Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G1971 Cannabis sativa HOM05D007122 ORTHO05D008918 5.0e-157 557.8 287 100.0
Prupe.3G022800 Prunus persica HOM05D007122 ORTHO05D008918 1.1e-116 423.7 287 74.6
MD17G1162500 Malus domestica HOM05D007122 ORTHO05D008918 5.6e-116 421.4 285 75.4
CiPaw.01G090900 Carya illinoinensis HOM05D007122 ORTHO05D008918 8.1e-115 417.5 287 74.2
QL05p084392 Quercus lobata HOM05D007122 ORTHO05D008918 8.1e-115 417.5 286 74.1
TWI59G0863 Tripterygium wilfordii HOM05D007122 ORTHO05D008918 2.6e-113 412.5 286 74.5
FAN14G1589 Fragaria x ananassa HOM05D007122 ORTHO05D008918 9.2e-111 404.1 287 72.5
RcHm_v2.0_Chr2g0149531 Rosa chinensis HOM05D007122 ORTHO05D008918 1.2e-110 403.7 287 72.1
FvH4_6g36990 Fragaria vesca HOM05D007122 ORTHO05D008918 2.1e-110 402.9 287 72.5
COL.COLO4_23084 Corchorus olitorius HOM05D007122 ORTHO05D008918 2.7e-110 402.5 285 73.3
FAN05G3936 Fragaria x ananassa HOM05D007122 ORTHO05D008918 4.6e-110 401.7 287 72.1
Gorai.007G115100 Gossypium raimondii HOM05D007122 ORTHO05D008918 7.8e-110 401.0 286 70.6
Thecc.01G329100 Theobroma cacao HOM05D007122 ORTHO05D008918 2.3e-109 399.4 289 72.3
Gohir.D11G107500 Gossypium hirsutum HOM05D007122 ORTHO05D008918 5.1e-109 398.3 286 71.0
Cpa.g.sc57.60 Carica papaya HOM05D007122 ORTHO05D008918 7.3e-108 394.4 286 71.3
Potri.002G183700 Populus trichocarpa HOM05D007122 ORTHO05D008918 9.5e-108 394.0 288 70.8
Atru.chr5.816 Acer truncatum HOM05D007122 ORTHO05D008918 3.6e-107 392.1 286 70.6
ClCG07G014660 Citrullus lanatus HOM05D007122 ORTHO05D008918 3.1e-106 389.0 286 71.7
TAR629G1569 Trochodendron aralioides HOM05D007122 ORTHO05D008918 1.5e-105 386.7 285 69.8
MELO3C026712.2 Cucumis melo HOM05D007122 ORTHO05D008918 9.9e-105 384.0 285 69.8
CsaV3_3G030490 Cucumis sativus L. HOM05D007122 ORTHO05D008918 2.2e-104 382.9 285 69.8
Carub.0004s2963 Capsella rubella HOM05D007122 ORTHO05D008918 3.5e-102 375.6 253 75.5
Lj3g0016159 Lotus japonicus HOM05D007122 ORTHO05D008918 3.5e-102 375.6 287 69.3
Ciclev10021604m.g Citrus clementina HOM05D007122 ORTHO05D008918 6.0e-102 374.8 286 69.6
GSVIVG01027487001 Vitis vinifera HOM05D007122 ORTHO05D008918 6.0e-102 374.8 285 68.4
CARHR142260 Cardamine hirsuta HOM05D007122 ORTHO05D008918 5.1e-101 371.7 270 70.0
Sp4g28930 Schrenkiella parvula HOM05D007122 ORTHO05D008918 1.5e-100 370.2 270 70.4
AT2G46910 Arabidopsis thaliana HOM05D007122 ORTHO05D008918 5.6e-100 368.2 255 72.5
Aa31LG1G28270 Aethionema arabicum HOM05D007122 ORTHO05D008918 7.3e-100 367.9 273 70.3
Thhalv10001577m.g Eutrema salsugineum HOM05D007122 ORTHO05D008918 7.3e-100 367.9 254 72.8
A05p00930 Brassica napus HOM05D007122 ORTHO05D008918 8.1e-99 364.4 270 69.3
Ca_20970_v3 Cicer arietinum L. HOM05D007122 ORTHO05D008918 1.4e-98 363.6 285 68.1
Phvul.010G164100 Phaseolus vulgaris HOM05D007122 ORTHO05D008918 2.4e-98 362.8 290 69.0
BcaC02g12634 Brassica carinata HOM05D007122 ORTHO05D008918 3.1e-98 362.5 268 69.0
BraA05t19094Z Brassica rapa HOM05D007122 ORTHO05D008918 5.3e-98 361.7 271 69.7
Glyma.07G002100 Glycine max HOM05D007122 ORTHO05D008918 5.3e-98 361.7 230 81.7
THA.LOC104802109 Tarenaya hassleriana HOM05D007122 ORTHO05D008918 3.4e-97 359.0 278 68.7
Hma1.2p1_0074F.1_g038925 Hydrangea macrophylla HOM05D007122 ORTHO05D008918 7.6e-97 357.8 294 67.0
Medtr4g005390 Medicago truncatula HOM05D007122 ORTHO05D008918 7.6e-97 357.8 263 71.9
MBI12_g33188_MAGBIO Magnolia biondii HOM05D007122 ORTHO05D008918 9.9e-97 357.5 289 68.2
PSO782G5442 Papaver somniferum HOM05D007122 ORTHO05D008918 2.9e-96 355.9 247 73.3
Nn1g00501 Nelumbo nucifera HOM05D007122 ORTHO05D008918 4.9e-96 355.1 285 67.0
C04p01080 Brassica napus HOM05D006867 ORTHO05D008676 1.1e-95 354.0 269 68.4
Cc02_g30330 Coffea canephora HOM05D007122 ORTHO05D008918 1.1e-95 354.0 242 73.1
TPR.G38811 Trifolium pratense HOM05D007122 ORTHO05D008918 2.4e-95 352.8 235 77.9
EL10Ac5g10570 Beta vulgaris HOM05D007122 ORTHO05D008918 1.6e-94 350.1 257 69.3
Eucgr.E00013 Eucalyptus grandis HOM05D007122 ORTHO05D008918 1.6e-94 350.1 285 64.2
AUR62028625 Chenopodium quinoa HOM05D007122 ORTHO05D008918 3.5e-94 349.0 256 69.5
Sabra02G0131900 Salix brachista HOM05D007122 ORTHO05D008918 4.6e-94 348.6 377 53.8
AUR62008050 Chenopodium quinoa HOM05D007122 ORTHO05D008918 6.0e-94 348.2 229 75.5
Sopen08g022350 Solanum pennellii HOM05D007122 ORTHO05D008918 1.7e-93 346.7 249 69.5
Solyc08g068590.4 Solanum lycopersicum HOM05D007122 ORTHO05D008918 5.1e-93 345.1 249 69.1
Peaxi162Scf00822g00313 Petunia axillaris HOM05D007122 ORTHO05D008918 1.5e-92 343.6 261 67.0
CAN.G21.48 Capsicum annuum HOM05D007122 ORTHO05D008918 2.5e-92 342.8 247 68.0
Lj9A610T61 Lonicera japonica HOM05D007122 ORTHO05D008918 2.5e-92 342.8 231 77.1
arahy.Tifrunner.gnm1.ann1.XK7RJX Arachis hypogaea HOM05D007122 ORTHO05D008918 4.3e-92 342.0 258 70.2
arahy.Tifrunner.gnm1.ann1.KLKB5C Arachis hypogaea HOM05D007122 ORTHO05D008918 9.6e-92 340.9 249 69.9
Lalb_Chr04g0264851 Lupinus albus HOM05D007122 ORTHO05D008918 1.6e-91 340.1 241 73.4
MSTRG.12208 Avicennia marina HOM05D007122 ORTHO05D008918 8.1e-91 337.8 259 67.6
Manes.01G237100 Manihot esculenta HOM05D007122 ORTHO05D008918 4.0e-90 335.5 249 71.1
Nitab4.5_0006202g0020 Nicotiana tabacum HOM05D007122 ORTHO05D008918 5.3e-90 335.1 247 68.8
HPP92_007409 Vanilla planifolia HOM05D007122 ORTHO05D008918 2.6e-89 332.8 288 61.8
Actinidia33027 Actinidia chinensis HOM05D007122 ORTHO05D008918 2.2e-88 329.7 292 63.0
HanXRQChr16g0524441 Helianthus annuus HOM05D007122 ORTHO05D008918 1.9e-87 326.6 243 68.7
Zm00001eb220590 Zea mays HOM05D007122 ORTHO05D008918 2.4e-87 326.2 241 70.1
PGSC0003DMG400029047 Solanum tuberosum HOM05D007122 ORTHO05D008918 5.4e-87 325.1 279 60.6
Os10g0509200 Oryza sativa ssp. japonica HOM05D007122 ORTHO05D008918 7.1e-87 324.7 291 60.1
Oeu050289.1 Olea europaea HOM05D007122 ORTHO05D008918 1.2e-86 323.9 251 67.7
CDE02G4652 Ceratophyllum demersum HOM05D007122 ORTHO05D008918 5.1e-85 318.5 289 62.3
ECA234G3018 Erigeron canadensis HOM05D007122 ORTHO05D008918 6.7e-85 318.2 226 70.8
Hund02816 Selenicereus undatus HOM05D007122 ORTHO05D008918 1.1e-84 317.4 234 69.7
ATR0579G047 Amborella trichopoda HOM05D007122 ORTHO05D008918 3.3e-84 315.8 227 69.2
Dinv25395 Davidia involucrata HOM05D007122 ORTHO05D008918 4.8e-83 312.0 286 60.8
Rhsim04G0175900 Rhododendron simsii HOM05D007122 ORTHO05D008918 2.4e-82 309.7 305 56.4
unitig_0.g1006 Utricularia gibba HOM05D007122 ORTHO05D003998 1.2e-81 307.4 240 65.0
vmacro08515 Vaccinium macrocarpon HOM05D007122 ORTHO05D008918 5.8e-81 305.1 236 68.6
VMungo0331G0463 Vigna mungo HOM05D000070 ORTHO05D003491 3.8e-80 302.4 253 67.6
Sed0017612 Sechium edule HOM05D007122 ORTHO05D008918 1.6e-78 297.0 197 77.2
PGR042G2951 Punica granatum HOM05D007122 ORTHO05D008918 3.9e-77 292.4 239 63.2
Gohir.A11G103000 Gossypium hirsutum HOM05D007122 ORTHO05D008918 1.5e-76 290.4 188 78.2
Duzib133G0914 Durio zibethinus HOM05D007122 ORTHO05D008918 1.0e-72 277.7 240 62.5
Psat7g265240 Pisum sativum HOM05D007122 ORTHO05D008918 1.7e-72 276.9 198 72.7
Lsat_1_v5_gn_4_31280 Lactuca sativa HOM05D007122 ORTHO05D008918 1.4e-71 273.9 233 64.8
Ah.11g050690 Amaranthus hybridus HOM05D007122 ORTHO05D008918 9.7e-68 261.2 229 61.1
Nitab4.5_0000406g0060 Nicotiana tabacum HOM05D006934 ORTHO05D008743 1.6e-67 260.4 185 67.6
Dinv32665 Davidia involucrata HOM05D007122 ORTHO05D008918 1.0e-64 251.1 193 67.4
SMO232G0083 Selaginella moellendorffii HOM05D007122 ORTHO05D008918 1.3e-64 250.8 247 54.7
SGA_v2.0_scaffold104G30244 Striga asiatica HOM05D007122 ORTHO05D008918 6.5e-64 248.4 250 56.4
Aqoxy5G04392 Aquilegia oxysepala HOM05D007122 ORTHO05D008918 2.5e-63 246.5 224 61.2
Glyma.08G224600 Glycine max HOM05D007122 ORTHO05D008918 6.1e-62 241.9 152 82.9
Mapoly0069s0014 Marchantia polymorpha HOM05D007122 ORTHO05D008918 2.0e-60 236.9 267 49.1
Haze_16258 Corylus avellana HOM05D007122 ORTHO05D008918 3.3e-60 236.1 426 39.0
Sc05g0001590 Simmondsia chinensis HOM05D007122 ORTHO05D008918 1.4e-58 230.7 195 60.0
Pp3c11_15290 Physcomitrium patens HOM05D007122 ORTHO05D008918 1.5e-57 227.3 202 55.0
PSO063G7482 Papaver somniferum HOM05D007122 ORTHO05D008918 7.7e-57 224.9 151 74.8
Glyma.14G134000 Glycine max HOM05D007122 ORTHO05D008918 1.0e-56 224.6 153 75.2
FAN02G0509 Fragaria x ananassa HOM05D007122 ORTHO05D008918 3.9e-53 212.6 206 57.8
Migut.N02127 Erythranthe guttata HOM05D007122 ORTHO05D008918 2.1e-46 190.3 149 65.1
QL05p083819 Quercus lobata HOM05D007122 ORTHO05D008918 2.9e-40 169.9 179 55.3
Pp3c2_10460 Physcomitrium patens HOM05D007122 ORTHO05D008918 4.1e-34 149.4 145 49.7
Zm00001eb094490 Zea mays HOM05D007122 ORTHO05D008918 5.9e-33 145.6 94 75.5
Cre01.g039550 Chlamydomonas reinhardtii HOM05D007122 ORTHO05D008918 6.8e-29 132.1 261 34.1
MCO07G119 Micromonas commoda HOM05D007122 ORTHO05D008918 4.8e-27 125.9 286 33.6
Psat7g265400 Pisum sativum HOM05D007122 ORTHO05D008918 5.9e-25 119.0 93 67.7
FAN09G2218 Fragaria x ananassa HOM05D007122 ORTHO05D008918 7.0e-18 95.5 92 56.5
Hma1.2p1_0074F.1_g038930 Hydrangea macrophylla HOM05D007122 ORTHO05D008918 7.0e-18 95.5 67 70.1
SGA_v2.0_scaffold159G37569 Striga asiatica HOM05D007122 ORTHO05D008918 4.4e-12 76.3 116 41.4
FAN05G3242 Fragaria x ananassa HOM05D007122 ORTHO05D008918 5.8e-12 75.9 40 87.5
FAN14G0283 Fragaria x ananassa HOM05D007122 ORTHO05D008918 5.8e-12 75.9 40 87.5
FvH4_6g35960 Fragaria vesca HOM05D007122 ORTHO05D008918 2.9e-11 73.6 40 85.0
SMO367G0795 Selaginella moellendorffii HOM05D002234 ORTHO05D002254 9.2e-10 68.6 237 26.6
THA.LOC104812983 Tarenaya hassleriana HOM05D002234 ORTHO05D002254 9.2e-10 68.6 249 26.1
TAR119G0001 Trochodendron aralioides HOM05D002234 ORTHO05D002254 5.0e-08 62.8 225 29.8
Lj6g0013923 Lotus japonicus HOM05D002234 ORTHO05D002254 6.6e-08 62.4 249 26.5
PSO210G7268 Papaver somniferum HOM05D002234 ORTHO05D002254 8.6e-08 62.0 230 24.3
PRCOL_00001829 Prasinoderma coloniale HOM05D002234 ORTHO05D002254 3.3e-07 60.1 243 27.6
MSTRG.12171 Avicennia marina HOM05D002234 ORTHO05D002254 4.3e-07 59.7 233 28.8
Lalb_Chr16g0381141 Lupinus albus HOM05D002234 ORTHO05D002254 1.6e-06 57.8 240 28.8
C04p72510 Brassica napus HOM05D000051 ORTHO05D000015 2.1e-06 57.4 95 38.9
BolC4t28739H Brassica oleracea HOM05D000051 ORTHO05D000015 2.1e-06 57.4 95 38.9
MELO3C007423.2 Cucumis melo HOM05D002234 ORTHO05D002254 4.7e-06 56.2 236 26.3
QL05p084699 Quercus lobata HOM05D007122 ORTHO05D008918 4.7e-06 56.2 53 50.9
Cc03_g05780 Coffea canephora HOM05D006432 ORTHO05D008257 6.2e-06 55.8 179 28.5


User provided reference genes

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