Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G1417 Cannabis sativa HOM05D008367 ORTHO05D010529 4.4e-104 381.3 195 100.0
MD05G1197200 Malus domestica HOM05D008367 ORTHO05D010529 2.1e-21 106.7 204 44.1
QL09p038772 Quercus lobata HOM05D008367 ORTHO05D010529 1.3e-20 104.0 207 37.2
Sabra02G0030800 Salix brachista HOM05D008367 ORTHO05D010529 1.8e-20 103.6 200 43.0
Sabra05G0173000 Salix brachista HOM05D008367 ORTHO05D010529 1.8e-20 103.6 198 40.4
Potri.002G038400 Populus trichocarpa HOM05D008367 ORTHO05D010529 2.3e-20 103.2 201 42.3
Gohir.D07G155080 Gossypium hirsutum HOM05D008367 ORTHO05D010529 9.6e-19 97.8 191 38.7
Gorai.001G177400 Gossypium raimondii HOM05D008367 ORTHO05D010529 9.6e-19 97.8 191 38.7
Gohir.A07G148700 Gossypium hirsutum HOM05D008367 ORTHO05D010529 2.1e-18 96.7 191 38.2
Duzib138G1787 Durio zibethinus HOM05D008367 ORTHO05D010529 6.2e-18 95.1 207 40.1
Prupe.8G223700 Prunus persica HOM05D008367 ORTHO05D010529 3.1e-17 92.8 197 38.6
Ciclev10022407m.g Citrus clementina HOM05D008367 ORTHO05D010529 5.3e-17 92.0 199 37.2
Haze_24631 Corylus avellana HOM05D008367 ORTHO05D010529 6.9e-17 91.7 187 39.6
Cfa002424 Carpinus fangiana HOM05D008367 ORTHO05D010529 9.0e-17 91.3 187 38.0
Manes.13G034100 Manihot esculenta HOM05D008367 ORTHO05D010529 9.0e-17 91.3 198 37.9
Thecc.01G258200 Theobroma cacao HOM05D008367 ORTHO05D010529 9.0e-17 91.3 205 37.6
Duzib133G0413 Durio zibethinus HOM05D008367 ORTHO05D010529 2.0e-16 90.1 206 39.3
RcHm_v2.0_Chr6g0288121 Rosa chinensis HOM05D008367 ORTHO05D010529 5.8e-16 88.6 204 37.7
Potri.005G224200 Populus trichocarpa HOM05D008367 ORTHO05D010529 7.6e-16 88.2 198 38.4
COL.COLO4_05894 Corchorus olitorius HOM05D008367 ORTHO05D010529 2.9e-15 86.3 196 36.2
FAN27G3501 Fragaria x ananassa HOM05D004208 ORTHO05D005156 8.4e-15 84.7 207 37.2
Lj1g0003464 Lotus japonicus HOM05D008367 ORTHO05D010529 1.6e-13 80.5 218 37.2
Medtr7g096950 Medicago truncatula HOM05D008367 ORTHO05D010529 2.1e-13 80.1 197 31.0
CiPaw.03G264200 Carya illinoinensis HOM05D008367 ORTHO05D010529 2.7e-13 79.7 203 37.4
Lalb_Chr01g0012251 Lupinus albus HOM05D008367 ORTHO05D010529 2.7e-13 79.7 191 35.6
FvH4_2g21490 Fragaria vesca HOM05D008367 ORTHO05D010529 3.5e-13 79.3 202 35.1
Cc01_g18350 Coffea canephora HOM05D008367 ORTHO05D010529 1.8e-12 77.0 214 34.6
Atru.chr5.1688 Acer truncatum HOM05D008367 ORTHO05D010529 2.3e-12 76.6 190 35.3
FAN20G2986 Fragaria x ananassa HOM05D004208 ORTHO05D005156 2.3e-12 76.6 199 36.2
Ca_08676_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 8.7e-12 74.7 198 34.8
Eucgr.B01554 Eucalyptus grandis HOM05D008367 ORTHO05D010529 2.5e-11 73.2 186 31.2
Psat3g056920 Pisum sativum HOM05D008367 ORTHO05D010529 2.5e-11 73.2 202 34.2
Ca_08702_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 4.3e-11 72.4 191 33.0
Actinidia25788 Actinidia chinensis HOM05D008367 ORTHO05D010529 9.6e-11 71.2 195 34.4
Ca_08710_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 1.3e-10 70.9 198 34.3
FAN24G2300 Fragaria x ananassa HOM05D004208 ORTHO05D005156 2.8e-10 69.7 186 33.9
Hma1.2p1_0576F.1_g182070 Hydrangea macrophylla HOM05D008367 ORTHO05D010529 2.8e-10 69.7 192 32.3
Glyma.03G163200 Glycine max HOM05D008367 ORTHO05D010529 3.7e-10 69.3 196 34.7
Rhsim13G0035000 Rhododendron simsii HOM05D008367 ORTHO05D010529 6.2e-10 68.6 212 33.5
RcHm_v2.0_Chr4g0393211 Rosa chinensis HOM05D007526 ORTHO05D009350 1.1e-09 67.8 194 28.9
Atru.chr4.2058 Acer truncatum HOM05D007526 ORTHO05D009350 1.4e-09 67.4 185 29.7
Oeu025845.1 Olea europaea HOM05D008367 ORTHO05D010529 1.8e-09 67.0 202 31.7
Cpa.g.sc165.10 Carica papaya HOM05D008367 ORTHO05D010529 2.4e-09 66.6 193 35.2
CAN.G896.7 Capsicum annuum HOM05D008367 ORTHO05D010529 3.1e-09 66.2 201 31.3
Migut.N02203 Erythranthe guttata HOM05D008367 ORTHO05D010529 3.1e-09 66.2 207 36.2
Rhsim01G0263900 Rhododendron simsii HOM05D008367 ORTHO05D010529 3.1e-09 66.2 214 29.0
FvH4_4g03670 Fragaria vesca HOM05D007526 ORTHO05D009350 5.3e-09 65.5 195 28.2
FAN12G2381 Fragaria x ananassa HOM05D007526 ORTHO05D009350 5.3e-09 65.5 194 27.8
Nitab4.5_0000470g0140 Nicotiana tabacum HOM05D008367 ORTHO05D010529 5.3e-09 65.5 200 33.5
VMungo1383G3617 Vigna mungo HOM05D008367 ORTHO05D010529 5.3e-09 65.5 194 36.1
Actinidia09550 Actinidia chinensis HOM05D008367 ORTHO05D010529 6.9e-09 65.1 192 32.8
Glyma.19G164700 Glycine max HOM05D008367 ORTHO05D010529 6.9e-09 65.1 194 33.5
Hma1.2p1_0273F.1_g109700 Hydrangea macrophylla HOM05D008367 ORTHO05D010529 6.9e-09 65.1 213 30.0
MD13G1214200 Malus domestica HOM05D007526 ORTHO05D009350 2.6e-08 63.2 190 26.8
Phvul.001G161100 Phaseolus vulgaris HOM05D008367 ORTHO05D010529 3.4e-08 62.8 194 33.5
Prupe.1G039600 Prunus persica HOM05D007526 ORTHO05D009350 5.8e-08 62.0 194 28.4
Rhsim13G0034900 Rhododendron simsii HOM05D009321 ORTHO05D010529 5.8e-08 62.0 45 57.8
Ciclev10005975m.g Citrus clementina HOM05D007526 ORTHO05D009350 1.3e-07 60.8 197 31.0
MBI07_g16245_MAGBIO Magnolia biondii HOM05D007526 ORTHO05D009350 2.9e-07 59.7 169 35.5
Sopen09g028370 Solanum pennellii HOM05D008367 ORTHO05D010529 2.9e-07 59.7 186 32.8
PGSC0003DMG400010298 Solanum tuberosum HOM05D008367 ORTHO05D010529 2.9e-07 59.7 186 33.3
CiPaw.01G184600 Carya illinoinensis HOM05D007526 ORTHO05D009350 8.4e-07 58.2 191 27.7
FAN17G0331 Fragaria x ananassa HOM05D007526 ORTHO05D009350 8.4e-07 58.2 184 25.0
Ah.04g155760 Amaranthus hybridus HOM05D007526 ORTHO05D009350 1.9e-06 57.0 212 26.9
Dinv22407 Davidia involucrata HOM05D008367 ORTHO05D010529 2.5e-06 56.6 108 35.2
MD16G1219200 Malus domestica HOM05D007526 ORTHO05D009350 7.1e-06 55.1 203 26.6


User provided reference genes

Program Settings