Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G1818 Cannabis sativa HOM05D006231 ORTHO05D007857 1.7e-161 572.8 322 100.0
CiPaw.05G148900 Carya illinoinensis HOM05D006231 ORTHO05D007857 1.1e-99 367.5 316 65.5
QL03p062170 Quercus lobata HOM05D006231 ORTHO05D007857 1.8e-99 366.7 321 68.8
Cfa009127 Carpinus fangiana HOM05D006231 ORTHO05D007857 1.2e-95 354.0 316 60.8
CSS0044234 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 1.5e-93 347.1 305 63.9
CSS0002380 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 1.7e-92 343.6 305 63.0
THA.LOC104822056 Tarenaya hassleriana HOM05D006231 ORTHO05D007857 4.8e-92 342.0 317 61.8
MD16G1088300 Malus domestica HOM05D006231 ORTHO05D007857 8.2e-92 341.3 336 60.7
TWI36G0577 Tripterygium wilfordii HOM05D006231 ORTHO05D007857 1.2e-90 337.4 303 60.7
Prupe.1G258300 Prunus persica HOM05D006231 ORTHO05D007857 4.5e-90 335.5 349 64.2
Dinv24894 Davidia involucrata HOM05D006231 ORTHO05D007857 7.7e-90 334.7 308 61.0
ClCG05G025120 Citrullus lanatus HOM05D006231 ORTHO05D007857 3.2e-88 329.3 313 56.5
AL1G37790 Arabidopsis lyrata HOM05D006231 ORTHO05D007857 4.2e-88 328.9 308 57.1
TAR629G0133 Trochodendron aralioides HOM05D006231 ORTHO05D007857 5.5e-88 328.6 306 62.4
Ciclev10032202m.g Citrus clementina HOM05D006231 ORTHO05D007857 1.6e-87 327.0 313 57.5
MD13G1088000 Malus domestica HOM05D006231 ORTHO05D007857 2.1e-87 326.6 350 62.0
Carub.0001s2346 Capsella rubella HOM05D006231 ORTHO05D007857 2.7e-87 326.2 316 54.7
Thecc.02G247800 Theobroma cacao HOM05D006231 ORTHO05D007857 3.6e-87 325.9 314 61.1
Aa31LG7G7830 Aethionema arabicum HOM05D006231 ORTHO05D007857 4.7e-87 325.5 320 57.8
COL.COLO4_19536 Corchorus olitorius HOM05D006231 ORTHO05D007857 4.7e-87 325.5 313 58.5
RcHm_v2.0_Chr4g0444351 Rosa chinensis HOM05D006231 ORTHO05D007857 1.0e-86 324.3 339 59.6
Atru.chr11.1975 Acer truncatum HOM05D006231 ORTHO05D007857 1.4e-86 323.9 320 62.2
CARHR024340 Cardamine hirsuta HOM05D006231 ORTHO05D007857 1.8e-86 323.6 323 55.4
Nn4g22867 Nelumbo nucifera HOM05D006231 ORTHO05D007857 3.0e-86 322.8 329 58.1
THA.LOC104822957 Tarenaya hassleriana HOM05D006231 ORTHO05D007857 8.8e-86 321.2 290 59.0
FvH4_4g34910 Fragaria vesca HOM05D006231 ORTHO05D007857 1.2e-85 320.9 338 56.8
Eucgr.B02548 Eucalyptus grandis HOM05D006231 ORTHO05D007857 2.0e-85 320.1 236 67.8
Cc11_g14350 Coffea canephora HOM05D006231 ORTHO05D007857 2.6e-85 319.7 315 54.0
Gohir.D05G320900 Gossypium hirsutum HOM05D006231 ORTHO05D007857 5.7e-85 318.5 235 71.5
Gorai.009G344200 Gossypium raimondii HOM05D006231 ORTHO05D007857 7.5e-85 318.2 235 71.1
Manes.01G197500 Manihot esculenta HOM05D006231 ORTHO05D007857 7.5e-85 318.2 322 61.2
AT1G24040 Arabidopsis thaliana HOM05D006231 ORTHO05D007857 1.7e-84 317.0 304 56.6
Oeu046714.1 Olea europaea HOM05D006231 ORTHO05D007857 1.7e-84 317.0 331 53.5
C05p23180 Brassica napus HOM05D006231 ORTHO05D007857 2.2e-84 316.6 225 70.2
Haze_12158 Corylus avellana HOM05D006231 ORTHO05D007857 3.7e-84 315.8 231 70.6
Gohir.D02G165000 Gossypium hirsutum HOM05D006231 ORTHO05D007857 4.8e-84 315.5 224 72.8
BcaC05g26301 Brassica carinata HOM05D006231 ORTHO05D007857 6.3e-84 315.1 228 69.3
BolC5t31019H Brassica oleracea HOM05D006231 ORTHO05D007857 6.3e-84 315.1 228 69.3
MELO3C012017.2 Cucumis melo HOM05D006231 ORTHO05D007857 1.1e-83 314.3 313 55.3
BcaB07g32378 Brassica carinata HOM05D006231 ORTHO05D007857 1.4e-83 313.9 226 69.0
Thhalv10008192m.g Eutrema salsugineum HOM05D006231 ORTHO05D007857 2.4e-83 313.2 269 61.7
arahy.Tifrunner.gnm1.ann1.FQS9XH Arachis hypogaea HOM05D006231 ORTHO05D007857 4.1e-83 312.4 313 58.1
Sp1g21370 Schrenkiella parvula HOM05D006231 ORTHO05D007857 5.4e-83 312.0 279 58.1
CsaV3_5G031780 Cucumis sativus L. HOM05D006231 ORTHO05D007857 7.0e-83 311.6 313 55.3
PGSC0003DMG400004132 Solanum tuberosum HOM05D006231 ORTHO05D007857 7.0e-83 311.6 310 59.7
arahy.Tifrunner.gnm1.ann1.XK2UET Arachis hypogaea HOM05D006231 ORTHO05D007857 9.1e-83 311.2 313 57.2
vmacro16274 Vaccinium macrocarpon HOM05D006231 ORTHO05D007857 1.2e-82 310.8 292 61.6
Nitab4.5_0004963g0030 Nicotiana tabacum HOM05D006231 ORTHO05D007857 2.7e-82 309.7 312 55.1
Duzib248G0169 Durio zibethinus HOM05D006231 ORTHO05D007857 3.5e-82 309.3 223 71.3
Gohir.A05G318600 Gossypium hirsutum HOM05D006231 ORTHO05D007857 5.9e-82 308.5 235 70.2
Sed0009573 Sechium edule HOM05D006231 ORTHO05D007857 5.9e-82 308.5 292 57.2
FAN12G2615 Fragaria x ananassa HOM05D006231 ORTHO05D007857 1.0e-81 307.8 325 56.6
PGR119G0912 Punica granatum HOM05D006231 ORTHO05D007857 2.9e-81 306.2 234 66.2
Hma1.2p1_1017F.1_g248270 Hydrangea macrophylla HOM05D006231 ORTHO05D007857 5.0e-81 305.4 328 56.1
Sopen05g001920 Solanum pennellii HOM05D006231 ORTHO05D007857 5.0e-81 305.4 309 57.9
Potri.008G146000 Populus trichocarpa HOM05D006231 ORTHO05D007857 6.5e-81 305.1 227 67.0
Nitab4.5_0001474g0130 Nicotiana tabacum HOM05D006231 ORTHO05D007857 1.1e-80 304.3 312 54.5
Aqoxy3G00933 Aquilegia oxysepala HOM05D006231 ORTHO05D007857 2.5e-80 303.1 289 56.4
Actinidia15012 Actinidia chinensis HOM05D006231 ORTHO05D007857 4.2e-80 302.4 282 58.2
CAN.G505.18 Capsicum annuum HOM05D006231 ORTHO05D007857 4.7e-79 298.9 308 54.5
MSTRG.613 Avicennia marina HOM05D006231 ORTHO05D007857 6.1e-79 298.5 219 68.9
Hund25325 Selenicereus undatus HOM05D006231 ORTHO05D007857 1.4e-78 297.4 219 68.5
Lsat_1_v5_gn_8_158260 Lactuca sativa HOM05D006231 ORTHO05D007857 1.8e-78 297.0 302 56.0
Lj2g0015887 Lotus japonicus HOM05D006231 ORTHO05D007857 3.0e-78 296.2 314 57.0
FAN22G0458 Fragaria x ananassa HOM05D006231 ORTHO05D007857 4.0e-78 295.8 348 54.3
FAN07G0090 Fragaria x ananassa HOM05D006231 ORTHO05D007857 5.2e-78 295.4 341 55.4
Lalb_Chr09g0326451 Lupinus albus HOM05D006231 ORTHO05D007857 5.2e-78 295.4 230 63.5
Psat2g109920 Pisum sativum HOM05D006231 ORTHO05D007857 8.8e-78 294.7 317 53.6
Potri.010G095800 Populus trichocarpa HOM05D006231 ORTHO05D007857 1.2e-77 294.3 226 65.9
Sc11g0001330 Simmondsia chinensis HOM05D006231 ORTHO05D007857 1.5e-77 293.9 317 53.9
FAN17G2958 Fragaria x ananassa HOM05D006231 ORTHO05D007857 2.0e-77 293.5 341 54.8
A09p40810 Brassica napus HOM05D006231 ORTHO05D007857 2.6e-77 293.1 208 68.8
BraA09t39576Z Brassica rapa HOM05D006231 ORTHO05D007857 2.6e-77 293.1 208 68.8
Peaxi162Scf00421g00419 Petunia axillaris HOM05D006231 ORTHO05D007857 7.5e-77 291.6 308 54.9
AUR62005324 Chenopodium quinoa HOM05D006231 ORTHO05D007857 9.8e-77 291.2 220 66.8
Ca_04621_v3 Cicer arietinum L. HOM05D006231 ORTHO05D007857 1.3e-76 290.8 223 64.1
Ah.03g132450 Amaranthus hybridus HOM05D006231 ORTHO05D007857 2.8e-76 289.7 215 66.0
EL10Ac6g13629 Beta vulgaris HOM05D006231 ORTHO05D007857 3.7e-76 289.3 225 65.8
PSO478G5064 Papaver somniferum HOM05D006231 ORTHO05D007857 6.3e-76 288.5 322 52.2
SalBow2G0481 Salvia bowleyana HOM05D006231 ORTHO05D007857 3.1e-75 286.2 233 62.2
AUR62013974 Chenopodium quinoa HOM05D006231 ORTHO05D007857 1.2e-74 284.3 221 65.2
ECA233G1652 Erigeron canadensis HOM05D006231 ORTHO05D007857 1.6e-74 283.9 313 54.0
HanXRQChr08g0208971 Helianthus annuus HOM05D006231 ORTHO05D007857 1.7e-73 280.4 230 64.8
CSS0037524 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 8.6e-73 278.1 234 61.5
Migut.L01438 Erythranthe guttata HOM05D006231 ORTHO05D007857 1.9e-72 276.9 218 63.8
PSO017G5161 Papaver somniferum HOM05D006231 ORTHO05D007857 2.5e-72 276.6 224 62.9
Glyma.01G034200 Glycine max HOM05D006231 ORTHO05D007857 9.5e-72 274.6 229 61.1
Medtr5g035060 Medicago truncatula HOM05D006231 ORTHO05D007857 1.2e-71 274.2 314 50.0
unitig_22.g6476 Utricularia gibba HOM05D006231 ORTHO05D007857 1.2e-71 274.2 228 60.5
Glyma.02G032100 Glycine max HOM05D006231 ORTHO05D007857 1.8e-70 270.4 241 64.3
TPR.G4354 Trifolium pratense HOM05D006231 ORTHO05D007857 2.3e-70 270.0 231 64.1
Sabra10G0068400 Salix brachista HOM05D006231 ORTHO05D007857 2.6e-69 266.5 331 46.2
Lj3A1049T58 Lonicera japonica HOM05D006231 ORTHO05D007857 5.7e-69 265.4 260 56.9
Rhsim12G0123300 Rhododendron simsii HOM05D000030 ORTHO05D000009 4.9e-68 262.3 280 53.9
Sabra08G0111000 Salix brachista HOM05D006231 ORTHO05D007857 2.7e-66 256.5 191 67.5
Phvul.002G073400 Phaseolus vulgaris HOM05D006231 ORTHO05D007857 7.8e-66 255.0 344 47.7
VMungo1215G3085 Vigna mungo HOM05D006231 ORTHO05D007857 7.8e-66 255.0 329 48.3
CDE10G0954 Ceratophyllum demersum HOM05D006231 ORTHO05D007857 1.5e-64 250.8 215 59.1
DCAR_024529 Daucus carota HOM05D006231 ORTHO05D007857 1.5e-64 250.8 201 63.7
Gorai.005G184900 Gossypium raimondii HOM05D006231 ORTHO05D007857 1.2e-63 247.7 224 62.5
SGA_v2.0_scaffold166G38349 Striga asiatica HOM05D006231 ORTHO05D007857 1.5e-61 240.7 266 50.4
MBI15_g12952_MAGBIO Magnolia biondii HOM05D006231 ORTHO05D007857 5.8e-61 238.8 218 56.0
CDE10G0637 Ceratophyllum demersum HOM05D006231 ORTHO05D007857 9.5e-56 221.5 184 62.0
ATR1149G099 Amborella trichopoda HOM05D006231 ORTHO05D007857 5.2e-54 215.7 184 60.9
Medtr5g035040 Medicago truncatula HOM05D006231 ORTHO05D007857 6.8e-54 215.3 227 51.5
GSVIVG01020181001 Vitis vinifera HOM05D006231 ORTHO05D007857 2.6e-53 213.4 139 75.5
SEGI_07841 Sequoiadendron giganteum HOM05D006231 ORTHO05D007857 5.8e-53 212.2 231 50.2
HPP92_010904 Vanilla planifolia HOM05D006231 ORTHO05D007857 1.3e-52 211.1 217 52.5
Os04g0465500 Oryza sativa ssp. japonica HOM05D006231 ORTHO05D007857 1.3e-49 201.1 244 51.6
Zm00001eb424460 Zea mays HOM05D006231 ORTHO05D007857 4.3e-48 196.1 242 47.5
Solyc05g005890.2 Solanum lycopersicum HOM05D006231 ORTHO05D007857 5.6e-48 195.7 138 71.7
Gohir.A03G141850 Gossypium hirsutum HOM05D006231 ORTHO05D007857 4.7e-47 192.6 240 52.9
SEGI_36756 Sequoiadendron giganteum HOM05D006231 ORTHO05D007857 7.1e-43 178.7 217 45.6
Zm00001eb348680 Zea mays HOM05D006231 ORTHO05D007857 9.6e-40 168.3 239 43.1
Psat2g109880 Pisum sativum HOM05D006231 ORTHO05D007857 2.1e-39 167.2 146 58.2
Pp3c2_6130 Physcomitrium patens HOM05D006231 ORTHO05D007857 8.1e-39 165.2 216 44.4
Pp3c2_6132 Physcomitrium patens HOM05D006231 ORTHO05D007857 8.1e-39 165.2 216 44.4
Mapoly0005s0071 Marchantia polymorpha HOM05D006231 ORTHO05D007857 1.4e-38 164.5 213 44.1
SMO365G0079 Selaginella moellendorffii HOM05D006231 ORTHO05D007857 2.0e-29 134.0 201 38.3
Medtr5g035050 Medicago truncatula HOM05D006231 ORTHO05D007857 3.2e-27 126.7 79 75.9
CBR_g40430 Chara braunii HOM05D017800 ORTHO05D019665 3.3e-24 116.7 211 35.5
Dinv31098 Davidia involucrata HOM05D006231 ORTHO05D007857 1.5e-21 107.8 96 60.4
AagrBONN_evm.TU.Sc2ySwM_368.2752 Anthoceros agrestis HOM05D006231 ORTHO05D007857 2.6e-21 107.1 183 38.8
TAR622G0489 Trochodendron aralioides HOM05D006231 ORTHO05D007857 1.0e-12 78.6 81 55.6
Cre10.g464750 Chlamydomonas reinhardtii HOM05D006231 ORTHO05D007857 9.6e-08 62.0 242 22.7
PRCOL_00005055 Prasinoderma coloniale HOM05D006231 ORTHO05D007857 5.3e-06 56.2 144 26.4


User provided reference genes

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