Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G1692 Cannabis sativa HOM05D007367 ORTHO05D008866 2.4e-96 355.5 184 100.0
Cfa012305 Carpinus fangiana HOM05D007367 ORTHO05D008866 4.9e-49 198.4 168 63.7
Prupe.5G013300 Prunus persica HOM05D007367 ORTHO05D008866 1.9e-48 196.4 168 57.1
COL.COLO4_16748 Corchorus olitorius HOM05D007367 ORTHO05D008866 5.4e-48 194.9 177 56.5
CiPaw.11G074200 Carya illinoinensis HOM05D007367 ORTHO05D008866 2.1e-47 193.0 161 64.6
Duzib068G0439 Durio zibethinus HOM05D007367 ORTHO05D008866 7.9e-47 191.0 158 62.7
ClCG07G011120 Citrullus lanatus HOM05D007367 ORTHO05D008866 2.3e-46 189.5 178 55.6
MD03G1130300 Malus domestica HOM05D007367 ORTHO05D008866 5.1e-46 188.3 164 57.3
QL93p0143_0020 Quercus lobata HOM05D007367 ORTHO05D008866 1.1e-45 187.2 166 59.0
Thecc.03G320300 Theobroma cacao HOM05D007367 ORTHO05D008866 1.5e-45 186.8 161 59.6
GSVIVG01036886001 Vitis vinifera HOM05D007367 ORTHO05D008866 1.5e-45 186.8 184 54.3
Ciclev10012881m.g Citrus clementina HOM05D007367 ORTHO05D008866 1.9e-45 186.4 170 58.8
MELO3C016218.2 Cucumis melo HOM05D007367 ORTHO05D008866 3.3e-45 185.7 170 57.1
QL12p003620 Quercus lobata HOM05D007367 ORTHO05D008866 3.3e-45 185.7 166 58.4
Gohir.D12G204000 Gossypium hirsutum HOM05D007367 ORTHO05D008866 6.2e-44 181.4 160 58.1
Manes.10G067900 Manihot esculenta HOM05D007367 ORTHO05D008866 1.8e-43 179.9 160 59.4
THA.LOC104811080 Tarenaya hassleriana HOM05D007367 ORTHO05D008866 4.0e-43 178.7 159 59.1
Actinidia32792 Actinidia chinensis HOM05D007367 ORTHO05D008866 5.3e-43 178.3 160 58.1
FAN08G2564 Fragaria x ananassa HOM05D007367 ORTHO05D008866 5.3e-43 178.3 168 54.2
FAN13G0070 Fragaria x ananassa HOM05D007367 ORTHO05D008866 6.9e-43 177.9 170 54.1
CsaV3_4G007130 Cucumis sativus L. HOM05D007367 ORTHO05D008866 9.0e-43 177.6 156 57.1
FvH4_5g25140 Fragaria vesca HOM05D007367 ORTHO05D008866 1.5e-42 176.8 168 53.6
Dinv37431 Davidia involucrata HOM05D007367 ORTHO05D008866 2.6e-42 176.0 164 57.9
Gohir.A12G201200 Gossypium hirsutum HOM05D007367 ORTHO05D008866 3.4e-42 175.6 160 56.9
Potri.004G235300 Populus trichocarpa HOM05D007367 ORTHO05D008866 3.4e-42 175.6 158 56.3
RcHm_v2.0_Chr7g0215331 Rosa chinensis HOM05D007367 ORTHO05D008866 3.4e-42 175.6 168 54.2
Gorai.008G218800 Gossypium raimondii HOM05D007367 ORTHO05D008866 2.9e-41 172.6 153 57.5
Sc07g0008020 Simmondsia chinensis HOM05D007367 ORTHO05D008866 3.8e-41 172.2 171 55.0
Nn1g01985 Nelumbo nucifera HOM05D007367 ORTHO05D008866 8.4e-41 171.0 167 55.7
Sed0007825 Sechium edule HOM05D007367 ORTHO05D008866 1.1e-40 170.6 165 55.2
TWI38G2056 Tripterygium wilfordii HOM05D007367 ORTHO05D008866 1.1e-40 170.6 171 55.0
SalBow4G0967 Salvia bowleyana HOM05D007367 ORTHO05D008866 1.4e-40 170.2 166 52.4
TWI38G0281 Tripterygium wilfordii HOM05D007367 ORTHO05D008866 1.4e-40 170.2 165 55.8
Cc08_g05930 Coffea canephora HOM05D007367 ORTHO05D008866 3.2e-40 169.1 152 57.2
TAR374G1177 Trochodendron aralioides HOM05D007367 ORTHO05D008866 5.5e-40 168.3 152 57.9
Lj4g0011102 Lotus japonicus HOM05D007367 ORTHO05D008866 2.7e-39 166.0 179 48.6
Glyma.02G045600 Glycine max HOM05D007367 ORTHO05D008866 1.0e-38 164.1 171 48.0
Medtr8g075140 Medicago truncatula HOM05D007367 ORTHO05D008866 1.3e-38 163.7 171 48.0
Lalb_Chr16g0391641 Lupinus albus HOM05D007367 ORTHO05D008866 1.8e-38 163.3 164 51.2
Glyma.16G123600 Glycine max HOM05D007367 ORTHO05D008866 3.9e-38 162.2 171 46.8
Aa31LG6G1950 Aethionema arabicum HOM05D007367 ORTHO05D008866 5.1e-38 161.8 166 52.4
CARHR226150 Cardamine hirsuta HOM05D007367 ORTHO05D008866 5.1e-38 161.8 159 53.5
ECA246G3716 Erigeron canadensis HOM05D007367 ORTHO05D008866 2.5e-37 159.5 166 50.0
PGR042G2818 Punica granatum HOM05D007367 ORTHO05D008866 3.3e-37 159.1 165 52.7
TPR.G19504 Trifolium pratense HOM05D007367 ORTHO05D008866 3.3e-37 159.1 163 50.9
Carub.0007s2188 Capsella rubella HOM05D007367 ORTHO05D008866 5.7e-37 158.3 171 52.6
arahy.Tifrunner.gnm1.ann1.H9MF1T Arachis hypogaea HOM05D007367 ORTHO05D008866 1.3e-36 157.1 160 48.8
Sp7g17960 Schrenkiella parvula HOM05D007367 ORTHO05D008866 1.3e-36 157.1 171 49.7
Atru.chr8.2637 Acer truncatum HOM05D007367 ORTHO05D008866 1.6e-36 156.8 159 56.0
Sabra01G0179900 Salix brachista HOM05D000929 ORTHO05D004813 2.8e-36 156.0 158 51.9
VMungo0251G1728 Vigna mungo HOM05D007367 ORTHO05D008866 6.2e-36 154.8 161 48.4
Sopen12g032050 Solanum pennellii HOM05D007367 ORTHO05D008866 1.1e-35 154.1 161 50.9
EL10Ac8g19394 Beta vulgaris HOM05D007367 ORTHO05D008866 1.8e-35 153.3 160 50.0
Solyc12g096170.2 Solanum lycopersicum HOM05D007367 ORTHO05D008866 3.1e-35 152.5 161 50.9
Aqoxy7G01946 Aquilegia oxysepala HOM05D000773 ORTHO05D008866 5.3e-35 151.8 154 51.3
Lsat_1_v5_gn_5_43721 Lactuca sativa HOM05D007367 ORTHO05D008866 5.3e-35 151.8 164 48.2
SGA_v2.0_scaffold89G27372 Striga asiatica HOM05D007367 ORTHO05D008866 5.3e-35 151.8 159 51.6
FAN04G0859 Fragaria x ananassa HOM05D007367 ORTHO05D008866 6.9e-35 151.4 168 50.6
FAN18G1407 Fragaria x ananassa HOM05D007367 ORTHO05D008866 9.0e-35 151.0 168 50.0
Migut.A00520 Erythranthe guttata HOM05D007367 ORTHO05D008866 1.5e-34 150.2 153 51.6
MSTRG.25748 Avicennia marina HOM05D007367 ORTHO05D008866 3.4e-34 149.1 159 52.8
Phvul.003G266000 Phaseolus vulgaris HOM05D007367 ORTHO05D008866 3.4e-34 149.1 181 44.8
AT4G19350 Arabidopsis thaliana HOM05D007367 ORTHO05D008866 7.6e-34 147.9 159 50.3
HanXRQChr02g0034081 Helianthus annuus HOM05D007367 ORTHO05D008866 1.3e-33 147.1 152 50.0
arahy.Tifrunner.gnm1.ann1.I4PABW Arachis hypogaea HOM05D007367 ORTHO05D008866 5.0e-33 145.2 196 41.3
AL7G34810 Arabidopsis lyrata HOM05D007367 ORTHO05D008866 8.4e-33 144.4 153 50.3
CDE02G0575 Ceratophyllum demersum HOM05D007367 ORTHO05D008866 1.9e-32 143.3 163 46.6
Peaxi162Scf00876g00431 Petunia axillaris HOM05D007367 ORTHO05D008866 2.5e-32 142.9 172 45.3
CAN.G947.33 Capsicum annuum HOM05D007367 ORTHO05D008866 5.5e-32 141.7 154 51.3
BcaNung01789 Brassica carinata HOM05D007367 ORTHO05D008866 7.2e-32 141.4 159 47.2
BcaC09g51422 Brassica carinata HOM05D007367 ORTHO05D008866 4.6e-31 138.7 159 47.8
Psat4g102200 Pisum sativum HOM05D007367 ORTHO05D008866 4.6e-31 138.7 168 42.9
C01p13270 Brassica napus HOM05D007367 ORTHO05D008866 6.1e-31 138.3 159 47.8
A01p11220 Brassica napus HOM05D007367 ORTHO05D008866 1.0e-30 137.5 159 46.5
BolC1t01302H Brassica oleracea HOM05D007367 ORTHO05D008866 3.0e-30 136.0 159 46.5
PSO063G4690 Papaver somniferum HOM05D007367 ORTHO05D008866 8.7e-30 134.4 151 49.0
BraA01t01068Z Brassica rapa HOM05D007367 ORTHO05D008866 1.1e-29 134.0 159 45.9
Os08g0162500 Oryza sativa ssp. japonica HOM05D007367 ORTHO05D008866 3.3e-29 132.5 159 41.5
HPP92_022724 Vanilla planifolia HOM05D007367 ORTHO05D008866 1.4e-27 127.1 153 44.4
vmacro00097 Vaccinium macrocarpon HOM05D007367 ORTHO05D008866 4.5e-26 122.1 221 36.2
PGSC0003DMG400029288 Solanum tuberosum HOM05D007367 ORTHO05D008866 1.0e-25 120.9 175 42.9
DCAR_002187 Daucus carota HOM05D007367 ORTHO05D008866 1.7e-25 120.2 107 60.7
Zm00001eb415480 Zea mays HOM05D007367 ORTHO05D008866 1.4e-24 117.1 150 40.0
PSO675G5685 Papaver somniferum HOM05D007367 ORTHO05D008866 1.9e-24 116.7 140 47.1
unitig_748.g8147 Utricularia gibba HOM05D007367 ORTHO05D008866 5.5e-24 115.2 172 38.4
Ah.09g231810 Amaranthus hybridus HOM05D007367 ORTHO05D008866 2.1e-23 113.2 160 40.6
AUR62030407 Chenopodium quinoa HOM05D007367 ORTHO05D008866 2.8e-20 102.8 163 39.3
Haze_08425 Corylus avellana HOM05D007367 ORTHO05D008866 2.8e-20 102.8 106 56.6
Hund14309 Selenicereus undatus HOM05D007367 ORTHO05D008866 8.2e-20 101.3 175 40.0
CDE11G0580 Ceratophyllum demersum HOM05D007367 ORTHO05D008866 1.4e-19 100.5 129 42.6
Thecc.04G178000 Theobroma cacao HOM05D000090 ORTHO05D001322 4.1e-19 99.0 101 52.5
Nitab4.5_0011129g0040 Nicotiana tabacum HOM05D007367 ORTHO05D008866 1.5e-18 97.1 129 41.9
Thhalv10026808m.g Eutrema salsugineum HOM05D007367 ORTHO05D008866 2.2e-17 93.2 100 49.0
Actinidia01248 Actinidia chinensis HOM05D007367 ORTHO05D008866 3.3e-13 79.3 83 54.2
Eucgr.E01150 Eucalyptus grandis HOM05D007367 ORTHO05D008866 9.7e-13 77.8 84 48.8
Oeu046776.1 Olea europaea HOM05D007367 ORTHO05D008866 2.2e-12 76.6 97 47.4
Nitab4.5_0001913g0180 Nicotiana tabacum HOM05D007367 ORTHO05D008866 6.3e-12 75.1 125 39.2
Oeu046774.1 Olea europaea HOM05D007367 ORTHO05D008866 1.6e-10 70.5 61 62.3
Atru.chr8.2641 Acer truncatum HOM05D007367 ORTHO05D008866 1.0e-09 67.8 93 45.2
Cpa.g.sc103.6 Carica papaya HOM05D007367 ORTHO05D008866 1.3e-09 67.4 70 51.4
DCAR_002186 Daucus carota HOM05D007367 ORTHO05D008866 3.8e-09 65.9 79 45.6
SEGI_16341 Sequoiadendron giganteum HOM05D007367 ORTHO05D008866 2.5e-08 63.2 102 38.2
Pp3c23_7640 Physcomitrium patens HOM05D007367 ORTHO05D008866 5.5e-08 62.0 162 25.9
Gohir.A08G148800 Gossypium hirsutum HOM05D036757 ORTHO05D048069 4.7e-07 58.9 106 42.5


User provided reference genes

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