Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G1736 Cannabis sativa HOM05D005470 ORTHO05D006855 1.7e-114 416.0 207 100.0
CANSAT56G1556 Cannabis sativa HOM05D005470 ORTHO05D006855 1.3e-90 336.7 201 86.1
QL03p049466 Quercus lobata HOM05D005470 ORTHO05D006855 4.1e-76 288.5 188 75.5
Dinv04663 Davidia involucrata HOM05D005470 ORTHO05D006855 5.3e-76 288.1 187 75.4
Haze_24781 Corylus avellana HOM05D005470 ORTHO05D006855 9.1e-76 287.3 189 72.5
Eucgr.H00804 Eucalyptus grandis HOM05D005470 ORTHO05D006855 1.5e-75 286.6 186 74.2
Hma1.2p1_1061F.1_g253380 Hydrangea macrophylla HOM05D005470 ORTHO05D006855 2.6e-75 285.8 185 74.6
GSVIVG01028578001 Vitis vinifera HOM05D005470 ORTHO05D006855 1.3e-74 283.5 184 76.6
FvH4_2g19300 Fragaria vesca HOM05D005470 ORTHO05D006855 1.7e-74 283.1 186 74.2
FAN24G1307 Fragaria x ananassa HOM05D005470 ORTHO05D006855 1.7e-74 283.1 186 74.2
Nn3g19926 Nelumbo nucifera HOM05D005470 ORTHO05D006855 2.2e-74 282.7 173 78.6
Manes.12G042650 Manihot esculenta HOM05D005470 ORTHO05D006855 2.9e-74 282.3 187 73.3
CiPaw.04G106400 Carya illinoinensis HOM05D005470 ORTHO05D006855 3.8e-74 282.0 187 72.2
MD10G1166100 Malus domestica HOM05D005470 ORTHO05D006855 3.8e-74 282.0 175 78.9
Cpa.g.sc8.172 Carica papaya HOM05D005470 ORTHO05D006855 5.0e-74 281.6 189 72.0
RcHm_v2.0_Chr6g0285101 Rosa chinensis HOM05D005470 ORTHO05D006855 8.5e-74 280.8 188 72.9
Atru.chr5.1498 Acer truncatum HOM05D005470 ORTHO05D006855 1.4e-73 280.0 187 72.2
Potri.002G240800 Populus trichocarpa HOM05D005470 ORTHO05D006855 1.4e-73 280.0 187 69.5
Sabra02G0183400 Salix brachista HOM05D005470 ORTHO05D006855 1.4e-73 280.0 187 70.6
vmacro02749 Vaccinium macrocarpon HOM05D005470 ORTHO05D006855 1.9e-73 279.6 195 70.8
Actinidia37584 Actinidia chinensis HOM05D005470 ORTHO05D006855 1.6e-72 276.6 173 76.9
Lalb_Chr19g0125551 Lupinus albus HOM05D005470 ORTHO05D006855 1.6e-72 276.6 187 73.3
TAR365G1033 Trochodendron aralioides HOM05D005470 ORTHO05D006855 1.6e-72 276.6 187 72.2
CSS0013378 Camellia sinensis var. sinensis HOM05D005470 ORTHO05D006855 2.7e-72 275.8 187 72.7
Thecc.01G227800 Theobroma cacao HOM05D005470 ORTHO05D006855 2.7e-72 275.8 190 68.4
Rhsim13G0044300 Rhododendron simsii HOM05D006020 ORTHO05D006855 6.1e-72 274.6 178 73.6
DCAR_018553 Daucus carota HOM05D005470 ORTHO05D006855 8.0e-72 274.2 187 70.6
Ca_07533_v3 Cicer arietinum L. HOM05D005470 ORTHO05D006855 1.4e-71 273.5 187 72.7
Duzib211G0062 Durio zibethinus HOM05D005470 ORTHO05D006855 3.0e-71 272.3 175 73.7
Glyma.18G172500 Glycine max HOM05D005470 ORTHO05D006855 3.9e-71 271.9 175 74.9
Gohir.A07G156000 Gossypium hirsutum HOM05D005470 ORTHO05D006855 3.9e-71 271.9 175 73.7
Gohir.D07G162300 Gossypium hirsutum HOM05D005470 ORTHO05D006855 3.9e-71 271.9 175 73.7
Gorai.001G185900 Gossypium raimondii HOM05D005470 ORTHO05D006855 3.9e-71 271.9 175 73.7
PGR083G1301 Punica granatum HOM05D005470 ORTHO05D006855 3.9e-71 271.9 174 78.2
EL10Ac7g17787 Beta vulgaris HOM05D005470 ORTHO05D006855 5.2e-71 271.6 173 74.0
TPR.G15281 Trifolium pratense HOM05D005470 ORTHO05D006855 5.2e-71 271.6 187 71.7
Psat3g144240 Pisum sativum HOM05D005470 ORTHO05D006855 8.8e-71 270.8 187 71.7
Aqoxy2G03764 Aquilegia oxysepala HOM05D005470 ORTHO05D006855 4.4e-70 268.5 187 70.1
PSO478G2025 Papaver somniferum HOM05D005470 ORTHO05D006855 4.4e-70 268.5 181 71.8
Nitab4.5_0000866g0080 Nicotiana tabacum HOM05D005470 ORTHO05D006855 5.7e-70 268.1 189 69.8
PSO017G3643 Papaver somniferum HOM05D005470 ORTHO05D006855 7.4e-70 267.7 181 71.8
Phvul.007G209400 Phaseolus vulgaris HOM05D005470 ORTHO05D006855 7.4e-70 267.7 175 73.7
Nitab4.5_0000866g0040 Nicotiana tabacum HOM05D005470 ORTHO05D006855 9.7e-70 267.3 189 69.3
arahy.Tifrunner.gnm1.ann1.07T9WF Arachis hypogaea HOM05D005470 ORTHO05D006855 1.3e-69 266.9 187 68.4
MSTRG.21429 Avicennia marina HOM05D005470 ORTHO05D006855 1.3e-69 266.9 187 69.0
Medtr7g058920 Medicago truncatula HOM05D005470 ORTHO05D006855 2.8e-69 265.8 187 69.5
VMungo0516G0001 Vigna mungo HOM05D005470 ORTHO05D006855 2.8e-69 265.8 178 72.5
Oeu015466.1 Olea europaea HOM05D005470 ORTHO05D006855 6.3e-69 264.6 181 70.7
Hund18358 Selenicereus undatus HOM05D005470 ORTHO05D006855 6.3e-69 264.6 175 72.0
Migut.D00523 Erythranthe guttata HOM05D005470 ORTHO05D006855 8.2e-69 264.2 178 71.9
Nitab4.5_0003790g0040 Nicotiana tabacum HOM05D005470 ORTHO05D006855 8.2e-69 264.2 180 72.2
AUR62031834 Chenopodium quinoa HOM05D005470 ORTHO05D006855 4.1e-68 261.9 187 66.8
ECA236G4489 Erigeron canadensis HOM05D005470 ORTHO05D006855 4.1e-68 261.9 173 73.4
PGSC0003DMG400002375 Solanum tuberosum HOM05D005470 ORTHO05D006855 4.1e-68 261.9 189 68.3
SGA_v2.0_scaffold8G04652 Striga asiatica HOM05D005470 ORTHO05D006855 4.1e-68 261.9 173 72.8
TWI75G1873 Tripterygium wilfordii HOM05D005470 ORTHO05D006855 4.1e-68 261.9 189 67.7
arahy.Tifrunner.gnm1.ann1.KE0QUS Arachis hypogaea HOM05D005470 ORTHO05D006855 5.3e-68 261.5 189 67.7
ClCG07G001860 Citrullus lanatus HOM05D005470 ORTHO05D006855 9.1e-68 260.8 175 71.4
CsaV3_3G028840 Cucumis sativus L. HOM05D005470 ORTHO05D006855 9.1e-68 260.8 175 72.0
MELO3C026704.2 Cucumis melo HOM05D005470 ORTHO05D006855 1.2e-67 260.4 188 66.5
Sed0016487 Sechium edule HOM05D005470 ORTHO05D006855 1.2e-67 260.4 177 72.3
CAN.G1273.33 Capsicum annuum HOM05D005470 ORTHO05D006855 1.6e-67 260.0 180 69.4
Cc01_g17220 Coffea canephora HOM05D005470 ORTHO05D006855 1.6e-67 260.0 187 67.9
Lj1g0018515 Lotus japonicus HOM05D005470 ORTHO05D006855 2.6e-67 259.2 173 71.1
Lj2A1133T34 Lonicera japonica HOM05D005470 ORTHO05D006855 3.5e-67 258.8 189 68.3
Sc17g0002580 Simmondsia chinensis HOM05D005470 ORTHO05D006855 3.5e-67 258.8 173 72.8
Sopen09g024670 Solanum pennellii HOM05D005470 ORTHO05D006855 3.5e-67 258.8 187 68.4
CDE01G0096 Ceratophyllum demersum HOM05D005470 ORTHO05D006855 5.9e-67 258.1 173 71.1
Migut.I00044 Erythranthe guttata HOM05D005470 ORTHO05D006855 5.9e-67 258.1 180 69.4
Ciclev10021316m.g Citrus clementina HOM05D005470 ORTHO05D006855 1.7e-66 256.5 173 72.3
HanXRQChr04g0110691 Helianthus annuus HOM05D005470 ORTHO05D006855 1.7e-66 256.5 173 71.7
Peaxi162Scf00107g01116 Petunia axillaris HOM05D005470 ORTHO05D006855 1.7e-66 256.5 187 66.3
CsaV3_6G036910 Cucumis sativus L. HOM05D005470 ORTHO05D006855 2.2e-66 256.1 175 69.7
arahy.Tifrunner.gnm1.ann1.4GE7F8 Arachis hypogaea HOM05D005470 ORTHO05D006855 2.9e-66 255.8 190 66.8
Sp2g19240 Schrenkiella parvula HOM05D005470 ORTHO05D006855 5.0e-66 255.0 187 65.8
Solyc09g061680.3 Solanum lycopersicum HOM05D005470 ORTHO05D006855 8.5e-66 254.2 187 67.9
THA.LOC104802678 Tarenaya hassleriana HOM05D005470 ORTHO05D006855 2.5e-65 252.7 178 68.5
C07p39460 Brassica napus HOM05D005470 ORTHO05D006855 4.2e-65 251.9 187 64.2
Aa31sc866G40 Aethionema arabicum HOM05D005470 ORTHO05D006855 5.5e-65 251.5 187 65.2
BraA06t26801Z Brassica rapa HOM05D005470 ORTHO05D006855 5.5e-65 251.5 187 64.2
MBI07_g00286_MAGBIO Magnolia biondii HOM05D004483 ORTHO05D005609 9.4e-65 250.8 164 75.0
ATR0736G181 Amborella trichopoda HOM05D005470 ORTHO05D006855 1.6e-64 250.0 178 66.9
BolC7t44465H Brassica oleracea HOM05D005470 ORTHO05D006855 1.6e-64 250.0 187 63.6
BcaC06g30753 Brassica carinata HOM05D005470 ORTHO05D006855 2.7e-64 249.2 187 63.6
Lsat_1_v5_gn_8_90101 Lactuca sativa HOM05D005470 ORTHO05D006855 3.6e-64 248.8 177 71.8
HPP92_021568 Vanilla planifolia HOM05D005470 ORTHO05D006855 3.6e-64 248.8 175 69.7
Os03g0851800 Oryza sativa ssp. japonica HOM05D005470 ORTHO05D006855 4.7e-64 248.4 177 67.2
AL8G22020 Arabidopsis lyrata HOM05D005470 ORTHO05D006855 6.1e-64 248.1 187 63.6
Ah.08g214020 Amaranthus hybridus HOM05D005470 ORTHO05D006855 1.4e-63 246.9 200 62.0
Thhalv10004618m.g Eutrema salsugineum HOM05D005470 ORTHO05D006855 1.4e-63 246.9 187 63.6
AT5G48840 Arabidopsis thaliana HOM05D005470 ORTHO05D006855 4.0e-63 245.4 187 62.6
CARHR182880 Cardamine hirsuta HOM05D005470 ORTHO05D006855 8.8e-63 244.2 178 65.7
Carub.0008s0857 Capsella rubella HOM05D005470 ORTHO05D006855 4.4e-62 241.9 183 62.3
Zm00001eb064670 Zea mays HOM05D005470 ORTHO05D006855 1.7e-61 240.0 175 66.3
Cfa002558 Carpinus fangiana HOM05D005470 ORTHO05D006855 7.7e-59 231.1 189 62.4
Prupe.8G204600 Prunus persica HOM05D005470 ORTHO05D006855 1.0e-58 230.7 152 72.4
SEGI_32261 Sequoiadendron giganteum HOM05D005470 ORTHO05D006855 2.5e-57 226.1 173 61.8
AUR62008875 Chenopodium quinoa HOM05D005470 ORTHO05D006855 9.4e-57 224.2 153 71.9
Pp3c24_12730 Physcomitrium patens HOM05D005470 ORTHO05D006855 4.0e-55 218.8 184 57.1
SMO351G0371 Selaginella moellendorffii HOM05D005470 ORTHO05D006855 1.2e-54 217.2 173 60.1
SMO144G0038 Selaginella moellendorffii HOM05D005470 ORTHO05D006855 2.0e-54 216.5 188 54.3
vmacro15783 Vaccinium macrocarpon HOM05D005470 ORTHO05D006855 2.6e-54 216.1 140 74.3
Mapoly0006s0023 Marchantia polymorpha HOM05D005470 ORTHO05D006855 4.4e-54 215.3 173 61.8
A06p38870 Brassica napus HOM05D006020 ORTHO05D007665 5.9e-51 204.9 161 61.5
SHI28627 Sapria himalayana HOM05D005470 ORTHO05D006855 3.3e-49 199.1 165 62.4
BcaC06g30729 Brassica carinata HOM05D005470 ORTHO05D006855 4.2e-49 198.7 151 62.3
CBR_g41676 Chara braunii HOM05D005470 ORTHO05D006855 2.8e-48 196.1 190 52.1
Hma1.2p1_1061F.1_g253390 Hydrangea macrophylla HOM05D005470 ORTHO05D006855 3.5e-43 179.1 106 79.2
MCO10G244 Micromonas commoda HOM05D005470 ORTHO05D006855 3.6e-40 169.1 185 48.1
vmacro15781 Vaccinium macrocarpon HOM05D005470 ORTHO05D006855 2.2e-37 159.8 111 72.1
SEGI_26814 Sequoiadendron giganteum HOM05D005470 ORTHO05D006855 2.4e-36 156.4 101 70.3
TAR365G0091 Trochodendron aralioides HOM05D005470 ORTHO05D006855 9.2e-36 154.5 106 70.8
Glyma.08G355700 Glycine max HOM05D005470 ORTHO05D006855 6.2e-32 141.7 175 48.6
unitig_92.g28105 Utricularia gibba HOM05D005470 ORTHO05D006855 6.2e-32 141.7 126 57.9
arahy.Tifrunner.gnm1.ann1.K5YBAW Arachis hypogaea HOM05D005470 ORTHO05D006855 1.2e-27 127.5 124 57.3
vmacro23327 Vaccinium macrocarpon HOM05D005470 ORTHO05D006855 1.6e-27 127.1 81 79.0
Cre02.g090150 Chlamydomonas reinhardtii HOM05D005470 ORTHO05D006855 3.5e-27 125.9 97 58.8
FAN15G3610 Fragaria x ananassa HOM05D005470 ORTHO05D006855 2.3e-23 113.2 73 76.7
MD05G1177900 Malus domestica HOM05D005470 ORTHO05D006855 5.2e-23 112.1 163 44.8
Haze_26957 Corylus avellana HOM05D005470 ORTHO05D006855 6.8e-23 111.7 170 40.6
Nn1g07786 Nelumbo nucifera HOM05D005470 ORTHO05D006855 2.9e-21 106.3 82 62.2
arahy.Tifrunner.gnm1.ann1.M1HUIQ Arachis hypogaea HOM05D005470 ORTHO05D006855 9.2e-20 101.3 120 53.3
COL.COLO4_06654 Corchorus olitorius HOM05D005470 ORTHO05D006855 2.1e-19 100.1 68 69.1
HanXRQChr16g0514371 Helianthus annuus HOM05D005470 ORTHO05D006855 2.3e-18 96.7 67 65.7
Nn1g07785 Nelumbo nucifera HOM05D005470 ORTHO05D006855 1.9e-17 93.6 48 81.2
Atru.chr5.2014 Acer truncatum HOM05D005470 ORTHO05D006855 9.5e-17 91.3 52 73.1
Atru.chr5.2015 Acer truncatum HOM05D005470 ORTHO05D006855 2.8e-16 89.7 70 68.6
Cfa025604 Carpinus fangiana HOM05D005470 ORTHO05D006855 1.4e-15 87.4 119 47.1
arahy.Tifrunner.gnm1.ann1.GL96XS Arachis hypogaea HOM05D005470 ORTHO05D006855 1.8e-15 87.0 91 48.4
MELO3C014350.2 Cucumis melo HOM05D005470 ORTHO05D006855 1.4e-12 77.4 60 60.0
CsaV3_1G001100 Cucumis sativus L. HOM05D005470 ORTHO05D006855 1.9e-12 77.0 48 77.1
arahy.Tifrunner.gnm1.ann1.HRPB72 Arachis hypogaea HOM05D005470 ORTHO05D006855 5.4e-12 75.5 83 48.2
SEGI_11949 Sequoiadendron giganteum HOM05D005470 ORTHO05D006855 9.2e-12 74.7 68 51.5


User provided reference genes

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