Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G1470 Cannabis sativa HOM05D019351 ORTHO05D018844 1.0e-84 316.6 152 100.0
CANSAT35G0260 Cannabis sativa HOM05D019351 ORTHO05D018844 1.7e-79 299.3 152 96.1
CANSAT01G2426 Cannabis sativa HOM05D019351 ORTHO05D018844 6.5e-31 137.9 65 98.5
Sabra17G0002000 Salix brachista HOM05D008396 ORTHO05D018844 2.6e-19 99.4 141 37.6
Sabra17G0014800 Salix brachista HOM05D008396 ORTHO05D009908 2.6e-19 99.4 141 37.6
Sabra17G0002200 Salix brachista HOM05D000063 ORTHO05D050471 1.6e-16 90.1 146 38.4
Potri.017G018801 Populus trichocarpa HOM05D000455 ORTHO05D050471 1.3e-15 87.0 150 36.7
FAN05G1903 Fragaria x ananassa HOM05D017852 ORTHO05D010823 1.5e-14 83.6 137 35.8
FvH4_6g28332 Fragaria vesca HOM05D017852 ORTHO05D010823 1.9e-14 83.2 139 35.3
Potri.017G019466 Populus trichocarpa HOM05D000030 ORTHO05D000009 1.9e-14 83.2 144 34.7
FvH4_7g31231 Fragaria vesca HOM05D017852 ORTHO05D010823 2.5e-14 82.8 144 34.7
CANSAT56G4506 Cannabis sativa HOM05D019351 ORTHO05D018844 3.3e-14 82.4 40 97.5
FAN27G2266 Fragaria x ananassa HOM05D017852 ORTHO05D010823 3.3e-14 82.4 139 35.3
Ciclev10020105m.g Citrus clementina HOM05D002639 ORTHO05D010823 4.0e-12 75.5 152 30.9
FvH4_2g27910 Fragaria vesca HOM05D004096 ORTHO05D025475 5.2e-12 75.1 110 38.2
FAN09G4395 Fragaria x ananassa HOM05D004096 ORTHO05D025475 5.2e-12 75.1 144 33.3
Ciclev10031514m.g Citrus clementina HOM05D002639 ORTHO05D010823 1.2e-11 73.9 152 31.6
FAN09G4807 Fragaria x ananassa HOM05D004096 ORTHO05D029602 5.7e-11 71.6 123 36.6
Dinv17345 Davidia involucrata HOM05D008396 ORTHO05D000898 2.2e-10 69.7 140 32.1
Dinv01422 Davidia involucrata HOM05D008396 ORTHO05D000898 4.9e-10 68.6 109 31.2
FAN22G0264 Fragaria x ananassa HOM05D004096 ORTHO05D018844 4.9e-10 68.6 110 32.7
FAN24G1357 Fragaria x ananassa HOM05D004096 ORTHO05D012232 1.8e-09 66.6 107 36.4
Manes.10G138200 Manihot esculenta HOM05D000009 ORTHO05D000008 3.2e-09 65.9 109 35.8
Dinv01242 Davidia involucrata HOM05D010363 ORTHO05D008693 4.1e-09 65.5 150 30.0
Hma1.2p1_0359F.1_g135000 Hydrangea macrophylla HOM05D000455 ORTHO05D000434 4.1e-09 65.5 141 29.1
FAN13G0792 Fragaria x ananassa HOM05D017852 ORTHO05D000898 7.0e-09 64.7 139 30.9
FAN25G1002 Fragaria x ananassa HOM05D010142 ORTHO05D012232 1.2e-08 63.9 168 29.2
FAN16G0074 Fragaria x ananassa HOM05D007993 ORTHO05D000898 1.6e-08 63.5 145 33.1
Manes.10G112309 Manihot esculenta HOM05D000009 ORTHO05D000008 3.5e-08 62.4 109 33.9
RcHm_v2.0_Chr3g0451001 Rosa chinensis HOM05D009478 ORTHO05D010213 4.6e-08 62.0 144 29.9
Sopen06g019000 Solanum pennellii HOM05D000541 ORTHO05D000137 5.9e-08 61.6 141 23.4
FvH4_4g05321 Fragaria vesca HOM05D004096 ORTHO05D000898 1.3e-07 60.5 136 30.1
CANSAT64G0311 Cannabis sativa HOM05D009769 ORTHO05D010823 1.7e-07 60.1 153 28.8
FAN05G3432 Fragaria x ananassa HOM05D010142 ORTHO05D012232 1.7e-07 60.1 156 29.5
FAN25G3308 Fragaria x ananassa HOM05D010142 ORTHO05D012232 1.7e-07 60.1 156 29.5
RhsimUnG0240000 Rhododendron simsii HOM05D009719 ORTHO05D011041 2.3e-07 59.7 103 34.0
CANSAT01G0411 Cannabis sativa HOM05D009769 ORTHO05D010823 3.0e-07 59.3 153 28.1
Rhsim12G0083900 Rhododendron simsii HOM05D009719 ORTHO05D011041 3.9e-07 58.9 103 34.0
FAN13G0573 Fragaria x ananassa HOM05D011469 ORTHO05D014217 8.6e-07 57.8 148 29.1
Lj6A677T76 Lonicera japonica HOM05D002639 ORTHO05D003094 1.1e-06 57.4 99 32.3
FAN18G3521 Fragaria x ananassa HOM05D011469 ORTHO05D014217 1.9e-06 56.6 148 29.1
FAN14G0071 Fragaria x ananassa HOM05D007993 ORTHO05D000898 2.5e-06 56.2 143 32.2
FAN28G1618 Fragaria x ananassa HOM05D007993 ORTHO05D000898 2.5e-06 56.2 143 32.2
Mapoly0071s0122 Marchantia polymorpha HOM05D002639 ORTHO05D003094 2.5e-06 56.2 130 28.5
FAN19G1351 Fragaria x ananassa HOM05D007993 ORTHO05D000898 3.3e-06 55.8 143 32.2
Ca_01932_v3 Cicer arietinum L. HOM05D002639 ORTHO05D003094 7.3e-06 54.7 99 30.3
FAN03G2350 Fragaria x ananassa HOM05D007993 ORTHO05D000898 7.3e-06 54.7 143 32.2
GSVIVG01018225001 Vitis vinifera HOM05D008451 ORTHO05D009908 7.3e-06 54.7 108 31.5
CANSAT78G1808 Cannabis sativa HOM05D009769 ORTHO05D010823 9.5e-06 54.3 112 32.1
ECA240G4557 Erigeron canadensis HOM05D002639 ORTHO05D003094 9.5e-06 54.3 99 30.3
FAN04G1460 Fragaria x ananassa HOM05D007993 ORTHO05D000898 9.5e-06 54.3 143 31.5
FAN07G1300 Fragaria x ananassa HOM05D007993 ORTHO05D000898 9.5e-06 54.3 134 32.8
SGA_v2.0_scaffold428G51524 Striga asiatica HOM05D002639 ORTHO05D003094 9.5e-06 54.3 99 33.3


User provided reference genes

Program Settings