Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G1787 Cannabis sativa HOM05D007630 ORTHO05D009637 1.1e-136 490.0 247 100.0
QL02p103828 Quercus lobata HOM05D007630 ORTHO05D009637 1.3e-113 413.3 238 88.2
RcHm_v2.0_Chr7g0218271 Rosa chinensis HOM05D007630 ORTHO05D009637 2.9e-113 412.1 233 88.8
Lj4g0008184 Lotus japonicus HOM05D007630 ORTHO05D009637 5.5e-112 407.9 239 84.9
Ciclev10002337m.g Citrus clementina HOM05D007630 ORTHO05D009637 1.6e-111 406.4 235 87.2
FvH4_5g27180 Fragaria vesca HOM05D007630 ORTHO05D009637 2.7e-111 405.6 233 87.6
Hma1.2p1_0157F.1_g069300 Hydrangea macrophylla HOM05D007630 ORTHO05D009637 2.7e-111 405.6 236 86.0
Potri.004G231000 Populus trichocarpa HOM05D007630 ORTHO05D009637 4.7e-111 404.8 238 85.7
Sabra01G0176100 Salix brachista HOM05D007630 ORTHO05D009637 7.9e-111 404.1 238 85.3
CSS0024546 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 5.1e-110 401.4 242 82.2
Prupe.1G587600 Prunus persica HOM05D007630 ORTHO05D009637 8.8e-110 400.6 235 86.4
GSVIVG01023115001 Vitis vinifera HOM05D007630 ORTHO05D009637 1.1e-109 400.2 235 85.1
FAN04G2951 Fragaria x ananassa HOM05D007630 ORTHO05D009637 1.5e-109 399.8 233 86.3
Phvul.003G090300 Phaseolus vulgaris HOM05D007630 ORTHO05D009637 2.6e-109 399.1 236 84.3
TPR.G5932 Trifolium pratense HOM05D007630 ORTHO05D009637 2.6e-109 399.1 235 84.3
Actinidia17707 Actinidia chinensis HOM05D007630 ORTHO05D009637 3.3e-109 398.7 236 84.3
FAN18G2712 Fragaria x ananassa HOM05D007630 ORTHO05D009637 3.3e-109 398.7 240 85.0
Glyma.17G003000 Glycine max HOM05D007630 ORTHO05D009637 3.3e-109 398.7 242 83.9
Nn5g27111 Nelumbo nucifera HOM05D007630 ORTHO05D009637 7.4e-109 397.5 241 83.0
Psat4g001800 Pisum sativum HOM05D007630 ORTHO05D009637 7.4e-109 397.5 238 85.3
Glyma.07G270900 Glycine max HOM05D007630 ORTHO05D009637 1.3e-108 396.7 242 81.8
TWI59G0438 Tripterygium wilfordii HOM05D007630 ORTHO05D009637 1.7e-108 396.4 232 86.2
Rhsim11G0114600 Rhododendron simsii HOM05D007630 ORTHO05D009637 2.8e-108 395.6 243 84.0
Haze_09954 Corylus avellana HOM05D007630 ORTHO05D009637 3.7e-108 395.2 225 89.3
Peaxi162Scf00194g00929 Petunia axillaris HOM05D007630 ORTHO05D009637 4.8e-108 394.8 240 81.2
FAN13G2616 Fragaria x ananassa HOM05D007630 ORTHO05D009637 8.2e-108 394.0 239 84.5
Manes.06G015300 Manihot esculenta HOM05D007630 ORTHO05D009637 8.2e-108 394.0 228 86.0
Medtr4g134400 Medicago truncatula HOM05D007630 ORTHO05D009637 8.2e-108 394.0 238 84.0
Cpa.g.sc246.13 Carica papaya HOM05D007630 ORTHO05D009637 2.4e-107 392.5 238 83.2
Atru.chr6.70 Acer truncatum HOM05D007630 ORTHO05D009637 5.3e-107 391.3 232 86.6
Actinidia11717 Actinidia chinensis HOM05D007630 ORTHO05D009637 7.0e-107 391.0 240 82.1
Aqoxy6G00011 Aquilegia oxysepala HOM05D007630 ORTHO05D009637 1.2e-106 390.2 240 83.3
COL.COLO4_31101 Corchorus olitorius HOM05D007630 ORTHO05D009637 1.5e-106 389.8 235 84.3
vmacro01631 Vaccinium macrocarpon HOM05D007630 ORTHO05D009637 3.5e-106 388.7 235 83.8
Cc02_g23840 Coffea canephora HOM05D007630 ORTHO05D009637 4.5e-106 388.3 232 83.2
Thecc.06G066000 Theobroma cacao HOM05D007630 ORTHO05D009637 7.7e-106 387.5 237 81.4
CSS0032395 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 3.8e-105 385.2 245 79.6
Lj9A243T50 Lonicera japonica HOM05D007630 ORTHO05D009637 3.8e-105 385.2 236 83.1
arahy.Tifrunner.gnm1.ann1.CDQ02R Arachis hypogaea HOM05D007630 ORTHO05D009637 6.5e-105 384.4 248 79.0
arahy.Tifrunner.gnm1.ann1.XQ55VB Arachis hypogaea HOM05D007630 ORTHO05D009637 6.5e-105 384.4 248 79.0
DCAR_001874 Daucus carota HOM05D007630 ORTHO05D009637 6.5e-105 384.4 236 82.2
Nitab4.5_0001085g0080 Nicotiana tabacum HOM05D007630 ORTHO05D009637 8.5e-105 384.0 243 79.8
Nitab4.5_0006947g0030 Nicotiana tabacum HOM05D007630 ORTHO05D009637 1.1e-104 383.6 240 79.6
Lalb_Chr07g0176861 Lupinus albus HOM05D007630 ORTHO05D009637 1.5e-104 383.3 238 81.1
CAN.G1379.16 Capsicum annuum HOM05D007630 ORTHO05D009637 5.5e-104 381.3 232 82.3
ECA236G0298 Erigeron canadensis HOM05D007630 ORTHO05D009637 7.2e-104 380.9 245 81.6
Sopen01g045140 Solanum pennellii HOM05D007630 ORTHO05D009637 1.2e-103 380.2 232 81.5
PGR042G3439 Punica granatum HOM05D007630 ORTHO05D009637 1.6e-103 379.8 232 82.3
Solyc01g102720.3 Solanum lycopersicum HOM05D007630 ORTHO05D009637 2.7e-103 379.0 232 81.0
PGSC0003DMG400018220 Solanum tuberosum HOM05D007630 ORTHO05D009637 2.7e-103 379.0 232 81.0
Duzib192G0579 Durio zibethinus HOM05D007630 ORTHO05D009637 4.7e-103 378.3 229 82.5
Eucgr.G00050 Eucalyptus grandis HOM05D007630 ORTHO05D009637 8.8e-102 374.0 240 80.4
MD08G1250400 Malus domestica HOM05D007630 ORTHO05D009637 1.1e-101 373.6 245 79.6
Hund29384 Selenicereus undatus HOM05D007630 ORTHO05D009637 1.1e-101 373.6 232 80.6
Hund29386 Selenicereus undatus HOM05D007630 ORTHO05D009637 1.1e-101 373.6 232 80.6
AUR62040114 Chenopodium quinoa HOM05D007630 ORTHO05D009637 4.4e-101 371.7 241 79.3
HanXRQChr16g0531021 Helianthus annuus HOM05D007630 ORTHO05D009637 4.4e-101 371.7 242 79.3
Gohir.A05G160300 Gossypium hirsutum HOM05D007630 ORTHO05D009637 2.8e-100 369.0 246 78.0
Gorai.009G168000 Gossypium raimondii HOM05D007630 ORTHO05D009637 2.8e-100 369.0 246 78.0
MSTRG.16453 Avicennia marina HOM05D007630 ORTHO05D009637 4.8e-100 368.2 226 81.0
THA.LOC104809043 Tarenaya hassleriana HOM05D007630 ORTHO05D009637 4.8e-100 368.2 238 77.3
Oeu000167.1 Olea europaea HOM05D007630 ORTHO05D009637 3.1e-99 365.5 221 82.4
Migut.B00699 Erythranthe guttata HOM05D007630 ORTHO05D009637 7.0e-99 364.4 233 78.5
Gorai.011G090500 Gossypium raimondii HOM05D007630 ORTHO05D009637 2.2e-97 359.4 242 75.2
Gohir.A10G157500 Gossypium hirsutum HOM05D007630 ORTHO05D009637 1.1e-96 357.1 242 74.8
Lsat_1_v5_gn_9_82660 Lactuca sativa HOM05D007630 ORTHO05D009637 8.0e-95 350.9 253 74.3
VMungo1215G0090 Vigna mungo HOM05D007630 ORTHO05D009637 4.0e-94 348.6 214 83.2
CDE05G2797 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 8.8e-94 347.4 229 75.1
AT5G49800 Arabidopsis thaliana HOM05D007630 ORTHO05D009637 3.4e-93 345.5 239 72.4
CDE05G1783 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 7.5e-93 344.4 230 73.5
AL8G23760 Arabidopsis lyrata HOM05D007630 ORTHO05D009637 1.8e-91 339.7 242 70.2
ATR1089G051 Amborella trichopoda HOM05D007630 ORTHO05D009637 5.4e-91 338.2 231 74.9
Sp6g11150 Schrenkiella parvula HOM05D007630 ORTHO05D009637 3.5e-90 335.5 234 73.9
PSO017G5941 Papaver somniferum HOM05D007630 ORTHO05D009637 7.7e-90 334.3 251 72.9
PSO170G3600 Papaver somniferum HOM05D007630 ORTHO05D009637 2.2e-89 332.8 251 72.5
Carub.0008s0968 Capsella rubella HOM05D007630 ORTHO05D009637 6.5e-89 331.3 240 68.3
CARHR258980 Cardamine hirsuta HOM05D007630 ORTHO05D009637 6.5e-89 331.3 239 71.1
TAR629G1327 Trochodendron aralioides HOM05D007630 ORTHO05D009637 7.2e-88 327.8 204 80.4
Gohir.D10G083200 Gossypium hirsutum HOM05D007630 ORTHO05D009637 6.1e-87 324.7 242 70.7
AUR62032498 Chenopodium quinoa HOM05D007630 ORTHO05D009637 8.0e-87 324.3 211 78.7
Aa31sc192G10 Aethionema arabicum HOM05D007630 ORTHO05D009637 1.4e-86 323.6 234 71.4
Oeu043594.1 Olea europaea HOM05D007630 ORTHO05D009637 8.6e-81 304.3 178 85.4
DCAR_028500 Daucus carota HOM05D007630 ORTHO05D009637 4.2e-80 302.0 204 76.5
SGA_v2.0_scaffold254G45223 Striga asiatica HOM05D007630 ORTHO05D009637 1.5e-77 293.5 235 66.4
Os11g0245500 Oryza sativa ssp. japonica HOM05D007630 ORTHO05D009637 2.4e-75 286.2 256 61.3
SEGI_35985 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 1.1e-72 277.3 233 60.9
Cfa004415 Carpinus fangiana HOM05D000089 ORTHO05D000104 2.3e-70 269.6 225 67.6
Dinv30982 Davidia involucrata HOM05D007630 ORTHO05D009637 7.3e-64 248.1 144 86.1
MBI06_g17062_MAGBIO Magnolia biondii HOM05D007630 ORTHO05D009637 3.6e-63 245.7 135 88.9
Mapoly0105s0042 Marchantia polymorpha HOM05D007630 ORTHO05D009637 1.1e-62 244.2 224 52.7
Zm00001eb168190 Zea mays HOM05D007630 ORTHO05D009637 5.4e-59 231.9 249 52.6
Gohir.D05G163000 Gossypium hirsutum HOM05D007630 ORTHO05D009637 1.6e-58 230.3 165 73.3
SMO198G0095 Selaginella moellendorffii HOM05D007630 ORTHO05D009637 3.5e-58 229.2 228 51.8
Sc03g0005590 Simmondsia chinensis HOM05D007630 ORTHO05D009637 7.8e-58 228.0 151 74.2
MD15G1445600 Malus domestica HOM05D007630 ORTHO05D009637 2.0e-29 133.7 83 78.3
SEGI_15718 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 1.0e-25 121.3 222 32.9
Dinv29656 Davidia involucrata HOM05D007630 ORTHO05D009637 1.3e-17 94.4 127 47.2
HanXRQChr09g0245071 Helianthus annuus HOM05D000066 ORTHO05D000055 1.1e-11 74.7 57 64.9


User provided reference genes

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