Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G1928 Cannabis sativa HOM05D006250 ORTHO05D007107 5.8e-139 498.8 602 100.0
Haze_12133 Corylus avellana HOM05D006250 ORTHO05D007107 2.3e-71 274.2 620 76.0
CiPaw.05G146100 Carya illinoinensis HOM05D006250 ORTHO05D007107 1.7e-69 268.1 624 78.4
Manes.05G091350 Manihot esculenta HOM05D006250 ORTHO05D007107 2.8e-69 267.3 611 77.3
Dinv31115 Davidia involucrata HOM05D006250 ORTHO05D007107 8.2e-69 265.8 620 78.2
COL.COLO4_19523 Corchorus olitorius HOM05D006250 ORTHO05D007107 1.4e-68 265.0 608 76.6
GSVIVG01020179001 Vitis vinifera HOM05D006250 ORTHO05D007107 1.3e-66 258.5 582 79.2
QL03p066863 Quercus lobata HOM05D006250 ORTHO05D007107 1.5e-65 255.0 616 76.3
Hma1.2p1_1049F.1_g251780 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 3.2e-65 253.8 564 81.9
Hma1.2p1_2649F.1_g326135 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 3.2e-65 253.8 564 81.9
Potri.008G193700 Populus trichocarpa HOM05D006250 ORTHO05D007107 1.0e-63 248.8 613 76.2
Eucgr.B03367 Eucalyptus grandis HOM05D006250 ORTHO05D007107 3.0e-63 247.3 621 74.9
Prupe.1G260300 Prunus persica HOM05D006250 ORTHO05D007107 2.0e-62 244.6 247 57.9
FAN22G2376 Fragaria x ananassa HOM05D006250 ORTHO05D007107 3.3e-62 243.8 608 76.0
Thecc.02G242000 Theobroma cacao HOM05D006250 ORTHO05D007107 4.4e-62 243.4 561 80.6
Ciclev10031015m.g Citrus clementina HOM05D006250 ORTHO05D007107 7.5e-62 242.7 609 75.5
Sopen05g002190 Solanum pennellii HOM05D000912 ORTHO05D001232 3.7e-61 240.4 617 75.4
arahy.Tifrunner.gnm1.ann1.11GRU6 Arachis hypogaea HOM05D006250 ORTHO05D007107 6.3e-61 239.6 613 72.8
arahy.Tifrunner.gnm1.ann1.ST0DQ2 Arachis hypogaea HOM05D006250 ORTHO05D007107 6.3e-61 239.6 613 72.6
MD16G1085800 Malus domestica HOM05D006250 ORTHO05D007107 6.3e-61 239.6 236 59.3
RcHm_v2.0_Chr4g0444691 Rosa chinensis HOM05D006250 ORTHO05D007107 1.4e-60 238.4 229 60.7
Solyc05g006170.4 Solanum lycopersicum HOM05D006250 ORTHO05D007107 1.4e-60 238.4 617 75.2
PGSC0003DMG400015603 Solanum tuberosum HOM05D006250 ORTHO05D007107 2.4e-60 237.7 616 74.8
Cc11_g14200 Coffea canephora HOM05D006250 ORTHO05D007107 4.1e-60 236.9 561 79.0
Migut.L01451 Erythranthe guttata HOM05D006250 ORTHO05D007107 5.3e-60 236.5 622 74.3
TAR629G0559 Trochodendron aralioides HOM05D006250 ORTHO05D007107 1.2e-59 235.3 244 56.6
CAN.G1160.10 Capsicum annuum HOM05D006250 ORTHO05D007107 2.0e-59 234.6 573 78.2
TWI18G0037 Tripterygium wilfordii HOM05D006250 ORTHO05D007107 3.5e-59 233.8 584 77.7
Glyma.02G029800 Glycine max HOM05D006250 ORTHO05D007107 4.5e-59 233.4 610 76.7
FvH4_4g35070 Fragaria vesca HOM05D006250 ORTHO05D007107 1.1e-57 228.8 234 58.1
FAN12G0989 Fragaria x ananassa HOM05D006250 ORTHO05D007107 1.1e-57 228.8 234 58.1
Gorai.009G344900 Gossypium raimondii HOM05D006250 ORTHO05D007107 1.5e-57 228.4 604 75.8
Gohir.D05G321400 Gossypium hirsutum HOM05D006250 ORTHO05D007107 3.2e-57 227.3 604 75.8
Sabra08G0147200 Salix brachista HOM05D006250 ORTHO05D007107 3.2e-57 227.3 651 61.6
FAN17G0914 Fragaria x ananassa HOM05D006250 ORTHO05D007107 4.2e-57 226.9 619 74.0
VMungo1215G1343 Vigna mungo HOM05D006250 ORTHO05D007107 4.2e-57 226.9 561 81.1
Aa31LG2G10230 Aethionema arabicum HOM05D006250 ORTHO05D007107 2.1e-56 224.6 573 58.1
Lsat_1_v5_gn_3_49600 Lactuca sativa HOM05D006250 ORTHO05D007107 6.1e-56 223.0 610 75.7
Lalb_Chr09g0326521 Lupinus albus HOM05D006250 ORTHO05D007107 1.4e-55 221.9 604 72.0
Glyma.01G036200 Glycine max HOM05D006250 ORTHO05D007107 1.8e-55 221.5 552 78.8
MD13G1086400 Malus domestica HOM05D006250 ORTHO05D007107 3.0e-55 220.7 610 74.9
TPR.G13515 Trifolium pratense HOM05D006250 ORTHO05D007107 1.2e-54 218.8 571 77.1
VMungo0720G1586 Vigna mungo HOM05D006250 ORTHO05D007107 1.2e-54 218.8 566 79.9
Phvul.002G075400 Phaseolus vulgaris HOM05D006250 ORTHO05D007107 2.0e-54 218.0 196 64.3
CDE04G2141 Ceratophyllum demersum HOM05D006250 ORTHO05D007107 7.5e-54 216.1 566 79.2
Gohir.A05G319200 Gossypium hirsutum HOM05D006250 ORTHO05D007107 9.8e-54 215.7 229 56.3
Medtr5g035590 Medicago truncatula HOM05D006250 ORTHO05D007107 1.3e-53 215.3 176 65.3
Atru.chr11.1955 Acer truncatum HOM05D006250 ORTHO05D007107 1.7e-53 214.9 231 56.3
Duzib251G0023 Durio zibethinus HOM05D006250 ORTHO05D007107 1.7e-53 214.9 587 75.5
BcaC05g24872 Brassica carinata HOM05D006250 ORTHO05D007107 2.8e-53 214.2 231 55.0
MSTRG.625 Avicennia marina HOM05D006250 ORTHO05D007107 3.7e-53 213.8 620 71.5
Sp1g09140 Schrenkiella parvula HOM05D006250 ORTHO05D007107 3.7e-53 213.8 238 53.8
THA.LOC104816735 Tarenaya hassleriana HOM05D006250 ORTHO05D007107 4.8e-53 213.4 539 82.6
C05p08800 Brassica napus HOM05D006250 ORTHO05D007107 8.3e-53 212.6 229 55.0
BolC5t29626H Brassica oleracea HOM05D006250 ORTHO05D007107 8.3e-53 212.6 229 55.0
CARHR010650 Cardamine hirsuta HOM05D006250 ORTHO05D007107 1.4e-52 211.8 186 61.3
FAN07G1033 Fragaria x ananassa HOM05D006250 ORTHO05D007107 1.8e-52 211.5 253 53.4
AL1G21310 Arabidopsis lyrata HOM05D006250 ORTHO05D007107 3.1e-52 210.7 240 51.2
Aqoxy3G03090 Aquilegia oxysepala HOM05D006250 ORTHO05D007107 4.1e-52 210.3 619 72.2
A06p07280 Brassica napus HOM05D006250 ORTHO05D007107 4.1e-52 210.3 225 55.1
BraA06t23934Z Brassica rapa HOM05D006250 ORTHO05D007107 4.1e-52 210.3 225 55.1
BraA08t35306Z Brassica rapa HOM05D006250 ORTHO05D007107 4.1e-52 210.3 611 75.1
Carub.0001s0994 Capsella rubella HOM05D006250 ORTHO05D007107 4.1e-52 210.3 234 53.4
HanXRQChr10g0288221 Helianthus annuus HOM05D006250 ORTHO05D007107 4.1e-52 210.3 197 56.3
Thhalv10007114m.g Eutrema salsugineum HOM05D006250 ORTHO05D007107 9.1e-52 209.1 238 52.9
BcaC05g24932 Brassica carinata HOM05D006250 ORTHO05D007107 1.2e-51 208.8 166 66.3
Psat4g140960 Pisum sativum HOM05D006250 ORTHO05D007107 1.2e-51 208.8 195 60.5
BolC8t49010H Brassica oleracea HOM05D006250 ORTHO05D007107 1.6e-51 208.4 603 75.3
AT1G10510 Arabidopsis thaliana HOM05D006250 ORTHO05D007107 3.5e-51 207.2 235 52.3
AUR62039411 Chenopodium quinoa HOM05D006250 ORTHO05D007107 4.5e-51 206.8 224 56.2
SalBow2G3220 Salvia bowleyana HOM05D006250 ORTHO05D007107 5.9e-51 206.5 536 80.0
A08p33910 Brassica napus HOM05D006250 ORTHO05D007107 1.3e-50 205.3 237 54.0
BcaC07g38569 Brassica carinata HOM05D006250 ORTHO05D007107 1.7e-50 204.9 608 74.2
AUR62026573 Chenopodium quinoa HOM05D006250 ORTHO05D007107 1.7e-50 204.9 224 55.8
MBI18_g16987_MAGBIO Magnolia biondii HOM05D006250 ORTHO05D007107 1.7e-50 204.9 598 75.3
C08p13750 Brassica napus HOM05D006250 ORTHO05D007107 2.9e-50 204.1 188 60.1
Ca_18091_v3 Cicer arietinum L. HOM05D006250 ORTHO05D007107 1.9e-49 201.4 231 55.0
Nn3g16985 Nelumbo nucifera HOM05D006250 ORTHO05D007107 1.9e-49 201.4 558 68.3
CSS0049978 Camellia sinensis var. sinensis HOM05D006250 ORTHO05D007107 3.2e-49 200.7 621 73.9
Lj6A800T42 Lonicera japonica HOM05D006250 ORTHO05D007107 5.5e-49 199.9 633 72.5
BcaC07g38607 Brassica carinata HOM05D006250 ORTHO05D007107 9.5e-49 199.1 194 58.2
Lj2g0015976 Lotus japonicus HOM05D006250 ORTHO05D007107 1.6e-48 198.4 189 61.9
EL10Ac6g13760 Beta vulgaris HOM05D006250 ORTHO05D007107 2.1e-48 198.0 227 53.3
DCAR_026556 Daucus carota HOM05D006250 ORTHO05D007107 3.6e-48 197.2 176 60.2
ClCG09G022110 Citrullus lanatus HOM05D006250 ORTHO05D007107 4.7e-48 196.8 265 49.4
TAR371G0500 Trochodendron aralioides HOM05D006250 ORTHO05D007107 1.4e-47 195.3 621 61.4
unitig_749.g13267 Utricularia gibba HOM05D006250 ORTHO05D007107 3.4e-46 190.7 187 58.8
MELO3C002989.2 Cucumis melo HOM05D006250 ORTHO05D007107 4.4e-46 190.3 216 53.7
ECA246G3811 Erigeron canadensis HOM05D006250 ORTHO05D007107 5.7e-46 189.9 182 54.9
PSO063G2741 Papaver somniferum HOM05D006250 ORTHO05D007107 5.7e-46 189.9 628 71.2
PSO832G4030 Papaver somniferum HOM05D006250 ORTHO05D007107 7.5e-46 189.5 628 71.0
Hund05952 Selenicereus undatus HOM05D006250 ORTHO05D007107 4.1e-44 183.7 216 49.5
Ah.03g132320 Amaranthus hybridus HOM05D006250 ORTHO05D007107 5.4e-44 183.3 216 50.9
Sed0020226 Sechium edule HOM05D006250 ORTHO05D007107 2.0e-43 181.4 221 52.9
Nitab4.5_0005722g0060 Nicotiana tabacum HOM05D006250 ORTHO05D007107 5.9e-43 179.9 185 56.8
CsaV3_5G025030 Cucumis sativus L. HOM05D006250 ORTHO05D007107 7.8e-43 179.5 216 51.9
Actinidia15003 Actinidia chinensis HOM05D006250 ORTHO05D007107 1.0e-42 179.1 610 70.3
SGA_v2.0_scaffold8G04258 Striga asiatica HOM05D006250 ORTHO05D007107 3.8e-42 177.2 610 71.8
Sc11g0001380 Simmondsia chinensis HOM05D006250 ORTHO05D007107 7.3e-41 172.9 206 53.4
Dinv24907 Davidia involucrata HOM05D006250 ORTHO05D007107 4.7e-40 170.2 471 88.1
Hma1.2p1_1049F.1_g251790 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 2.0e-38 164.9 137 65.7
Hma1.2p1_2649F.1_g326133 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 2.0e-38 164.9 137 65.7
ATR0829G105 Amborella trichopoda HOM05D006250 ORTHO05D007107 2.2e-37 161.4 501 80.8
PGR102G1255 Punica granatum HOM05D006250 ORTHO05D007107 4.9e-37 160.2 115 69.6
Lsat_1_v5_gn_4_95161 Lactuca sativa HOM05D006250 ORTHO05D007107 1.8e-36 158.3 124 62.9
Os06g0237502 Oryza sativa ssp. japonica HOM05D006250 ORTHO05D007107 6.6e-34 149.8 553 71.1
Rhsim12G0124700 Rhododendron simsii HOM05D006250 ORTHO05D007107 8.6e-34 149.4 203 47.3
vmacro16283 Vaccinium macrocarpon HOM05D006250 ORTHO05D007107 1.5e-33 148.7 121 60.3
Zm00001eb371900 Zea mays HOM05D006250 ORTHO05D007107 1.2e-30 139.0 162 46.9
Peaxi162Scf00421g00828 Petunia axillaris HOM05D006250 ORTHO05D007107 4.1e-28 130.6 125 58.4
Nitab4.5_0000257g0160 Nicotiana tabacum HOM05D006250 ORTHO05D007107 1.1e-23 115.9 191 42.4
HPP92_017346 Vanilla planifolia HOM05D006250 ORTHO05D007107 3.1e-23 114.4 207 40.6
vmacro16284 Vaccinium macrocarpon HOM05D006250 ORTHO05D007107 2.7e-19 101.3 194 40.2
SEGI_23986 Sequoiadendron giganteum HOM05D006250 ORTHO05D007107 1.2e-14 85.9 210 32.4
AagrBONN_evm.TU.Sc2ySwM_344.3920 Anthoceros agrestis HOM05D006250 ORTHO05D007107 3.4e-14 84.3 181 37.6
TAR629G0016 Trochodendron aralioides HOM05D006250 ORTHO05D007107 2.9e-13 81.3 54 72.2
Lsat_1_v5_gn_4_84060 Lactuca sativa HOM05D006250 ORTHO05D007107 6.4e-13 80.1 64 60.9
Hma1.2p1_2649F.1_g326137 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 8.4e-13 79.7 80 78.8
DCAR_026558 Daucus carota HOM05D006250 ORTHO05D007107 1.9e-12 78.6 210 31.4
Mapoly0090s0039 Marchantia polymorpha HOM05D006250 ORTHO05D007107 7.3e-09 66.6 146 32.9
SMO116G0024 Selaginella moellendorffii HOM05D006250 ORTHO05D007107 1.1e-07 62.8 62 46.8
RcHm_v2.0_Chr6g0258861 Rosa chinensis HOM05D046827 ORTHO05D007107 3.1e-07 61.2 51 62.7
Pp3c14_24560 Physcomitrium patens HOM05D006250 ORTHO05D007107 2.0e-06 58.5 171 29.8
Pp3c14_24566 Physcomitrium patens HOM05D006250 ORTHO05D007107 2.0e-06 58.5 171 29.8
RcHm_v2.0_Chr5g0079721 Rosa chinensis HOM05D046827 ORTHO05D007107 5.8e-06 57.0 43 67.4


User provided reference genes

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