Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G1612 Cannabis sativa HOM05D004965 ORTHO05D004401 4.2e-55 218.0 130 100.0
FAN22G1750 Fragaria x ananassa HOM05D004965 ORTHO05D004401 1.3e-14 83.6 111 45.9
Dinv24933 Davidia involucrata HOM05D004965 ORTHO05D004401 1.6e-14 83.2 116 46.6
Prupe.1G263100 Prunus persica HOM05D004965 ORTHO05D004401 2.8e-14 82.4 114 50.9
FAN07G0801 Fragaria x ananassa HOM05D004965 ORTHO05D004401 4.8e-14 81.6 120 43.3
FvH4_4g35400 Fragaria vesca HOM05D004965 ORTHO05D004401 8.1e-14 80.9 120 43.3
Thecc.02G237300 Theobroma cacao HOM05D004965 ORTHO05D004401 1.1e-13 80.5 132 45.5
RcHm_v2.0_Chr4g0445011 Rosa chinensis HOM05D004965 ORTHO05D004401 1.4e-13 80.1 123 43.1
Duzib248G0243 Durio zibethinus HOM05D004965 ORTHO05D004401 1.8e-13 79.7 63 65.1
Atru.chr11.1915 Acer truncatum HOM05D004965 ORTHO05D004401 2.4e-13 79.3 134 56.7
Ciclev10033175m.g Citrus clementina HOM05D004965 ORTHO05D004401 2.4e-13 79.3 119 47.1
MD16G1082900 Malus domestica HOM05D004965 ORTHO05D004401 3.1e-13 79.0 111 43.2
CiPaw.06G078100 Carya illinoinensis HOM05D004965 ORTHO05D004401 9.0e-13 77.4 114 44.7
ClCG08G009090 Citrullus lanatus HOM05D004965 ORTHO05D004401 1.5e-12 76.6 105 46.7
Duzib251G0216 Durio zibethinus HOM05D004965 ORTHO05D004401 2.0e-12 76.3 124 45.2
Gohir.D01G133500 Gossypium hirsutum HOM05D004965 ORTHO05D004401 2.0e-12 76.3 44 84.1
Gorai.002G165000 Gossypium raimondii HOM05D004965 ORTHO05D004401 2.0e-12 76.3 44 84.1
FAN12G3850 Fragaria x ananassa HOM05D004965 ORTHO05D004401 5.8e-12 74.7 102 45.1
Potri.010G039800 Populus trichocarpa HOM05D004965 ORTHO05D004401 5.8e-12 74.7 124 42.7
TAR374G1442 Trochodendron aralioides HOM05D004965 ORTHO05D004401 7.6e-12 74.3 111 42.3
Gohir.A01G142000 Gossypium hirsutum HOM05D004965 ORTHO05D004401 9.9e-12 73.9 52 73.1
MD13G1083500 Malus domestica HOM05D004965 ORTHO05D004401 9.9e-12 73.9 111 44.1
GSVIVG01020127001 Vitis vinifera HOM05D004965 ORTHO05D004401 2.2e-11 72.8 111 43.2
CSS0043755 Camellia sinensis var. sinensis HOM05D004965 ORTHO05D004401 2.9e-11 72.4 110 45.5
CiPaw.05G143500 Carya illinoinensis HOM05D004965 ORTHO05D004401 3.8e-11 72.0 132 39.4
MELO3C026507.2 Cucumis melo HOM05D004965 ORTHO05D004401 1.1e-10 70.5 48 79.2
Lj2g0004313 Lotus japonicus HOM05D004965 ORTHO05D004401 1.1e-10 70.5 54 68.5
Glyma.02G025700 Glycine max HOM05D004965 ORTHO05D004401 2.4e-10 69.3 50 74.0
Lalb_Chr05g0217401 Lupinus albus HOM05D004965 ORTHO05D004401 2.4e-10 69.3 118 39.0
MBI01_g13075_MAGBIO Magnolia biondii HOM05D004965 ORTHO05D004401 2.4e-10 69.3 67 53.7
Nn3g17067 Nelumbo nucifera HOM05D004965 ORTHO05D004401 2.4e-10 69.3 48 75.0
Gohir.A03G144700 Gossypium hirsutum HOM05D004965 ORTHO05D004401 3.2e-10 68.9 44 79.5
TAR629G2889 Trochodendron aralioides HOM05D004965 ORTHO05D004401 3.2e-10 68.9 68 58.8
Duzib268G0529 Durio zibethinus HOM05D004965 ORTHO05D004401 4.2e-10 68.6 120 40.0
Hund25308 Selenicereus undatus HOM05D004965 ORTHO05D004401 4.2e-10 68.6 61 62.3
Potri.008G191500 Populus trichocarpa HOM05D004965 ORTHO05D004401 5.4e-10 68.2 118 39.8
Actinidia12285 Actinidia chinensis HOM05D004965 ORTHO05D004401 7.1e-10 67.8 102 43.1
Manes.05G094200 Manihot esculenta HOM05D004965 ORTHO05D004401 7.1e-10 67.8 119 40.3
Cc11_g13890 Coffea canephora HOM05D004965 ORTHO05D004401 9.3e-10 67.4 112 42.0
Glyma.01G038900 Glycine max HOM05D004965 ORTHO05D004401 9.3e-10 67.4 133 39.8
Psat2g116360 Pisum sativum HOM05D004965 ORTHO05D004401 9.3e-10 67.4 120 40.0
EL10Ac6g13083 Beta vulgaris HOM05D004965 ORTHO05D004401 1.2e-09 67.0 52 69.2
Phvul.002G079000 Phaseolus vulgaris HOM05D004965 ORTHO05D004401 1.2e-09 67.0 124 44.4
CsaV3_6G036050 Cucumis sativus L. HOM05D004965 ORTHO05D004401 1.6e-09 66.6 44 75.0
Gohir.D02G167800 Gossypium hirsutum HOM05D004965 ORTHO05D004401 2.1e-09 66.2 44 75.0
Gorai.005G188200 Gossypium raimondii HOM05D004965 ORTHO05D004401 2.1e-09 66.2 44 75.0
Lalb_Chr09g0326631 Lupinus albus HOM05D004965 ORTHO05D004401 2.7e-09 65.9 118 41.5
arahy.Tifrunner.gnm1.ann1.0GIF91 Arachis hypogaea HOM05D004965 ORTHO05D004401 3.5e-09 65.5 31 96.8
Nn4g22977 Nelumbo nucifera HOM05D004965 ORTHO05D004401 3.5e-09 65.5 47 70.2
Sc04g0008760 Simmondsia chinensis HOM05D004965 ORTHO05D004401 3.5e-09 65.5 37 78.4
CsaV3_5G032070 Cucumis sativus L. HOM05D031204 ORTHO05D004401 4.6e-09 65.1 118 41.5
Medtr5g037140 Medicago truncatula HOM05D004965 ORTHO05D004401 4.6e-09 65.1 130 39.2
MSTRG.2369 Avicennia marina HOM05D004965 ORTHO05D004401 7.8e-09 64.3 117 40.2
Lalb_Chr16g0382641 Lupinus albus HOM05D004965 ORTHO05D004401 1.0e-08 63.9 55 60.0
Lsat_1_v5_gn_8_161261 Lactuca sativa HOM05D004965 ORTHO05D004401 1.3e-08 63.5 54 63.0
Manes.15G177900 Manihot esculenta HOM05D004965 ORTHO05D004401 2.3e-08 62.8 50 56.0
TAR369G0013 Trochodendron aralioides HOM05D004965 ORTHO05D004401 3.0e-08 62.4 108 38.9
Dinv31145 Davidia involucrata HOM05D004965 ORTHO05D004401 5.1e-08 61.6 46 69.6
PGR119G0489 Punica granatum HOM05D004965 ORTHO05D004401 6.6e-08 61.2 45 66.7
Aqoxy3G03187 Aquilegia oxysepala HOM05D004965 ORTHO05D004401 8.7e-08 60.8 111 38.7
MELO3C012043.2 Cucumis melo HOM05D031204 ORTHO05D004401 8.7e-08 60.8 119 41.2
MBI04_g09739_MAGBIO Magnolia biondii HOM05D004965 ORTHO05D004401 8.7e-08 60.8 38 78.9
Cpa.g.sc14.63 Carica papaya HOM05D004965 ORTHO05D004401 1.1e-07 60.5 45 64.4
DCAR_026576 Daucus carota HOM05D004965 ORTHO05D004401 1.1e-07 60.5 46 65.2
PGSC0003DMG400022630 Solanum tuberosum HOM05D004965 ORTHO05D004401 1.1e-07 60.5 37 78.4
DCAR_006716 Daucus carota HOM05D004965 ORTHO05D004401 1.5e-07 60.1 42 64.3
Eucgr.B02578 Eucalyptus grandis HOM05D004965 ORTHO05D004401 1.5e-07 60.1 111 38.7
Aqoxy3G00848 Aquilegia oxysepala HOM05D004965 ORTHO05D004401 1.9e-07 59.7 61 59.0
CiPaw.04G021200 Carya illinoinensis HOM05D004965 ORTHO05D004401 1.9e-07 59.7 47 66.0
FAN17G0917 Fragaria x ananassa HOM05D004965 ORTHO05D004401 1.9e-07 59.7 107 37.4
CiPaw.03G032200 Carya illinoinensis HOM05D004965 ORTHO05D004401 2.5e-07 59.3 112 36.6
Thecc.04G069500 Theobroma cacao HOM05D004965 ORTHO05D004401 2.5e-07 59.3 67 50.7
vmacro16304 Vaccinium macrocarpon HOM05D004965 ORTHO05D004401 2.5e-07 59.3 29 86.2
Dinv33690 Davidia involucrata HOM05D004965 ORTHO05D004401 4.3e-07 58.5 35 77.1
QL02p079418 Quercus lobata HOM05D004965 ORTHO05D004401 4.3e-07 58.5 31 80.6
Sabra10G0027200 Salix brachista HOM05D004965 ORTHO05D004401 4.3e-07 58.5 108 38.0
CSS0011493 Camellia sinensis var. sinensis HOM05D004965 ORTHO05D004401 5.6e-07 58.2 54 57.4
PSO591G0153 Papaver somniferum HOM05D044922 ORTHO05D050178 7.3e-07 57.8 68 47.1
TAR622G1192 Trochodendron aralioides HOM05D004965 ORTHO05D004401 7.3e-07 57.8 99 40.4
Actinidia06052 Actinidia chinensis HOM05D004965 ORTHO05D004401 9.6e-07 57.4 52 55.8
Solyc05g006610.4 Solanum lycopersicum HOM05D004965 ORTHO05D004401 9.6e-07 57.4 37 75.7
Sopen05g002550 Solanum pennellii HOM05D004965 ORTHO05D004401 9.6e-07 57.4 37 75.7
Haze_14606 Corylus avellana HOM05D004965 ORTHO05D004401 1.3e-06 57.0 44 65.9
Atru.chr8.2466 Acer truncatum HOM05D004965 ORTHO05D004401 1.6e-06 56.6 113 41.6
ClCG05G024840 Citrullus lanatus HOM05D031204 ORTHO05D004401 1.6e-06 56.6 113 38.9
SalBow8G5011 Salvia bowleyana HOM05D004965 ORTHO05D004401 1.6e-06 56.6 47 61.7
COL.COLO4_36990 Corchorus olitorius HOM05D004965 ORTHO05D004401 2.1e-06 56.2 32 78.1
DCAR_025362 Daucus carota HOM05D004965 ORTHO05D004401 2.1e-06 56.2 42 61.9
Gohir.A07G216700 Gossypium hirsutum HOM05D004965 ORTHO05D004401 2.8e-06 55.8 31 80.6
Gohir.D07G223500 Gossypium hirsutum HOM05D004965 ORTHO05D004401 2.8e-06 55.8 31 80.6
Gorai.001G257800 Gossypium raimondii HOM05D004965 ORTHO05D004401 2.8e-06 55.8 31 80.6
Lju41A28T116 Lonicera japonica HOM05D004965 ORTHO05D004401 2.8e-06 55.8 29 82.8
Psat1g077560 Pisum sativum HOM05D004965 ORTHO05D004401 2.8e-06 55.8 50 60.0
AUR62039441 Chenopodium quinoa HOM05D004965 ORTHO05D004401 3.6e-06 55.5 51 58.8
Sed0010056 Sechium edule HOM05D031204 ORTHO05D004401 3.6e-06 55.5 114 32.5
HanXRQChr08g0209111 Helianthus annuus HOM05D004965 ORTHO05D004401 4.8e-06 55.1 29 86.2
Potri.017G074600 Populus trichocarpa HOM05D004965 ORTHO05D004401 4.8e-06 55.1 50 58.0
Hund13292 Selenicereus undatus HOM05D004965 ORTHO05D004401 4.8e-06 55.1 71 43.7
BcaC08g45847 Brassica carinata HOM05D010176 ORTHO05D012455 6.2e-06 54.7 34 79.4
ATR0665G516 Amborella trichopoda HOM05D004965 ORTHO05D004401 8.1e-06 54.3 31 83.9


User provided reference genes

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