Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G1746 Cannabis sativa HOM05D007558 ORTHO05D009245 2.5e-104 382.5 245 100.0
TWI18G1040 Tripterygium wilfordii HOM05D007558 ORTHO05D009245 2.8e-15 86.7 97 55.7
COL.COLO4_24179 Corchorus olitorius HOM05D007558 ORTHO05D009245 4.7e-15 85.9 87 60.9
FAN07G0793 Fragaria x ananassa HOM05D007558 ORTHO05D009245 4.7e-15 85.9 93 63.4
RcHm_v2.0_Chr4g0443731 Rosa chinensis HOM05D007558 ORTHO05D009245 4.7e-15 85.9 132 50.0
FvH4_4g34300 Fragaria vesca HOM05D007558 ORTHO05D009245 6.2e-15 85.5 95 61.1
CiPaw.05G151900 Carya illinoinensis HOM05D007558 ORTHO05D009245 1.1e-14 84.7 77 57.1
MD13G1093000 Malus domestica HOM05D007558 ORTHO05D009245 1.4e-14 84.3 90 58.9
FAN22G1900 Fragaria x ananassa HOM05D007558 ORTHO05D009245 2.4e-14 83.6 95 62.1
FAN12G2944 Fragaria x ananassa HOM05D007558 ORTHO05D009245 3.1e-14 83.2 95 61.1
TPR.G11688 Trifolium pratense HOM05D007558 ORTHO05D009245 5.2e-14 82.4 86 59.3
Ciclev10032958m.g Citrus clementina HOM05D007558 ORTHO05D009245 6.9e-14 82.0 87 55.2
Gohir.A04G135600 Gossypium hirsutum HOM05D007558 ORTHO05D009245 1.2e-13 81.3 75 60.0
Gohir.D04G178700 Gossypium hirsutum HOM05D007558 ORTHO05D009245 1.2e-13 81.3 75 60.0
Gorai.012G171800 Gossypium raimondii HOM05D007558 ORTHO05D009245 1.2e-13 81.3 75 60.0
Manes.12G027900 Manihot esculenta HOM05D007558 ORTHO05D009245 1.2e-13 81.3 74 63.5
Lj4g0018280 Lotus japonicus HOM05D007558 ORTHO05D009245 2.6e-13 80.1 80 57.5
MD16G1094000 Malus domestica HOM05D007558 ORTHO05D009245 4.4e-13 79.3 94 52.1
Prupe.1G252500 Prunus persica HOM05D007558 ORTHO05D009245 5.8e-13 79.0 224 35.3
Glyma.02G035400 Glycine max HOM05D007558 ORTHO05D009245 7.6e-13 78.6 71 60.6
Glyma.08G286300 Glycine max HOM05D007558 ORTHO05D009245 7.6e-13 78.6 77 59.7
TPR.G11726 Trifolium pratense HOM05D007558 ORTHO05D009245 1.3e-12 77.8 81 56.8
QL03p060106 Quercus lobata HOM05D007558 ORTHO05D009245 2.2e-12 77.0 91 54.9
Thecc.02G251400 Theobroma cacao HOM05D007558 ORTHO05D009245 2.9e-12 76.6 80 58.8
Phvul.002G070800 Phaseolus vulgaris HOM05D007558 ORTHO05D009245 3.8e-12 76.3 72 63.9
VMungo1215G0509 Vigna mungo HOM05D007558 ORTHO05D009245 3.8e-12 76.3 72 63.9
Dinv15286 Davidia involucrata HOM05D000812 ORTHO05D000672 4.9e-12 75.9 72 62.5
Duzib268G0018 Durio zibethinus HOM05D007558 ORTHO05D009245 6.4e-12 75.5 81 59.3
Atru.chr11.2043 Acer truncatum HOM05D007558 ORTHO05D009245 8.4e-12 75.1 85 52.9
Potri.010G041600 Populus trichocarpa HOM05D007558 ORTHO05D009245 8.4e-12 75.1 105 49.5
Lalb_Chr09g0334981 Lupinus albus HOM05D007558 ORTHO05D009245 1.9e-11 73.9 64 64.1
PGR102G1011 Punica granatum HOM05D007558 ORTHO05D009245 1.9e-11 73.9 85 52.9
GSVIVG01013748001 Vitis vinifera HOM05D007558 ORTHO05D009245 1.9e-11 73.9 77 59.7
FAN17G0543 Fragaria x ananassa HOM05D007558 ORTHO05D009245 2.4e-11 73.6 97 56.7
ClCG05G025370 Citrullus lanatus HOM05D007558 ORTHO05D009245 3.2e-11 73.2 77 57.1
DCAR_007085 Daucus carota HOM05D007558 ORTHO05D009245 5.4e-11 72.4 75 50.7
Hma1.2p1_0536F.1_g173970 Hydrangea macrophylla HOM05D007558 ORTHO05D009245 7.1e-11 72.0 74 58.1
Cfa009155 Carpinus fangiana HOM05D007558 ORTHO05D009245 9.3e-11 71.6 60 58.3
Lalb_Chr05g0216831 Lupinus albus HOM05D007558 ORTHO05D009245 9.3e-11 71.6 59 66.1
Nn4g22760 Nelumbo nucifera HOM05D007558 ORTHO05D009245 9.3e-11 71.6 69 56.5
Phvul.003G060900 Phaseolus vulgaris HOM05D007558 ORTHO05D009245 9.3e-11 71.6 71 54.9
Sed0009378 Sechium edule HOM05D007558 ORTHO05D009245 2.1e-10 70.5 83 55.4
Nn3g16851 Nelumbo nucifera HOM05D007558 ORTHO05D009245 2.7e-10 70.1 69 60.9
Cpa.g.sc69.52 Carica papaya HOM05D001601 ORTHO05D002628 3.5e-10 69.7 82 53.7
MELO3C011993.2 Cucumis melo HOM05D007558 ORTHO05D009245 3.5e-10 69.7 76 59.2
Duzib248G0521 Durio zibethinus HOM05D007558 ORTHO05D009245 3.5e-10 69.7 86 54.7
Actinidia08162 Actinidia chinensis HOM05D007558 ORTHO05D009245 4.6e-10 69.3 73 58.9
CiPaw.06G071200 Carya illinoinensis HOM05D007558 ORTHO05D009245 1.0e-09 68.2 77 55.8
Gohir.A12G143200 Gossypium hirsutum HOM05D007558 ORTHO05D009245 1.0e-09 68.2 60 63.3
Gohir.D12G147900 Gossypium hirsutum HOM05D007558 ORTHO05D009245 1.0e-09 68.2 60 63.3
Gorai.008G159200 Gossypium raimondii HOM05D007558 ORTHO05D009245 1.0e-09 68.2 60 63.3
A02p16540 Brassica napus HOM05D008527 ORTHO05D010701 1.7e-09 67.4 93 47.3
BraA02t06712Z Brassica rapa HOM05D008527 ORTHO05D010701 1.7e-09 67.4 93 47.3
ECA233G1669 Erigeron canadensis HOM05D007558 ORTHO05D009245 1.7e-09 67.4 72 54.2
Migut.E00166 Erythranthe guttata HOM05D007558 ORTHO05D009245 2.3e-09 67.0 56 64.3
Medtr5g034200 Medicago truncatula HOM05D007558 ORTHO05D009245 2.3e-09 67.0 92 50.0
Gohir.A03G139000 Gossypium hirsutum HOM05D007558 ORTHO05D009245 3.9e-09 66.2 80 47.5
BolC2t08819H Brassica oleracea HOM05D008527 ORTHO05D010701 5.1e-09 65.9 93 47.3
Eucgr.B03316 Eucalyptus grandis HOM05D007558 ORTHO05D009245 5.1e-09 65.9 67 56.7
Manes.13G029400 Manihot esculenta HOM05D007558 ORTHO05D009245 5.1e-09 65.9 74 52.7
Gohir.D02G161900 Gossypium hirsutum HOM05D007558 ORTHO05D009245 8.7e-09 65.1 80 46.2
Lsat_1_v5_gn_8_155581 Lactuca sativa HOM05D007558 ORTHO05D009245 8.7e-09 65.1 87 47.1
TAR374G1667 Trochodendron aralioides HOM05D007558 ORTHO05D009245 1.1e-08 64.7 66 54.5
Nitab4.5_0004636g0010 Nicotiana tabacum HOM05D007558 ORTHO05D009245 1.5e-08 64.3 82 45.1
MSTRG.7902 Avicennia marina HOM05D007558 ORTHO05D009245 1.9e-08 63.9 114 40.4
DCAR_026537 Daucus carota HOM05D007558 ORTHO05D009245 1.9e-08 63.9 83 47.0
Lj2g0015975 Lotus japonicus HOM05D007558 ORTHO05D009245 1.9e-08 63.9 87 51.7
PGSC0003DMG400027920 Solanum tuberosum HOM05D007558 ORTHO05D009245 2.5e-08 63.5 68 51.5
Psat4g124320 Pisum sativum HOM05D007558 ORTHO05D009245 3.3e-08 63.2 87 46.0
VMungo0251G2708 Vigna mungo HOM05D007558 ORTHO05D009245 3.3e-08 63.2 76 47.4
AUR62014050 Chenopodium quinoa HOM05D023191 ORTHO05D009245 4.3e-08 62.8 148 42.6
CSS0045389 Camellia sinensis var. sinensis HOM05D007558 ORTHO05D009245 5.6e-08 62.4 62 58.1
Sopen04g014760 Solanum pennellii HOM05D007558 ORTHO05D009245 5.6e-08 62.4 68 47.1
Aqoxy3G02932 Aquilegia oxysepala HOM05D007558 ORTHO05D009245 7.3e-08 62.0 72 50.0
CSS0017958 Camellia sinensis var. sinensis HOM05D007558 ORTHO05D009245 7.3e-08 62.0 76 52.6
Sc11g0001140 Simmondsia chinensis HOM05D007558 ORTHO05D009245 9.6e-08 61.6 72 48.6
Carub.0002s1715 Capsella rubella HOM05D008527 ORTHO05D010701 1.3e-07 61.2 100 43.0
Nitab4.5_0000034g0280 Nicotiana tabacum HOM05D007558 ORTHO05D009245 1.3e-07 61.2 86 43.0
EL10Ac6g13681 Beta vulgaris HOM05D023191 ORTHO05D009245 2.1e-07 60.5 94 39.4
Aa31LG4G10480 Aethionema arabicum HOM05D008527 ORTHO05D010701 2.8e-07 60.1 87 48.3
Solyc04g026250.1 Solanum lycopersicum HOM05D007558 ORTHO05D009245 2.8e-07 60.1 68 47.1
MBI16_g27096_MAGBIO Magnolia biondii HOM05D007558 ORTHO05D009245 3.6e-07 59.7 74 50.0
Glyma.01G030000 Glycine max HOM05D007558 ORTHO05D009245 4.8e-07 59.3 75 50.7
Ah.02g129970 Amaranthus hybridus HOM05D023191 ORTHO05D009245 6.2e-07 58.9 81 44.4
Oeu056732.1 Olea europaea HOM05D007558 ORTHO05D009245 6.2e-07 58.9 52 59.6
CsaV3_5G031540 Cucumis sativus L. HOM05D001601 ORTHO05D002628 8.1e-07 58.5 53 64.2
AUR62005388 Chenopodium quinoa HOM05D023191 ORTHO05D009245 1.1e-06 58.2 94 39.4
BcaC03g15190 Brassica carinata HOM05D008527 ORTHO05D010701 1.4e-06 57.8 91 42.9
C02p27710 Brassica napus HOM05D008527 ORTHO05D010701 1.4e-06 57.8 91 42.9
CAN.G126.6 Capsicum annuum HOM05D007558 ORTHO05D009245 1.8e-06 57.4 74 41.9
Lsat_1_v5_gn_4_5541 Lactuca sativa HOM05D007558 ORTHO05D009245 2.4e-06 57.0 75 45.3
SGA_v2.0_scaffold8G04208 Striga asiatica HOM05D007558 ORTHO05D009245 5.3e-06 55.8 52 59.6
SalBow2G1747 Salvia bowleyana HOM05D007558 ORTHO05D009245 6.9e-06 55.5 48 60.4
THA.LOC104822151 Tarenaya hassleriana HOM05D008527 ORTHO05D010701 6.9e-06 55.5 97 45.4


User provided reference genes

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