Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G1452 Cannabis sativa HOM05D006442 ORTHO05D007980 2.9e-72 275.0 131 100.0
Dinv43911 Davidia involucrata HOM05D006442 ORTHO05D007980 2.6e-60 235.3 133 82.7
Prupe.2G007200 Prunus persica HOM05D006442 ORTHO05D007980 7.5e-60 233.8 133 82.0
Cfa010728 Carpinus fangiana HOM05D006442 ORTHO05D007980 3.7e-59 231.5 133 80.5
Haze_03245 Corylus avellana HOM05D006442 ORTHO05D007980 1.1e-58 229.9 133 80.5
MD07G1004900 Malus domestica HOM05D006442 ORTHO05D007980 1.4e-58 229.6 133 81.2
FvH4_7g00510 Fragaria vesca HOM05D006442 ORTHO05D007980 4.1e-58 228.0 133 78.9
FAN06G2479 Fragaria x ananassa HOM05D006442 ORTHO05D007980 4.1e-58 228.0 133 78.9
FAN10G1890 Fragaria x ananassa HOM05D006442 ORTHO05D007980 4.1e-58 228.0 133 78.9
FAN03G1462 Fragaria x ananassa HOM05D006442 ORTHO05D007980 9.2e-58 226.9 133 78.2
RcHm_v2.0_Chr1g0314301 Rosa chinensis HOM05D006442 ORTHO05D007980 6.0e-57 224.2 133 77.4
Peaxi162Scf00045g00327 Petunia axillaris HOM05D006442 ORTHO05D007980 1.0e-56 223.4 133 76.7
Manes.10G148300 Manihot esculenta HOM05D006442 ORTHO05D007980 1.7e-56 222.6 133 78.2
CiPaw.12G060500 Carya illinoinensis HOM05D006442 ORTHO05D007980 3.0e-56 221.9 132 77.3
Glyma.15G271700 Glycine max HOM05D006442 ORTHO05D007980 3.0e-56 221.9 130 78.5
Cc02_g27370 Coffea canephora HOM05D006442 ORTHO05D007980 6.6e-56 220.7 133 77.4
CAN.G1110.8 Capsicum annuum HOM05D006442 ORTHO05D007980 8.6e-56 220.3 133 76.7
TPR.G12183 Trifolium pratense HOM05D006442 ORTHO05D007980 8.6e-56 220.3 130 78.5
VMungo1080G0583 Vigna mungo HOM05D006442 ORTHO05D007980 1.5e-55 219.5 130 76.9
CSS0016496 Camellia sinensis var. sinensis HOM05D006442 ORTHO05D007980 1.9e-55 219.2 133 76.7
Cc02_g27340 Coffea canephora HOM05D006442 ORTHO05D007980 1.9e-55 219.2 133 75.9
arahy.Tifrunner.gnm1.ann1.9R1925 Arachis hypogaea HOM05D006442 ORTHO05D007980 2.5e-55 218.8 130 76.2
arahy.Tifrunner.gnm1.ann1.A55RA3 Arachis hypogaea HOM05D006442 ORTHO05D007980 2.5e-55 218.8 130 76.2
Lj3g0007274 Lotus japonicus HOM05D006442 ORTHO05D007980 2.5e-55 218.8 130 76.9
Medtr3g027090 Medicago truncatula HOM05D006442 ORTHO05D007980 2.5e-55 218.8 130 77.7
Actinidia20688 Actinidia chinensis HOM05D006442 ORTHO05D007980 3.3e-55 218.4 129 78.3
Eucgr.G03402 Eucalyptus grandis HOM05D006442 ORTHO05D007980 4.3e-55 218.0 133 73.7
Sed0019847 Sechium edule HOM05D006442 ORTHO05D007980 4.3e-55 218.0 134 76.9
VMungo1080G0430 Vigna mungo HOM05D006442 ORTHO05D007980 5.6e-55 217.6 129 76.0
GSVIVG01032037001 Vitis vinifera HOM05D006442 ORTHO05D007980 5.6e-55 217.6 133 75.2
Actinidia21568 Actinidia chinensis HOM05D006442 ORTHO05D007980 9.5e-55 216.9 129 76.7
PGSC0003DMG400026375 Solanum tuberosum HOM05D006442 ORTHO05D007980 9.5e-55 216.9 129 77.5
Lsat_1_v5_gn_8_7620 Lactuca sativa HOM05D006442 ORTHO05D007980 1.2e-54 216.5 130 76.9
Phvul.005G037200 Phaseolus vulgaris HOM05D006442 ORTHO05D007980 1.2e-54 216.5 130 75.4
Glyma.08G151500 Glycine max HOM05D006442 ORTHO05D007980 1.6e-54 216.1 130 76.9
Hma1.2p1_0010F.1_g007050 Hydrangea macrophylla HOM05D006442 ORTHO05D007980 1.6e-54 216.1 130 75.4
TAR633G2790 Trochodendron aralioides HOM05D006442 ORTHO05D007980 1.6e-54 216.1 133 73.7
Potri.001G225500 Populus trichocarpa HOM05D006442 ORTHO05D007980 2.1e-54 215.7 133 75.9
CSS0031684 Camellia sinensis var. sinensis HOM05D006442 ORTHO05D007980 2.8e-54 215.3 130 76.2
Rhsim07G0053100 Rhododendron simsii HOM05D006442 ORTHO05D007980 2.8e-54 215.3 133 75.2
PGR042G3140 Punica granatum HOM05D006442 ORTHO05D007980 4.7e-54 214.5 133 75.2
Sabra16G0134100 Salix brachista HOM05D006442 ORTHO05D007980 4.7e-54 214.5 133 75.9
ECA248G1263 Erigeron canadensis HOM05D006442 ORTHO05D007980 6.2e-54 214.2 133 74.4
HanXRQChr01g0018511 Helianthus annuus HOM05D006442 ORTHO05D007980 8.1e-54 213.8 130 75.4
Solyc10g037980.2 Solanum lycopersicum HOM05D006442 ORTHO05D007980 8.1e-54 213.8 129 76.0
Atru.chr11.2670 Acer truncatum HOM05D006442 ORTHO05D007980 1.1e-53 213.4 130 75.4
Aqoxy1G00188 Aquilegia oxysepala HOM05D006442 ORTHO05D007980 1.1e-53 213.4 133 75.2
Sopen10g011600 Solanum pennellii HOM05D006442 ORTHO05D007980 1.1e-53 213.4 129 76.0
Nn7g36056 Nelumbo nucifera HOM05D006442 ORTHO05D007980 1.4e-53 213.0 133 74.4
Psat5g207000 Pisum sativum HOM05D006442 ORTHO05D007980 1.4e-53 213.0 130 75.4
Oeu064276.1 Olea europaea HOM05D006442 ORTHO05D007980 1.8e-53 212.6 133 73.7
Duzib133G0004 Durio zibethinus HOM05D006442 ORTHO05D007980 2.3e-53 212.2 132 75.0
Gohir.A09G099700 Gossypium hirsutum HOM05D006442 ORTHO05D007980 2.3e-53 212.2 135 74.8
Nitab4.5_0002012g0020 Nicotiana tabacum HOM05D006442 ORTHO05D007980 2.3e-53 212.2 133 74.4
Migut.N01489 Erythranthe guttata HOM05D006442 ORTHO05D007980 3.1e-53 211.8 133 72.9
Gohir.D09G099100 Gossypium hirsutum HOM05D006442 ORTHO05D007980 3.1e-53 211.8 132 75.8
Gorai.006G116100 Gossypium raimondii HOM05D006442 ORTHO05D007980 3.1e-53 211.8 132 75.8
TWI09G1159 Tripterygium wilfordii HOM05D006442 ORTHO05D007980 4.0e-53 211.5 130 74.6
DCAR_006304 Daucus carota HOM05D006442 ORTHO05D007980 5.2e-53 211.1 133 75.9
SalBow5G2051 Salvia bowleyana HOM05D006442 ORTHO05D007980 5.2e-53 211.1 130 73.8
PSO384G2221 Papaver somniferum HOM05D006442 ORTHO05D007980 1.5e-52 209.5 128 71.9
Phvul.005G038700 Phaseolus vulgaris HOM05D006442 ORTHO05D007980 2.6e-52 208.8 129 73.6
PSO339G0425 Papaver somniferum HOM05D006442 ORTHO05D007980 3.4e-52 208.4 128 71.1
CDE07G0477 Ceratophyllum demersum HOM05D006442 ORTHO05D007980 9.9e-52 206.8 130 70.8
Oeu013593.2 Olea europaea HOM05D006442 ORTHO05D007980 1.3e-51 206.5 133 70.7
MSTRG.28085 Avicennia marina HOM05D006442 ORTHO05D007980 1.7e-51 206.1 133 70.7
Ciclev10033058m.g Citrus clementina HOM05D006442 ORTHO05D007980 1.7e-51 206.1 133 71.4
QL04p004786 Quercus lobata HOM05D006442 ORTHO05D007980 1.7e-51 206.1 174 60.9
Sc14g0005190 Simmondsia chinensis HOM05D006442 ORTHO05D007980 4.9e-51 204.5 130 71.5
SGA_v2.0_scaffold4G02243 Striga asiatica HOM05D006442 ORTHO05D007980 8.4e-51 203.8 133 72.9
CAN.G1076.12 Capsicum annuum HOM05D006442 ORTHO05D007980 1.4e-50 203.0 133 73.7
Ah.16g101020 Amaranthus hybridus HOM05D006442 ORTHO05D007980 2.4e-50 202.2 130 70.0
AUR62009476 Chenopodium quinoa HOM05D006442 ORTHO05D007980 7.1e-50 200.7 129 70.5
Lalb_Chr25g0283271 Lupinus albus HOM05D006442 ORTHO05D007980 7.1e-50 200.7 130 71.5
AUR62023154 Chenopodium quinoa HOM05D006442 ORTHO05D007980 9.2e-50 200.3 129 69.8
Nn2g15582 Nelumbo nucifera HOM05D006442 ORTHO05D007980 9.2e-50 200.3 129 71.3
unitig_22.g5766 Utricularia gibba HOM05D006442 ORTHO05D007980 7.8e-49 197.2 131 69.5
SGA_v2.0_scaffold10G05439 Striga asiatica HOM05D006442 ORTHO05D007980 1.0e-48 196.8 133 69.9
Thecc.01G414800 Theobroma cacao HOM05D006442 ORTHO05D007980 3.0e-48 195.3 132 72.0
EL10Ac2g04436 Beta vulgaris HOM05D006442 ORTHO05D007980 8.6e-48 193.7 130 66.9
COL.COLO4_23906 Corchorus olitorius HOM05D006442 ORTHO05D007980 2.5e-47 192.2 134 69.4
Atru.chr11.2672 Acer truncatum HOM05D006442 ORTHO05D007980 7.6e-44 180.6 103 79.6
AUR62009477 Chenopodium quinoa HOM05D006442 ORTHO05D007980 7.6e-44 180.6 129 62.8
AL8G18110 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 9.9e-44 180.3 131 63.4
THA.LOC104823024 Tarenaya hassleriana HOM05D006442 ORTHO05D007980 1.3e-43 179.9 133 64.7
AT5G42850 Arabidopsis thaliana HOM05D006442 ORTHO05D007980 1.7e-43 179.5 131 62.6
BcaC06g31744 Brassica carinata HOM05D006442 ORTHO05D007980 2.9e-43 178.7 131 61.1
A06p48230 Brassica napus HOM05D006442 ORTHO05D007980 2.9e-43 178.7 131 60.3
BraA06t27691Z Brassica rapa HOM05D006442 ORTHO05D007980 2.9e-43 178.7 131 60.3
BcaC02g10802 Brassica carinata HOM05D006442 ORTHO05D007980 6.4e-43 177.6 131 59.5
C04p24990 Brassica napus HOM05D006442 ORTHO05D007980 6.4e-43 177.6 131 59.5
BolC4t23999H Brassica oleracea HOM05D006442 ORTHO05D007980 6.4e-43 177.6 131 59.5
Sp2g07550 Schrenkiella parvula HOM05D006442 ORTHO05D007980 6.4e-43 177.6 133 60.2
AUR62023155 Chenopodium quinoa HOM05D006442 ORTHO05D007980 1.1e-42 176.8 129 62.0
Carub.0008s0607 Capsella rubella HOM05D006442 ORTHO05D007980 1.9e-42 176.0 131 61.1
Ca_27853_v3 Cicer arietinum L. HOM05D006442 ORTHO05D007980 1.9e-42 176.0 224 44.2
Thhalv10003289m.g Eutrema salsugineum HOM05D006442 ORTHO05D007980 3.2e-42 175.3 131 61.1
HPP92_018950 Vanilla planifolia HOM05D006442 ORTHO05D007980 4.2e-42 174.9 129 63.6
Glyma.08G152300 Glycine max HOM05D006442 ORTHO05D007980 3.5e-41 171.8 128 60.9
CARHR181310 Cardamine hirsuta HOM05D006442 ORTHO05D007980 4.6e-41 171.4 133 57.9
SEGI_10267 Sequoiadendron giganteum HOM05D006442 ORTHO05D007980 1.3e-38 163.3 124 57.3
ATR0605G011 Amborella trichopoda HOM05D006442 ORTHO05D007980 6.2e-38 161.0 129 57.4
vmacro13638 Vaccinium macrocarpon HOM05D006442 ORTHO05D007980 6.2e-38 161.0 156 54.5
Zm00001eb381670 Zea mays HOM05D006442 ORTHO05D007980 2.4e-37 159.1 133 59.4
Aa31LG8G5740 Aethionema arabicum HOM05D000097 ORTHO05D000041 3.1e-37 158.7 132 55.3
Mapoly0028s0130 Marchantia polymorpha HOM05D006442 ORTHO05D007980 4.0e-37 158.3 128 55.5
Os06g0320000 Oryza sativa ssp. japonica HOM05D006442 ORTHO05D007980 3.4e-36 155.2 135 54.1
CsaV3_3G032370 Cucumis sativus L. HOM05D006442 ORTHO05D007980 2.9e-35 152.1 85 81.2
MBI01_g15755_MAGBIO Magnolia biondii HOM05D006442 ORTHO05D007980 2.9e-35 152.1 85 78.8
AagrBONN_evm.TU.Sc2ySwM_117.1593 Anthoceros agrestis HOM05D006442 ORTHO05D007980 3.8e-35 151.8 127 52.8
SMO244G0064 Selaginella moellendorffii HOM05D006442 ORTHO05D007980 1.9e-34 149.4 127 51.2
Pp3c1_3150 Physcomitrium patens HOM05D006442 ORTHO05D007980 7.1e-34 147.5 127 52.8
Nitab4.5_0004606g0020 Nicotiana tabacum HOM05D006442 ORTHO05D007980 1.1e-31 140.2 83 75.9
CAN.G37.7 Capsicum annuum HOM05D006442 ORTHO05D007980 1.4e-29 133.3 102 59.8
ClCG10G012580 Citrullus lanatus HOM05D002156 ORTHO05D002328 5.8e-28 127.9 136 51.5
MD02G1317000 Malus domestica HOM05D006442 ORTHO05D007980 3.8e-27 125.2 67 83.6
CBR_g40140 Chara braunii HOM05D006442 ORTHO05D007980 1.1e-23 113.6 115 52.2
CAN.G290.22 Capsicum annuum HOM05D006442 ORTHO05D007980 1.1e-18 97.1 56 69.6
MD01G1062200 Malus domestica HOM05D006442 ORTHO05D007980 5.5e-18 94.7 72 66.7
Aa31LG8G5750 Aethionema arabicum HOM05D006442 ORTHO05D007980 1.3e-16 90.1 124 40.3
AL8G12830 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 3.8e-11 72.0 64 56.2
AL5G40550 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 7.2e-10 67.8 58 58.6
MELO3C023952.2 Cucumis melo HOM05D002156 ORTHO05D002328 9.3e-10 67.4 48 66.7
CsaV3_3G032380 Cucumis sativus L. HOM05D002156 ORTHO05D002328 1.2e-09 67.0 48 66.7
MD00G1052400 Malus domestica HOM05D006442 ORTHO05D007980 7.4e-07 57.8 43 65.1


User provided reference genes

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