Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G2012 Cannabis sativa HOM05D000017 ORTHO05D021215 5.4e-198 694.1 348 100.0
CANSAT21G1850 Cannabis sativa HOM05D000017 ORTHO05D000013 2.1e-189 665.6 337 97.9
CANSAT11G1061 Cannabis sativa HOM05D000017 ORTHO05D000013 1.7e-183 646.0 332 97.3
ATR0648G001 Amborella trichopoda HOM05D000017 ORTHO05D021215 3.1e-121 439.1 344 64.8
CANSAT01G2587 Cannabis sativa HOM05D000017 ORTHO05D000013 1.2e-115 420.6 346 62.7
CANSAT25G2383 Cannabis sativa HOM05D000017 ORTHO05D000013 9.2e-113 411.0 320 68.1
ATR0137G001 Amborella trichopoda HOM05D000017 ORTHO05D021215 1.5e-107 393.7 204 96.6
CANSAT19G0002 Cannabis sativa HOM05D000017 ORTHO05D000013 1.2e-83 314.3 315 54.6
CANSAT78G1157 Cannabis sativa HOM05D000017 ORTHO05D021215 1.0e-79 301.2 160 93.8
CANSAT54G1288 Cannabis sativa HOM05D000017 ORTHO05D000013 3.0e-79 299.7 197 77.7
CANSAT80G0369 Cannabis sativa HOM05D000017 ORTHO05D000013 4.8e-69 265.8 332 49.7
CANSAT01G3024 Cannabis sativa HOM05D000017 ORTHO05D021215 4.4e-67 259.2 137 94.9
CANSAT11G1110 Cannabis sativa HOM05D000017 ORTHO05D021215 4.9e-66 255.8 137 94.9
CANSAT78G0589 Cannabis sativa HOM05D000017 ORTHO05D000013 1.3e-58 231.1 192 63.0
CANSAT11G0516 Cannabis sativa HOM05D000017 ORTHO05D000013 2.5e-54 216.9 248 51.2
CANSAT11G0629 Cannabis sativa HOM05D000017 ORTHO05D000013 4.8e-53 212.6 383 39.7
ATR0915G001 Amborella trichopoda HOM05D000017 ORTHO05D000013 8.5e-42 175.3 390 36.7
CANSAT56G3474 Cannabis sativa HOM05D000017 ORTHO05D000013 9.7e-38 161.8 207 46.4
CANSAT78G1676 Cannabis sativa HOM05D000017 ORTHO05D000013 1.8e-28 131.0 251 39.4
CANSAT11G0295 Cannabis sativa HOM05D000017 ORTHO05D000013 3.8e-26 123.2 173 43.4
CANSAT21G2374 Cannabis sativa HOM05D000017 ORTHO05D000013 2.7e-24 117.1 69 75.4
CANSAT64G0218 Cannabis sativa HOM05D000017 ORTHO05D000013 4.7e-24 116.3 270 33.7
CANSAT01G1186 Cannabis sativa HOM05D000017 ORTHO05D000013 1.2e-16 91.7 91 48.4
CANSAT01G0268 Cannabis sativa HOM05D000017 ORTHO05D000013 6.7e-15 85.9 39 97.4
CANSAT78G0407 Cannabis sativa HOM05D000017 ORTHO05D000013 1.7e-13 81.3 39 92.3
CANSAT01G2923 Cannabis sativa HOM05D000017 ORTHO05D000013 6.3e-13 79.3 88 43.2
CANSAT11G0597 Cannabis sativa HOM05D000017 ORTHO05D000013 1.1e-12 78.6 82 45.1
CANSAT78G2408 Cannabis sativa HOM05D000017 ORTHO05D000013 1.1e-12 78.6 336 27.1
CANSAT01G0384 Cannabis sativa HOM05D000017 ORTHO05D000013 2.7e-11 73.9 49 63.3
CANSAT78G0241 Cannabis sativa HOM05D000017 ORTHO05D000013 2.2e-10 70.9 64 53.1
ClCG01G015130 Citrullus lanatus HOM05D000017 ORTHO05D000013 2.2e-10 70.9 359 23.4
Atru.chr1.3834 Acer truncatum HOM05D000017 ORTHO05D000013 2.5e-09 67.4 69 40.6
CANSAT64G0409 Cannabis sativa HOM05D000017 ORTHO05D000013 3.2e-09 67.0 84 36.9
CANSAT54G1361 Cannabis sativa HOM05D000017 ORTHO05D000013 7.2e-09 65.9 86 34.9
Atru.chr3.2988 Acer truncatum HOM05D000017 ORTHO05D000013 9.4e-09 65.5 84 38.1
Atru.chr7.592 Acer truncatum HOM05D000017 ORTHO05D000013 2.1e-08 64.3 64 42.2
Atru.chr3.4260 Acer truncatum HOM05D000017 ORTHO05D000013 4.7e-08 63.2 72 40.3
CANSAT80G2064 Cannabis sativa HOM05D000017 ORTHO05D000013 4.7e-08 63.2 43 58.1
Ciclev10031984m.g Citrus clementina HOM05D042200 ORTHO05D013913 8.0e-08 62.4 349 23.5
Oeu035486.1 Olea europaea HOM05D000017 ORTHO05D000013 1.0e-07 62.0 65 40.0
Oeu042395.1 Olea europaea HOM05D000017 ORTHO05D000013 1.0e-07 62.0 65 40.0
TAR423G0001 Trochodendron aralioides HOM05D000017 ORTHO05D000013 1.0e-07 62.0 382 22.3
CANSAT25G3326 Cannabis sativa HOM05D000017 ORTHO05D002765 1.4e-07 61.6 105 32.4
CANSAT56G3775 Cannabis sativa HOM05D000017 ORTHO05D002765 1.4e-07 61.6 94 36.2
CANSAT80G1918 Cannabis sativa HOM05D000017 ORTHO05D000013 1.4e-07 61.6 68 41.2
CANSAT80G2419 Cannabis sativa HOM05D000017 ORTHO05D000013 1.4e-07 61.6 48 54.2
CsaV3_6G041240 Cucumis sativus L. HOM05D000017 ORTHO05D000013 1.4e-07 61.6 358 21.2
CANSAT21G0038 Cannabis sativa HOM05D008401 ORTHO05D002765 2.3e-07 60.8 74 39.2
Oeu010167.1 Olea europaea HOM05D000017 ORTHO05D000013 2.3e-07 60.8 65 40.0
CANSAT01G1096 Cannabis sativa HOM05D000017 ORTHO05D000013 3.0e-07 60.5 73 39.7
CANSAT54G0413 Cannabis sativa HOM05D008401 ORTHO05D002765 3.0e-07 60.5 73 39.7
CANSAT78G0321 Cannabis sativa HOM05D010396 ORTHO05D002765 3.0e-07 60.5 73 39.7
CANSAT80G0333 Cannabis sativa HOM05D000017 ORTHO05D000013 3.0e-07 60.5 73 39.7
CANSAT80G1576 Cannabis sativa HOM05D000017 ORTHO05D000013 3.0e-07 60.5 73 39.7
CANSAT78G1392 Cannabis sativa HOM05D000017 ORTHO05D000013 4.0e-07 60.1 68 39.7
Oeu041330.1 Olea europaea HOM05D000017 ORTHO05D000013 4.0e-07 60.1 69 39.1
TAR279G0001 Trochodendron aralioides HOM05D000017 ORTHO05D000013 4.0e-07 60.1 360 22.5
CANSAT80G2780 Cannabis sativa HOM05D000017 ORTHO05D000013 5.2e-07 59.7 64 37.5
CANSAT11G2629 Cannabis sativa HOM05D000017 ORTHO05D000013 6.8e-07 59.3 65 36.9
Oeu009060.1 Olea europaea HOM05D000017 ORTHO05D000013 6.8e-07 59.3 65 40.0
CANSAT78G2345 Cannabis sativa HOM05D000017 ORTHO05D000013 8.8e-07 58.9 68 39.7
TWI18G0050 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 8.8e-07 58.9 92 28.3
CANSAT21G1475 Cannabis sativa HOM05D000017 ORTHO05D000013 1.2e-06 58.5 64 35.9
CANSAT54G1694 Cannabis sativa HOM05D000017 ORTHO05D000013 1.2e-06 58.5 64 35.9
Sed0022463 Sechium edule HOM05D000017 ORTHO05D000013 1.2e-06 58.5 347 20.5
CANSAT25G0180 Cannabis sativa HOM05D000017 ORTHO05D000013 1.5e-06 58.2 68 39.7
Oeu044754.1 Olea europaea HOM05D000017 ORTHO05D000013 1.5e-06 58.2 74 32.4
CANSAT21G1471 Cannabis sativa HOM05D000017 ORTHO05D000013 2.0e-06 57.8 115 30.4
CANSAT25G1145 Cannabis sativa HOM05D000017 ORTHO05D000013 2.0e-06 57.8 115 30.4
Oeu016698.1 Olea europaea HOM05D000017 ORTHO05D000013 2.0e-06 57.8 69 36.2
TWI63G0423 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.0e-06 57.8 92 28.3
Atru.chr7.529 Acer truncatum HOM05D000017 ORTHO05D000013 2.6e-06 57.4 72 33.3
CANSAT64G1942 Cannabis sativa HOM05D000017 ORTHO05D000013 3.4e-06 57.0 64 37.5
Oeu015457.1 Olea europaea HOM05D000017 ORTHO05D000013 3.4e-06 57.0 65 36.9
CANSAT25G0681 Cannabis sativa HOM05D000017 ORTHO05D000013 4.4e-06 56.6 66 40.9
CANSAT25G1775 Cannabis sativa HOM05D000017 ORTHO05D000013 4.4e-06 56.6 42 57.1
ClCG03G007700 Citrullus lanatus HOM05D000176 ORTHO05D034749 4.4e-06 56.6 69 37.7
ClCG06G006800 Citrullus lanatus HOM05D000176 ORTHO05D000013 4.4e-06 56.6 69 37.7
Oeu019782.1 Olea europaea HOM05D012404 ORTHO05D002765 4.4e-06 56.6 60 40.0
Atru.chr8.255 Acer truncatum HOM05D000017 ORTHO05D000013 5.7e-06 56.2 83 33.7
CANSAT78G1212 Cannabis sativa HOM05D000017 ORTHO05D000013 5.7e-06 56.2 81 33.3
Nitab4.5_0008756g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 5.7e-06 56.2 67 35.8
Nitab4.5_0009017g0010 Nicotiana tabacum HOM05D000017 ORTHO05D002765 5.7e-06 56.2 78 30.8
CANSAT25G1251 Cannabis sativa HOM05D000017 ORTHO05D000013 7.5e-06 55.8 102 30.4
CANSAT56G1010 Cannabis sativa HOM05D000017 ORTHO05D000013 7.5e-06 55.8 99 31.3
CANSAT64G3012 Cannabis sativa HOM05D000017 ORTHO05D000013 7.5e-06 55.8 99 31.3
CANSAT80G2308 Cannabis sativa HOM05D000017 ORTHO05D000013 7.5e-06 55.8 39 64.1
Sopen10g023510 Solanum pennellii HOM05D000017 ORTHO05D000013 7.5e-06 55.8 68 30.9
Atru.chr4.2269 Acer truncatum HOM05D000017 ORTHO05D013913 9.8e-06 55.5 71 38.0
Atru.chr6.1860 Acer truncatum HOM05D000017 ORTHO05D000013 9.8e-06 55.5 76 31.6
ATR0727G001 Amborella trichopoda HOM05D000017 ORTHO05D000013 9.8e-06 55.5 56 41.1
CANSAT21G1876 Cannabis sativa HOM05D000017 ORTHO05D000013 9.8e-06 55.5 56 41.1
CANSAT35G1872 Cannabis sativa HOM05D000017 ORTHO05D000013 9.8e-06 55.5 115 30.4
Nitab4.5_0002944g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 9.8e-06 55.5 68 36.8
Nitab4.5_0007005g0050 Nicotiana tabacum HOM05D007248 ORTHO05D002765 9.8e-06 55.5 78 30.8
Nitab4.5_0008036g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 9.8e-06 55.5 78 30.8


User provided reference genes

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