3c3_690 Physcomitrium patens HOM05D007715 ORTHO05D009760 6.9e-75 284.6 221 57.9
VMungo0331G1382 Vigna mungo HOM05D007715 ORTHO05D009760 4.5e-74 282.0 232 59.1
Nitab4.5_0005739g0020 Nicotiana tabacum HOM05D007715 ORTHO05D009760 1.3e-73 280.4 180 72.2
A05p28660 Brassica napus HOM05D007715 ORTHO05D009760 2.9e-73 279.3 225 55.6
BraA05t21742Z Brassica rapa HOM05D007715 ORTHO05D009760 1.9e-72 276.6 225 55.1
BolC5t33128H Brassica oleracea HOM05D007715 ORTHO05D009760 9.3e-72 274.2 228 54.4
FAN20G1905 Fragaria x ananassa HOM05D007715 ORTHO05D009760 1.6e-71 273.5 156 82.1
MSTRG.22499 Avicennia marina HOM05D007715 ORTHO05D009760 2.5e-69 266.2 188 65.4
Phvul.010G164200 Phaseolus vulgaris HOM05D007715 ORTHO05D009760 1.8e-67 260.0 232 54.3
Lj9C542G6 Lonicera japonica HOM05D007715 ORTHO05D009760 3.2e-64 249.2 221 56.1
Dinv20335 Davidia involucrata HOM05D007715 ORTHO05D009760 3.6e-55 219.2 135 74.8
Prupe.3G023100 Prunus persica HOM05D007715 ORTHO05D009760 3.6e-55 219.2 123 81.3
Gohir.A06G117200 Gossypium hirsutum HOM05D007715 ORTHO05D009760 2.3e-54 216.5 136 72.8
PSO423G0098 Papaver somniferum HOM05D007715 ORTHO05D009760 1.1e-51 207.6 136 67.6
COL.COLO4_31152 Corchorus olitorius HOM05D007715 ORTHO05D009760 9.1e-51 204.5 109 83.5
Nitab4.5_0005664g0070 Nicotiana tabacum HOM05D007715 ORTHO05D009760 9.4e-48 194.5 203 50.2
SMO201G0133 Selaginella moellendorffii HOM05D007715 ORTHO05D009760 2.2e-44 183.3 194 48.5
Peaxi162Scf00038g02642 Petunia axillaris HOM05D007715 ORTHO05D009760 5.3e-43 178.7 102 79.4
Carub.0003s2020 Capsella rubella HOM05D007715 ORTHO05D009760 7.7e-42 174.9 132 57.6
Actinidia21887 Actinidia chinensis HOM05D007702 ORTHO05D009736 1.8e-35 153.7 140 54.3
TPR.G38750 Trifolium pratense HOM05D007715 ORTHO05D009760 1.8e-22 110.5 85 55.3
Sopen03g041710 Solanum pennellii HOM05D007715 ORTHO05D009760 5.2e-22 109.0 211 37.0
Os09g0497600 Oryza sativa ssp. japonica HOM05D007715 ORTHO05D009760 4.4e-21 105.9 76 56.6
Actinidia21654 Actinidia chinensis HOM05D007715 ORTHO05D009760 6.3e-20 102.1 107 53.3
Medtr4g005380 Medicago truncatula HOM05D007715 ORTHO05D009760 1.1e-19 101.3 79 50.6
TPR.G38822 Trifolium pratense HOM05D007715 ORTHO05D009760 1.4e-19 100.9 86 55.8
Psat7g265240 Pisum sativum HOM05D007122 ORTHO05D008918 1.6e-18 97.4 58 75.9
AL3G33970 Arabidopsis lyrata HOM05D007715 ORTHO05D009760 3.3e-08 63.2 49 57.1
Solyc03g123970.1 Solanum lycopersicum HOM05D007715 ORTHO05D009760 4.7e-07 59.3 52 63.5


User provided reference genes

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